Advanced search
Publication Cover
Journal of Biomolecular Structure and Dynamics Volume 38, 2020 - Issue 10
Journal homepage
275
Views
14
CrossRef citations to date
0
Altmetric
Research Articles

Discrete analyses of protein dynamics

Tarun Jairaj Narwania Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; View further author information
,
Pierrick Craveura Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;d Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA; View further author information
,
Nicolas K. Shinadaa Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;e Discngine, SAS, Paris, France; View further author information
,
Aline Flochb Laboratoire D’Excellence GR-Ex, Paris, France; ;f Etablissement Français du Sang Ile de France, Créteil, France; ;g IMRB – INSERM U955 Team 2 « Transfusion et Maladies du Globule Rouge », Paris Est- Créteil Univ, Créteil, France; ;h UPEC, Université Paris Est-Créteil, Créteil, France; View further author information
,
Hubert Santuza Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; View further author information
,
Akhila Melarkode Vattekattea Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;i Faculté Des Sciences et Technologies, Saint Denis Messag, La Réunion, France; View further author information
,
Narayanaswamy Srinivasanj Molecular Biophysics Unit, IISc, Bangalore, India; View further author information
,
Joseph Rebehmeda Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;k Department of Computer Science and Mathematics, Lebanese American University, Byblos, Lebanon; View further author information
,
Jean-Christophe Gellya Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;i Faculté Des Sciences et Technologies, Saint Denis Messag, La Réunion, France; ;l IBL, Paris, FranceView further author information
,
Catherine Etchebesta Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;i Faculté Des Sciences et Technologies, Saint Denis Messag, La Réunion, France; View further author information
&
Alexandre G. de Breverna Biologie Intégrée du Globule Rouge UMR_S1134, Inserm, Univ. Paris, Univ. de la Réunion, Univ. des Antilles, Paris, France; ;b Laboratoire D’Excellence GR-Ex, Paris, France; ;c Institut National de la Transfusion Sanguine (INTS), Paris, France; ;i Faculté Des Sciences et Technologies, Saint Denis Messag, La Réunion, France; ;l IBL, Paris, FranceCorrespondence[email protected]
View further author information
 show all
Pages 2988-3002 | Received 30 May 2019, Accepted 22 Jul 2019, Published online: 12 Aug 2019

Citations (14)

Keep up to date with the latest research on this topic with citation updates for this article.

Subscribe to citation updates

Read on this site (3)

Aravindan Arun Nadaradjane, Julien Diharce, Joseph Rebehmed, Frédéric Cadet, Fabrice Gardebien, Jean-Christophe Gelly, Catherine Etchebest & Alexandre G. de Brevern. (2023) Quality assessment of VHH models. Journal of Biomolecular Structure and Dynamics 41:22, pages 13287-13301.
Read now
Akhtar Atiya, Shivani Batra, Taj Mohammad, Nasser M. Alorfi, Waleed Al Abdulmonem, Fahad A. Alhumaydhi, Ghulam Md Ashraf, Saleh S. Baeesa, Abdelbaset Mohamed Elasbali & Moyad Shahwan. (2023) Desmodin and isopongachromene as potential inhibitors of cyclin-dependent kinase 5: phytoconstituents targeting anticancer and neurological therapy. Journal of Biomolecular Structure and Dynamics 41:16, pages 8042-8052.
Read now
Neeraj K. Gaur, Biplab Ghosh, Venuka Durani Goyal, Kiran Kulkarni & Ravindra D. Makde. (2023) Evolutionary conservation of protein dynamics: insights from all-atom molecular dynamics simulations of ‘peptidase’ domain of Spt16. Journal of Biomolecular Structure and Dynamics 41:4, pages 1445-1457.
Read now

Articles from other publishers (11)

Sébastien Tourlet, Ragousandirane Radjasandirane, Julien Diharce & Alexandre G. de Brevern. (2023) AlphaFold2 Update and Perspectives. BioMedInformatics 3:2, pages 378-390.
Crossref
Alexandre G. de Brevern. (2023) An agnostic analysis of the human AlphaFold2 proteome using local protein conformations. Biochimie 207, pages 11-19.
Crossref
Ragousandirane Radjasandirane & Alexandre G. de Brevern. (2023) Structural and Dynamic Differences between Calreticulin Mutants Associated with Essential Thrombocythemia. Biomolecules 13:3, pages 509.
Crossref
Jian Yan & Zhibing Zheng. (2023) Discovery of Highly Potent CRBN Ligands and Insight into Their Binding Mode through Molecular Docking and Molecular Dynamics Simulations. ChemMedChem 18:5.
Crossref
Alexandre G. de Brevern. (2022) A Perspective on the (Rise and Fall of) Protein β-Turns. International Journal of Molecular Sciences 23:20, pages 12314.
Crossref
Poonam Vishwakarma, Akhila Melarkode Vattekatte, Nicolas Shinada, Julien Diharce, Carla Martins, Frédéric Cadet, Fabrice Gardebien, Catherine Etchebest, Aravindan Arun Nadaradjane & Alexandre G. de Brevern. (2022) VHH Structural Modelling Approaches: A Critical Review. International Journal of Molecular Sciences 23:7, pages 3721.
Crossref
Sali Anies, Vincent Jallu, Julien Diharce, Tarun J. Narwani & Alexandre G. de Brevern. (2022) Analysis of Integrin αIIb Subunit Dynamics Reveals Long-Range Effects of Missense Mutations on Calf Domains. International Journal of Molecular Sciences 23:2, pages 858.
Crossref
Pierrick Craveur, Tarun J. Narwani, Narayanaswamy Srinivasan, Jean-Christophe Gelly, Joseph Rebehmed & Alexandre G. de Brevern. (2022) Shaking the β-Bulges. IEEE/ACM Transactions on Computational Biology and Bioinformatics 19:1, pages 14-18.
Crossref
Alexandre G. de Brevern. (2020) Analysis of Protein Disorder Predictions in the Light of a Protein Structural Alphabet. Biomolecules 10:7, pages 1080.
Crossref
Amit Kumar Srivastav, Sanjeev K. Gupta & Umesh Kumar. (2020) A molecular simulation approach towards the development of universal nanocarriers by studying the pH- and electrostatic-driven changes in the dynamic structure of albumin. RSC Advances 10:23, pages 13451-13459.
Crossref
Guilhem Faure, Agnel Praveen Joseph, Pierrick Craveur, Tarun J. Narwani, Narayanaswamy Srinivasan, Jean-Christophe Gelly, Joseph Rebehmed & Alexandre G. de Brevern. (2019) iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach. Source Code for Biology and Medicine 14:1.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.