323
Views
16
CrossRef citations to date
0
Altmetric
Research Articles

A coupling of homology modeling with multiple molecular dynamics simulation for identifying representative conformation of GPCR structures: a case study on human bombesin receptor subtype-3

&
Pages 250-272 | Received 03 Oct 2015, Accepted 07 Jan 2016, Published online: 11 May 2016

Keep up to date with the latest research on this topic with citation updates for this article.

Read on this site (6)

Brenda de Souza Ferrari, Camilo Henrique da Silva Lima & Magaly Girão Albuquerque. (2023) Development, validation and analysis of a human profurin 3D model using comparative modeling and molecular dynamics simulations. Journal of Biomolecular Structure and Dynamics 0:0, pages 1-19.
Read now
Wenyuan Zhang, Songjuan Zhuang, Hui Guan, Feng Li, Hui Zou & Dapeng Li. (2023) New insights into the anti-apoptotic mechanism of natural polyphenols in complex with Bax protein. Journal of Biomolecular Structure and Dynamics 0:0, pages 1-13.
Read now
Cecylia S. Lupala, Bahareh Rasaeifar, Patricia Gomez-Gutierrez & Juan J. Perez. (2018) Using molecular dynamics for the refinement of atomistic models of GPCRs by homology modeling. Journal of Biomolecular Structure and Dynamics 36:9, pages 2436-2448.
Read now
Fataneh Jafari, Setareh Samadi, Amin Nowroozi, Komail Sadrjavadi, Sajad Moradi, Mohammad Reza Ashrafi-Kooshk & Mohsen Shahlaei. (2018) Experimental and computational studies on the binding of diazinon to human serum albumin. Journal of Biomolecular Structure and Dynamics 36:6, pages 1490-1510.
Read now
Wei Xie, Ming Wang, Aijing Li & Si-Chuan Xu. (2017) Molecular dynamics simulation of d-Benzedrine transmitting through molecular channels within D3R. Journal of Biomolecular Structure and Dynamics 35:8, pages 1672-1684.
Read now
Masomeh Mehrabi, Reza Khodarahmi & Mohsen Shahlaei. (2017) Critical effects on binding of epidermal growth factor produced by amino acid substitutions. Journal of Biomolecular Structure and Dynamics 35:5, pages 1085-1101.
Read now

Articles from other publishers (10)

Ekin Kestevur Doğru, Gülce Güralp, Arzu Uyar & Nur Basak Surmeli. (2023) Rational design of thermophilic CYP119 for progesterone hydroxylation by in silico mutagenesis and docking screening. Journal of Molecular Graphics and Modelling 118, pages 108323.
Crossref
Guohua Zhu & Haizhou Wang. (2022) Empirical Study of Large-Scale HLA Simulation of Parallel Region-Matching Knowledge Recognition Algorithm Based on Region Matching. Computational Intelligence and Neuroscience 2022, pages 1-9.
Crossref
Sajad Moradi, Parisa Moradi, Mohabbat Ansari, Rasool Khosravi, Negin Farhadian, Nasim Batooie & Mohsen Shahlaei. (2021) Investigating the protective effects of carbohydrate coatings on the structure and dynamic of l‐asparaginase against heat stress; a molecular dynamic simulation. Informatics in Medicine Unlocked 25, pages 100689.
Crossref
Mastaneh Shokri, Sajad Moradi, Sabrieh Amini, Mohsen Shahlaei, Farzad Seidi & Shahab Saedi. (2021) A novel amino cellulose derivative using ATRP method: Preparation, characterization, and investigation of its antibacterial activity. Bioorganic Chemistry 106, pages 104355.
Crossref
Zsófia Borbála Rózsa, Lukács József Németh, Balázs Jójárt, Károly Nehéz, Béla Viskolcz & Milán Szőri. (2019) Molecular Dynamics and Metadynamics Insights of 1,4-Dioxane-Induced Structural Changes of Biomembrane Models. The Journal of Physical Chemistry B 123:37, pages 7869-7884.
Crossref
Sajad Moradi, Amin Nowroozi & Mohsen Shahlaei. (2019) Shedding light on the structural properties of lipid bilayers using molecular dynamics simulation: a review study. RSC Advances 9:8, pages 4644-4658.
Crossref
Sajad Moradi, Elnaz Hosseini, Mohadese Abdoli, Solmaz Khani & Mohsen Shahlaei. (2019) Comparative molecular dynamic simulation study on the use of chitosan for temperature stabilization of interferon αII. Carbohydrate Polymers 203, pages 52-59.
Crossref
Seyed Zachariah Moradi, Amin Nowroozi, Komail Sadrjavadi, Sajad Moradi, Kamran Mansouri, Leila Hosseinzadeh & Mohsen Shahlaei. (2018) Direct evidences for the groove binding of the Clomifene to double stranded DNA. International Journal of Biological Macromolecules 114, pages 40-53.
Crossref
Tao Liang, Yuan Yuan, Ran Wang, Yanzhi Guo, Menglong Li, Xuemei Pu & Chuan Li. (2017) Structural Features and Ligand Selectivity for 10 Intermediates in the Activation Process of β 2 -Adrenergic Receptor . ACS Omega 2:12, pages 8557-8567.
Crossref
James A. R. Dalton, Jean-Philippe Pin & Jesús Giraldo. (2017) Analysis of positive and negative allosteric modulation in metabotropic glutamate receptors 4 and 5 with a dual ligand. Scientific Reports 7:1.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.