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Journal of Biomolecular Structure and Dynamics Volume 40, 2022 - Issue 1
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Research Articles

Identification of promising antiviral drug candidates against non-structural protein 15 (NSP15) from SARS-CoV-2: an in silico assisted drug-repurposing study

Rameez Jabeer Khana Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0002-0997-0535
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Rajat Kumar Jhaa Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0002-8557-4219
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Ekampreet Singha Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0002-7976-1608
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Monika Jaina Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0003-4866-3893
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Gizachew Muluneh Ameraa Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0001-5079-5639
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Rashmi Prabha Singhb Department of Biotechnology, IILM College of Engineering & Technology, Greater Noida, U.P., IndiaORCID Iconhttps://orcid.org/0000-0003-4475-3007
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Jayaraman Muthukumarana Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaCorrespondence[email protected] [email protected]
ORCID Iconhttps://orcid.org/0000-0002-0953-1196
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Amit Kumar Singha Department of Biotechnology, School of Engineering and Technology, Sharda University, Greater Noida, U.P., IndiaCorrespondence[email protected] [email protected]
ORCID Iconhttps://orcid.org/0000-0001-7130-8174
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Pages 438-448 | Received 23 Jun 2020, Accepted 20 Aug 2020, Published online: 04 Sep 2020

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Kateryna V. Miroshnychenko & Anna V. Shestopalova. (2022) Combined use of the hepatitis C drugs and amentoflavone could interfere with binding of the spike glycoprotein of SARS-CoV-2 to ACE2: the results of a molecular simulation study. Journal of Biomolecular Structure and Dynamics 40:19, pages 8672-8686.
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Wael Alturaiki, Ayman Mubarak, Abduallah Al Jurayyan & Maged Gomaa Hemida. (2021) The pivotal roles of the host immune response in the fine-tuning the infection and the development of the vaccines for SARS-CoV-2. Human Vaccines & Immunotherapeutics 17:10, pages 3297-3309.
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Bandhan Sarker, Md. Matiur Rahaman, Md. Ariful Islam, Muhammad Habibulla Alamin, Md. Maidul Husain, Farzana Ferdousi, Md. Asif Ahsan & Md. Nurul Haque Mollah. (2023) Identification of host genomic biomarkers from multiple transcriptomics datasets for diagnosis and therapies of SARS-CoV-2 infections. PLOS ONE 18:3, pages e0281981.
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Hayder M. Al-kuraishy, Ali I. Al-Gareeb, Engy Elekhnawy & Gaber El-Saber Batiha. (2022) Nitazoxanide and COVID-19: A review. Molecular Biology Reports 49:11, pages 11169-11176.
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Zheng Yao Low, Nur Zawanah Zabidi, Ashley Jia Wen Yip, Ashwini Puniyamurti, Vincent T. K. Chow & Sunil K. Lal. (2022) SARS-CoV-2 Non-Structural Proteins and Their Roles in Host Immune Evasion. Viruses 14:9, pages 1991.
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Kaifu Gao, Rui Wang, Jiahui Chen, Limei Cheng, Jaclyn Frishcosy, Yuta Huzumi, Yuchi Qiu, Tom Schluckbier, Xiaoqi Wei & Guo-Wei Wei. (2022) Methodology-Centered Review of Molecular Modeling, Simulation, and Prediction of SARS-CoV-2. Chemical Reviews 122:13, pages 11287-11368.
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Pawan K. Agrawal, Chandan Agrawal & Gerald Blunden. (2022) Artemisia Extracts and Artemisinin-Based Antimalarials for COVID-19 Management: Could These Be Effective Antivirals for COVID-19 Treatment?. Molecules 27:12, pages 3828.
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Karen A. Gammeltoft, Yuyong Zhou, Carlos R. Duarte Hernandez, Andrea Galli, Anna Offersgaard, Rui Costa, Long V. Pham, Ulrik Fahnøe, Shan Feng, Troels K. H. Scheel, Santseharay Ramirez, Jens Bukh & Judith M. Gottwein. (2021) Hepatitis C Virus Protease Inhibitors Show Differential Efficacy and Interactions with Remdesivir for Treatment of SARS-CoV-2 In Vitro . Antimicrobial Agents and Chemotherapy 65:9.
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Mengran Wang, Johanna B Withers, Piero Ricchiuto, Ivan Voitalov, Michael McAnally, Helia N Sanchez, Alif Saleh, Viatcheslav R Akmaev & Susan Dina Ghiassian. (2021) A systems-based method to repurpose marketed therapeutics for antiviral use: a SARS-CoV-2 case study. Life Science Alliance 4:5, pages e202000904.
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Tatjana Schwarz, Kirsten Heiss, Yuvaraj Mahendran, Fiordiligie Casilag, Florian Kurth, Leif E. Sander, Clemens-Martin Wendtner, Manuela A. Hoechstetter, Marcel A. Müller, Renate Sekul, Christian Drosten, Volker Stadler & Victor M. Corman. (2021) SARS-CoV-2 Proteome-Wide Analysis Revealed Significant Epitope Signatures in COVID-19 Patients. Frontiers in Immunology 12.
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Sanjay Kumar Singh, Atul Kumar Upadhyay & M. Sudhakara Reddy. (2021) Screening of potent drug inhibitors against SARS-CoV-2 RNA polymerase: an in silico approach. 3 Biotech 11:2.
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Hongxin Yu, Chunyan Li, Xing Wang, Jingyi Duan, Na Yang, Lijuan Xie, Yu Yuan, Shanze Li, Chenghao Bi, Bin Yang & Yubo Li. (2020) Techniques and Strategies for Potential Protein Target Discovery and Active Pharmaceutical Molecule Screening in a Pandemic. Journal of Proteome Research 19:11, pages 4242-4258.
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