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Research Article

Construction of a vector containing a site-specific DNA double-strand break with 3-phosphoglycolate termini and analysis of the products of end-joining in CV-1 cells '

Pages 623-636 | Published online: 03 Jul 2009

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Kamal Datta, Ronald D Neumann & Thomas A Winters. (2005) Characterization of a complex 125I-induced DNA double-strand break: Implications for repair . International Journal of Radiation Biology 81:1, pages 13-21.
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Articles from other publishers (25)

Sri Lakshmi Chalasani, Ajinkya S. Kawale, Konstantin Akopiants, Yaping Yu, Mesfin Fanta, Michael Weinfeld & Lawrence F. Povirk. (2018) Persistent 3′-phosphate termini and increased cytotoxicity of radiomimetic DNA double-strand breaks in cells lacking polynucleotide kinase/phosphatase despite presence of an alternative 3′-phosphatase. DNA Repair 68, pages 12-24.
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Susovan Mohapatra, Steven M. Yannone, Suk-Hee Lee, Robert A. Hromas, Konstantin Akopiants, Vijay Menon, Dale A. Ramsden & Lawrence F. Povirk. (2013) Trimming of damaged 3′ overhangs of DNA double-strand breaks by the Metnase and Artemis endonucleases. DNA Repair 12:6, pages 422-432.
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Monika Hlavová, Mária Čížková, Milada Vítová, Kateřina Bišová & Vilém Zachleder. (2011) DNA Damage during G2 Phase Does Not Affect Cell Cycle Progression of the Green Alga Scenedesmus quadricauda. PLoS ONE 6:5, pages e19626.
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K. Bebenek, M. Garcia-Diaz, R.-Z. Zhou, L. F. Povirk & T. A. Kunkel. (2010) Loop 1 modulates the fidelity of DNA polymerase  . Nucleic Acids Research 38:16, pages 5419-5431.
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Rui-Zhe Zhou, Konstantin Akopiants & Lawrence F. Povirk. (2010) Patching and Single-Strand Ligation in Nonhomologous DNA End Joining Despite Persistence of a Closely Opposed 3′-Phosphoglycolate-Terminated Strand Break. Radiation Research 174:3, pages 274.
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Konstantin Akopiants, Rui-Zhe Zhou, Susovan Mohapatra, Kristoffer Valerie, Susan P. Lees-Miller, Kyung-Jong Lee, David J. Chen, Patrick Revy, Jean-Pierre de Villartay & Lawrence F. Povirk. (2009) Requirement for XLF/Cernunnos in alignment-based gap filling by DNA polymerases λ and μ for nonhomologous end joining in human whole-cell extracts. Nucleic Acids Research 37:12, pages 4055-4062.
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Steven M. Yannone, Imran S. Khan, Rui-Zhe Zhou, Tong Zhou, Kristoffer Valerie & Lawrence F. Povirk. (2008) Coordinate 5′ and 3′ endonucleolytic trimming of terminally blocked blunt DNA double-strand break ends by Artemis nuclease and DNA-dependent protein kinase. Nucleic Acids Research 36:10, pages 3354-3365.
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Rui-Zhe Zhou, Luis Blanco, Miguel Garcia-Diaz, Katarzyna Bebenek, Thomas A. Kunkel & Lawrence F. Povirk. (2008) Tolerance for 8-oxoguanine but not thymine glycol in alignment-based gap filling of partially complementary double-strand break ends by DNA polymerase λ in human nuclear extracts. Nucleic Acids Research 36:9, pages 2895-2905.
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Lawrence F. Povirk, Rui-Zhe Zhou, Dale A. Ramsden, Susan P. Lees-Miller & Kristoffer Valerie. (2007) Phosphorylation in the serine/threonine 2609–2647 cluster promotes but is not essential for DNA-dependent protein kinase-mediated nonhomologous end joining in human whole-cell extracts. Nucleic Acids Research 35:12, pages 3869-3878.
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Kamal Datta, Michael Weinfeld, Ronald D. Neumann & Thomas A. Winters. (2007) Determination and Analysis of Site-Specific 125 I Decay-Induced DNA Double-Strand Break End-Group Structures . Radiation Research 167:2, pages 152-166.
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Lawrence F. Povirk, Tong Zhou, Ruizhe Zhou, Morton J. Cowan & Steven M. Yannone. (2007) Processing of 3′-Phosphoglycolate-terminated DNA Double Strand Breaks by Artemis Nuclease. Journal of Biological Chemistry 282:6, pages 3547-3558.
