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Original Articles

Binding Regularities in Complexes of Transcription Factors with Operator DNA: Homeodomain Family

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Pages 687-700 | Received 01 Dec 2008, Published online: 15 May 2012

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Y.N. Chirgadze, E.A. Boshkova, R.V. Polozov, V.S. Sivozhelezov, A.V. Dzyabchenko, M.B. Kuzminsky, V.A. Stepanenko & V.V. Ivanov. (2018) The electrostatic role of the Zn-Cys2His2 complex in binding of operator DNA with transcription factors: mouse EGR-1 from the Cys2His2 family. Journal of Biomolecular Structure and Dynamics 36:15, pages 3902-3915.
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R.V. Polozov, V.S. Sivozhelezov, Yu.N. Chirgadze & V.V. Ivanov. (2015) Recognition rules for binding of Zn-Cys2His2 transcription factors to operator DNA. Journal of Biomolecular Structure and Dynamics 33:2, pages 253-266.
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Yu.N. Chirgadze, V.S. Sivozhelezov, R.V. Polozov, V.A. Stepanenko & V.V. Ivanov. (2012) Recognition Rules for Binding of Homeodomains to Operator DNA. Journal of Biomolecular Structure and Dynamics 29:4, pages 715-731.
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Deok-Soo Kim, Chung-In Won & Jong Bhak. (2010) A Proposal for the Revision of Molecular Boundary Typology. Journal of Biomolecular Structure and Dynamics 28:2, pages 277-287.
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I.A. Il'icheva, P.K. Vlasov, N.G. Esipova & V.G. Tumanyan. (2010) The Intramolecular Impact to the Sequence Specificity of B→A Transition: Low Energy Conformational Variations in AA/TT and GG/CC Steps. Journal of Biomolecular Structure and Dynamics 27:5, pages 677-693.
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T. I. Grokhlina, P. V. Zrelov, V. V. Ivanov, R. V. Polozov, Yu. N. Chirgadze & V. S. Sivozhelezov. (2013) Database of amino acid-nucleotide contacts in contacts in DNA-homeodomain protein. Physics of Particles and Nuclei Letters 10:5, pages 464-468.
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Al'ona Furmanchuk, Oleg V. Shishkin, Olexandr Isayev, Leonid Gorb & Jerzy Leszczynski. (2010) New insight on structural properties of hydrated nucleic acid bases from ab initio molecular dynamics. Physical Chemistry Chemical Physics 12:33, pages 9945.
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