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Research Articles

Effect of pH on structure, function, and stability of mitochondrial carbonic anhydrase VA

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Pages 449-461 | Received 06 Jan 2016, Accepted 28 Jan 2016, Published online: 04 Apr 2016

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Pulala Raghuveer Yadav, Syed Hussain Basha & Pavan Kumar Pindi. (2022) Role of Thr199 residue in human β-carbonic anhydrase-II pH-dependent activity elucidated by microsecond simulation analysis. Journal of Biomolecular Structure and Dynamics 40:11, pages 5016-5025.
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Amarjyoti Das Mahapatra, Aarfa Queen, Mohd Yousuf, Parvez Khan, Afzal Hussain, Md. Tabish Rehman, Mohamed F. Alajmi, Bhaskar Datta & Md. Imtaiyaz Hassan. (2022) Design and development of 5-(4H)-oxazolones as potential inhibitors of human carbonic anhydrase VA: towards therapeutic management of diabetes and obesity. Journal of Biomolecular Structure and Dynamics 40:7, pages 3144-3154.
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Khalid A. Alamry, Saurabha Srivastava, Mohd Shahbaaz, Parvez Khan, Preeti Gupta, Sunayana Begum Syed, Naved Azum, Abdullah M. Asiri, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2021) Unravelling the unfolding pathway of human Fas-activated serine/threonine kinase induced by urea. Journal of Biomolecular Structure and Dynamics 39:15, pages 5516-5525.
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Mohd Shahbaaz, Vladimir Potemkin, Maria Grishina, Krishna Bisetty & Imtaiyaz Hassan. (2020) The structural basis of acid resistance in Mycobacterium tuberculosis: insights from multiple pH regime molecular dynamics simulations. Journal of Biomolecular Structure and Dynamics 38:15, pages 4483-4492.
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Saman Fatima, Taj Mohammad, Deeba Shamim Jairajpuri, Md Tabish Rehman, Afzal Hussain, Mohammed Samim, Farhan Jalees Ahmad, Mohammed F. Alajmi & Md. Imtaiyaz Hassan. (2020) Identification and evaluation of glutathione conjugate gamma-l-glutamyl-l-cysteine for improved drug delivery to the brain. Journal of Biomolecular Structure and Dynamics 38:12, pages 3610-3620.
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Sunayana Begum Syed, Mohd Shahbaaz, Sabab Hassan Khan, Saurabha Srivastava, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2019) Estimation of pH effect on the structure and stability of kinase domain of human integrin-linked kinase. Journal of Biomolecular Structure and Dynamics 37:1, pages 156-165.
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Parvez Khan, Ashutosh Shandilya, B. Jayaram, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2017) Effect of pH on the stability of hemochromatosis factor E: a combined spectroscopic and molecular dynamics simulation-based study. Journal of Biomolecular Structure and Dynamics 35:7, pages 1582-1598.
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Amresh Prakash, Danish Idrees, Md. Anzarul Haque, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2017) GdmCl-induced unfolding studies of human carbonic anhydrase IX: a combined spectroscopic and MD simulation approach. Journal of Biomolecular Structure and Dynamics 35:6, pages 1295-1306.
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Articles from other publishers (18)