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G. Iliakis, H. Wang, A.R. Perrault, W. Boecker, B. Rosidi, F. Windhofer, W. Wu, J. Guan, G. Terzoudi & G. Pantelias. (2004) Mechanisms of DNA double strand break repair and chromosome aberration formation. Cytogenetic and Genome Research 104:1-4, pages 14-20.
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Jae Wan Lee, Luis Blanco, Tong Zhou, Miguel Garcia-Diaz, Katarzyna Bebenek, Thomas A. Kunkel, Zhigang Wang & Lawrence F. Povirk. (2004) Implication of DNA Polymerase λ in Alignment-based Gap Filling for Nonhomologous DNA End Joining in Human Nuclear Extracts. Journal of Biological Chemistry 279:1, pages 805-811.
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Elzbieta Pastwa, Erin M Lubner, Katherina Mezhevaya, Ronald D Neumann & Thomas A Winters. (2003) DNA uptake and repair enzyme access to transfected DNA is under reported by gene expression. Biochemical and Biophysical Research Communications 306:2, pages 421-429.
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Elzbieta Pastwa, Ronald D. Neumann, Katherina Mezhevaya & Thomas A. Winters. (2003) Repair of Radiation-Induced DNA Double-Strand Breaks is Dependent upon Radiation Quality and the Structural Complexity of Double-Strand Breaks. Radiation Research 159:2, pages 251-261.
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Garry W. Buchko & Michael Weinfeld. (2002) DNA-Targeted 2-Nitroimidazoles: Studies of the Influence of the Phenanthridine-Linked Nitroimidazoles, 2-NLP-3 and 2-NLP-4, on DNA Damage Induced by Ionizing Radiation. Radiation Research 158:3, pages 302-310.
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Kedar V. Inamdar, Jeffrey J. Pouliot, Tong Zhou, Susan P. Lees-Miller, Aghdass Rasouli-Nia & Lawrence F. Povirk. (2002) Conversion of Phosphoglycolate to Phosphate Termini on 3′ Overhangs of DNA Double Strand Breaks by the Human Tyrosyl-DNA Phosphodiesterase hTdp1. Journal of Biological Chemistry 277:30, pages 27162-27168.
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Andrea Odersky, Irina V. Panyutin, Igor G. Panyutin, Christian Schunck, Elke Feldmann, Wolfgang Goedecke, Ronald D. Neumann, Günter Obe & Petra Pfeiffer. (2002) Repair of Sequence-specific 125I-induced Double-strand Breaks by Nonhomologous DNA End Joining in Mammalian Cell-free Extracts. Journal of Biological Chemistry 277:14, pages 11756-11764.
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Kedar V. Inamdar, Yin Yu & Lawrence F. Povirk. (2002) Resistance of 3′-Phosphoglycolate DNA Ends to Digestion by Mammalian DNase III. Radiation Research 157:3, pages 306-311.
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Mark R. Kelley & Stephen H. Parsons. (2001) Redox Regulation of the DNA Repair Function of the Human AP Endonuclease Ape1/ref-1. Antioxidants & Redox Signaling 3:4, pages 671-683.
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Shuang Chen, Kedar V. Inamdar, Petra Pfeiffer, Elke Feldmann, Michele F. Hannah, Yin Yu, Jae-Wan Lee, Tong Zhou, Susan P. Lees-Miller & Lawrence F. Povirk. (2001) Accurate in Vitro End Joining of a DNA Double Strand Break with Partially Cohesive 3′-Overhangs and 3′-Phosphoglycolate Termini. Journal of Biological Chemistry 276:26, pages 24323-24330.
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Gianluca Tell, Enrico Crivellato, Alex Pines, Igor Paron, Carlo Pucillo, Giorgio Manzini, Antonella Bandiera, Mark R. Kelley, Carla Di Loreto & Giuseppe Damante. (2001) Mitochondrial localization of APE/Ref-1 in thyroid cells. Mutation Research/DNA Repair 485:2, pages 143-152.
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Shuang Chen, James C. Hannis, Jason W. Flora, David C. Muddiman, Kwabena Charles, Yin Yu & Lawrence F. Povirk. (2001) Homogeneous Preparations of 3′-Phosphoglycolate-Terminated Oligodeoxynucleotides from Bleomycin-Treated DNA as Verified by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. Analytical Biochemistry 289:2, pages 274-280.
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K. Mezhevaya, T. A. Winters & R. D. Neumann. (1999) Gene targeted DNA double-strand break induction by 125l-labeled triplex-forming oligonucleotides is highly mutagenic following repair in human cells. Nucleic Acids Research 27:21, pages 4282-4290.
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Thomas E. Wilson & Michael R. Lieber. (1999) Efficient Processing of DNA Ends during Yeast Nonhomologous End Joining. Journal of Biological Chemistry 274:33, pages 23599-23609.
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