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Journal of Biomolecular Structure and Dynamics Volume 34, 2016 - Issue 6
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Original Articles

The effects of tautomerization and protonation on the adenine–cytosine mismatches: a density functional theory study

Hamid Reza MasoodiFaculty of Science, Department of Chemistry, Vali-e-Asr University of Rafsanjan, P.O. Box 77176, Rafsanjan, IranCorrespondence[email protected]
,
Sotoodeh BagheriFaculty of Science, Department of Chemistry, Vali-e-Asr University of Rafsanjan, P.O. Box 77176, Rafsanjan, Iran
&
Mahsa AbareghiFaculty of Science, Department of Chemistry, Vali-e-Asr University of Rafsanjan, P.O. Box 77176, Rafsanjan, Iran
Pages 1143-1155 | Received 17 Apr 2015, Accepted 11 Jul 2015, Published online: 17 Aug 2015

Citations (12)

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Read on this site (2)

Zahra Anvari, Hamid Reza Masoodi & Sotoodeh Bagheri. (2020) DFT simulation of Watson–Crick-like guanine–thymine mismatch in quaternary systems involving DNA bases. Molecular Simulation 46:3, pages 186-192.
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Hamid Reza Masoodi, Sotoodeh Bagheri & Zahra Ghaderi. (2019) The influence of Cu+ binding to hypoxanthine on stabilization of mismatches involving hypoxanthine and DNA bases: a DFT study. Journal of Biomolecular Structure and Dynamics 37:8, pages 1923-1934.
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Articles from other publishers (10)

Suzana P. Gelova & Kin Chan. (2023) Mutagenesis induced by protonation of single-stranded DNA is linked to glycolytic sugar metabolism. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 826, pages 111814.
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Mahanish J Thapa, Reena M Fabros, Salma Alasmar & Kin Chan. (2022) Analyses of mutational patterns induced by formaldehyde and acetaldehyde reveal similarity to a common mutational signature. G3 Genes|Genomes|Genetics 12:11.
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Suzana P Gelova, Kassidy N Doherty, Salma Alasmar & Kin Chan. (2022) Intrinsic base substitution patterns in diverse species reveal links to cancer and metabolism. Genetics 222:3.
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Sara Asadi, Hamid Reza Masoodi & Hossein Mehrabi. (2021) Theoretical insights of solvent effect on tautomerism, stability, and electronic properties of 6‐ketomethylphenanthridine. Journal of Physical Organic Chemistry 35:2.
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Wei Li, Hongmei Yang, Yafen Wang, Xiaocheng Weng & Fang Wang. (2021) Highly sensitive detection of 6mA at single-base resolution based on A–C mismatch. The Analyst 146:14, pages 4450-4453.
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Sotoodeh Bagheri. (2020) Theoretical study of hydrogen bonds and electronic properties in hexagonal arrangements composed of self-assembled DNA analogues. Structural Chemistry 31:5, pages 2075-2085.
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. (2020) Hydrogen bonding and DNA: 66-year retrospective (briefly). Biophysical Bulletin:43.
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Hamid Reza Masoodi, Sotoodeh Bagheri & Zahra Anvari. (2018) DFT study of adenine–cytosine mismatch in quaternary systems involving DNA bases. Structural Chemistry 30:3, pages 1023-1031.
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Ankur Garg & Udo Heinemann. (2018) A novel form of RNA double helix based on G·U and C·A + wobble base pairing . RNA 24:2, pages 209-218.
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Lindey R. Felske, Stefan A. P. Lenz & Stacey D. Wetmore. (2017) Quantum Chemical Studies of the Structure and Stability of N-Methylated DNA Nucleobase Dimers: Insights into the Mutagenic Base Pairing of Damaged DNA. The Journal of Physical Chemistry A 122:1, pages 410-419.
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