Yeon Hee Ro, Kwang Young Kim, Soon Kwan Jeong, Geun Bae Rhim, Dae Hyun Moon, Jun Eo, Hyeon Song Lee, Gyoung Woo Lee, Bo Young Lim, Dong Hyun Chun, Jinwon Park & Min Hye Youn. (2023) Membrane-separated reactor for an integrated CO2 capture-mineralization process using carbonic anhydrase. Chemical Engineering Journal 477, pages 146847.
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Wilson Mwandira, Diane Purchase, Maria Mavroulidou & Michael J. Gunn. (2023) Synthesis and Utilisation of Hybrid Metal-Carbonic Anhydrase Enzyme Carrier System for Soil Biocementation. Applied Sciences 13:17, pages 9494.
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Jiwoong Heo, Moonhyun Choi, Seung Yeon Rhyu, Hyeji Lee, Sungwon Jung, Youna Kim, Woojin Choi, Kyungtae Park, Younghyun Cho, Sang Wook Kang, Sangmin Lee & Jinkee Hong. (2023) Enzyme-based CO2/N2 separation nano-membrane via optimization of carbonic anhydrase-functionalized graphene oxide. Applied Surface Science 619, pages 156742.
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Laura De Luca, Andrea Angeli, Federico Ricci, Claudiu T. Supuran & Rosaria Gitto. (2022) Structure‐guided identification of a selective sulfonamide‐based inhibitor targeting the human carbonic anhydrase VA isoform. Archiv der Pharmazie 356:1.
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Mohammad Mahmoudi Gomari, Neda Rostami, Davood Rabiei Faradonbeh, Hamid Reza Asemaneh, Giti Esmailnia, Shahriar Arab, Marziye Farsimadan, Arshad Hosseini & Nikolay V. Dokholyan. (2022) Evaluation of pH change effects on the HSA folding and its drug binding characteristics, a computational biology investigation. Proteins: Structure, Function, and Bioinformatics 90:11, pages 1908-1925.
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Danish Idrees, Ahmad Abu Turab Naqvi, Md Imtaiyaz Hassan, Faizan Ahmad & Samudrala Gourinath. (2022) Insight into the Conformational Transitions of Serine Acetyl Transferase Isoforms in E. histolytica : Implications for Structural and Functional Balance . ACS Omega 7:28, pages 24626-24637.
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Rashid Waseem, Anas Shamsi, Mohd Shahbaz, Tanzeel Khan, Syed Naqui Kazim, Faizan Ahmad, Md. Imtaiyaz Hassan & Asimul Islam. (2022) Effect of pH on the structure and stability of irisin, a multifunctional protein: Multispectroscopic and molecular dynamics simulation approach. Journal of Molecular Structure 1252, pages 132141.
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Farah Anjum, Fatima AliTaj Mohammad, Alaa Shafie, Omar AkhtarBekhzod AbdullaevImtaiyaz Hassan. (2021) Discovery of Natural Compounds as Potential Inhibitors of Human Carbonic Anhydrase II: An Integrated Virtual Screening, Docking, and Molecular Dynamics Simulation Study. OMICS: A Journal of Integrative Biology 25:8, pages 513-524.
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Shubham Kumar, Sandeep Rulhania, Shalini Jaswal & Vikramdeep Monga. (2021) Recent advances in the medicinal chemistry of carbonic anhydrase inhibitors. European Journal of Medicinal Chemistry 209, pages 112923.
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Yucong Zou, Xuan Xin, Haixia Xu, Hongwei Yuan, Xiaofeng Li, Yigang Yu & Guanglei Zhao. (2020) Highly efficient bioconversion of flavonoid glycosides from citrus-processing wastes in solvent-buffer systems. Green Chemistry 22:10, pages 3196-3207.
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Rohit Bansal, Md. Anzarul Haque, Md. Imtaiyaz Hassan, Abdul S. Ethayathulla & Punit Kaur. (2020) Structural and conformational behavior of MurE ligase from Salmonella enterica serovar Typhi at different temperature and pH conditions. International Journal of Biological Macromolecules 150, pages 389-399.
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Saleha Anwar, Rajiv K. Kar, Md. Anzarul Haque, Rashmi Dahiya, Preeti Gupta, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2020) Effect of pH on the structure and function of pyruvate dehydrogenase kinase 3: Combined spectroscopic and MD simulation studies. International Journal of Biological Macromolecules 147, pages 768-777.
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Taj Mohammad, Sagar Batra, Rashmi Dahiya, Mohammad Hassan Baig, Irfan Ahmad Rather, Jae-June Dong & Imtaiyaz Hassan. (2019) Identification of High-Affinity Inhibitors of Cyclin-Dependent Kinase 2 Towards Anticancer Therapy. Molecules 24:24, pages 4589.
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Danish Idrees, Murtuza Hadianawala, Amarjyoti Das Mahapatra, Bhaskar Datta, Sonam Roy, Shahzaib Ahamad, Parvez Khan & Md. Imtaiyaz Hassan. (2018) Implication of sulfonylurea derivatives as prospective inhibitors of human carbonic anhydrase II. International Journal of Biological Macromolecules 115, pages 961-969.
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Sunayana Begum Syed, Faez Iqbal Khan, Sabab Hasan Khan, Saurabha Srivastava, Gulam Mustafa Hasan, Kevin A. Lobb, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2018) Mechanistic insights into the urea-induced denaturation of kinase domain of human integrin linked kinase. International Journal of Biological Macromolecules 111, pages 208-218.
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Aarfa Queen, Parvez Khan, Danish Idrees, Amir Azam & Md. Imtaiyaz Hassan. (2018) Biological evaluation of p-toluene sulphonylhydrazone as carbonic anhydrase IX inhibitors: An approach to fight hypoxia-induced tumors. International Journal of Biological Macromolecules 106, pages 840-850.
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Danish Idrees, Safikur Rahman, Mohd. Shahbaaz, Md. Anzarul Haque, Asimul Islam, Faizan Ahmad & Md. Imtaiyaz Hassan. (2017) Estimation of thermodynamic stability of human carbonic anhydrase IX from urea-induced denaturation and MD simulation studies. International Journal of Biological Macromolecules 105, pages 183-189.
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Wahiduzzaman, Mohammad Aasif Dar, Md. Anzarul Haque, Danish Idrees, Md. Imtaiyaz Hassan, Asimul Islam & Faizan Ahmad. (2017) Characterization of folding intermediates during urea-induced denaturation of human carbonic anhydrase II. International Journal of Biological Macromolecules 95, pages 881-887.
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