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Computer Methods in Biomechanics and Biomedical Engineering Volume 19, 2016 - Issue 1
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Articles

Computational modeling of chemo-bio-mechanical coupling: a systems-biology approach toward wound healing

A. Buganza TepoleDepartment of Mechanical Engineering, Stanford University, Stanford, CA94305, USACorrespondence[email protected]
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E. KuhlDepartment of Mechanical Engineering, Stanford University, Stanford, CA94305, USA;Department of Bioengineering, Stanford University, Stanford, CA94305, USAView further author information
Pages 13-30 | Received 03 Jul 2014, Accepted 22 Oct 2014, Published online: 24 Nov 2014

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E. Schaller, A. Javili, I. Schmidt, A. Papastavrou & P. Steinmann. (2022) A peridynamic formulation for nonlocal bone remodelling. Computer Methods in Biomechanics and Biomedical Engineering 25:16, pages 1835-1851.
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Hironori Takeda, Yoshitaka Kameo & Taiji Adachi. (2021) Continuum modeling for neuronal lamination during cerebral morphogenesis considering cell migration and tissue growth. Computer Methods in Biomechanics and Biomedical Engineering 24:7, pages 799-805.
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P. Sáez & E. Kuhl. (2016) Computational modeling of acute myocardial infarction. Computer Methods in Biomechanics and Biomedical Engineering 19:10, pages 1107-1115.
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R. Eftimie, G. Rolin, O. E. Adebayo, S. Urcun, F. Chouly & S. P. A. Bordas. (2023) Modelling Keloids Dynamics: A Brief Review and New Mathematical Perspectives. Bulletin of Mathematical Biology 85:12.
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Zachary Harbin, David Sohutskay, Emma Vanderlaan, Muira Fontaine, Carly Mendenhall, Carla Fisher, Sherry Voytik-Harbin & Adrian Buganza Tepole. (2023) Computational mechanobiology model evaluating healing of postoperative cavities following breast-conserving surgery. Computers in Biology and Medicine 165, pages 107342.
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Aditya Konale, Zahra Ahmed, Piyush Wanchoo & Vikas Srivastava. (2023) A large deformation model for quasi-static to high strain rate response of a rate-stiffening soft polymer. International Journal of Plasticity 168, pages 103701.
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Meike Gierig, Peter Wriggers & Michele Marino. (2023) Arterial tissues and their inflammatory response to collagen damage: A continuum in silico model coupling nonlinear mechanics, molecular pathways, and cell behavior. Computers in Biology and Medicine 158, pages 106811.
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Syam Mohan, Pranay Wal, Kamla Pathak, Madhusmruti Khandai, Tapan Behl, Hassan A. Alhazmi, Gulrana Khuwaja & Asaad Khalid. (2023) Nanosilver-functionalized polysaccharides as a platform for wound dressing. Environmental Science and Pollution Research 30:19, pages 54385-54406.
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Marco Pensalfini & Adrian Buganza Tepole. (2023) Mechano-biological and bio-mechanical pathways in cutaneous wound healing. PLOS Computational Biology 19:3, pages e1010902.
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Paul P M van Zuijlen, Halil Ibrahim Korkmaz, Vivek M Sheraton, Tsjitske M Haanstra, Anouk Pijpe, Annebeth de Vries, Cornelis H van der Vlies, Eelke Bosma, Evelien de Jong, Esther Middelkoop, Fred J Vermolen & Peter M A Sloot. (2022) The Future of Burn Care From a Complexity Science Perspective. Journal of Burn Care & Research 43:6, pages 1312-1321.
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Yifan Guo, Mohammad R. K. Mofrad & Adrian Buganza Tepole. (2022) On modeling the multiscale mechanobiology of soft tissues: Challenges and progress. Biophysics Reviews 3:3.
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H Ibrahim Korkmaz, Frank B Niessen, Anouk Pijpe, Vivek M Sheraton, Fred J Vermolen, Paul AJ Krijnen, Hans WM Niessen, Peter MA Sloot, Esther Middelkoop, Susan Gibbs & Paul PM van Zuijlen. (2022) Scar formation from the perspective of complexity science: a new look at the biological system as a whole. Journal of Wound Care 31:2, pages 178-184.
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Georgiana Eftimie & Raluca Eftimie. (2022) Quantitative predictive approaches for Dupuytren disease: a brief review and future perspectives. Mathematical Biosciences and Engineering 19:3, pages 2876-2895.
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Di Zuo, Yiqian He, Stéphane Avril, Haitian Yang & Klaus Hackl. (2022) A thermodynamic framework for unified continuum models for the healing of damaged soft biological tissue. Journal of the Mechanics and Physics of Solids 158, pages 104662.
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David S. Nedrelow, Kishore V. Damodaran, Theresa A. Thurston, John P. Beyer & Victor H. Barocas. (2021) Residual stress and osmotic swelling of the periodontal ligament. Biomechanics and Modeling in Mechanobiology 20:6, pages 2047-2059.
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David O. Sohutskay, Adrian Buganza Tepole & Sherry L. Voytik-Harbin. (2021) Mechanobiological wound model for improved design and evaluation of collagen dermal replacement scaffolds. Acta Biomaterialia 135, pages 368-382.
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Manuel K. Rausch, Sapun H. Parekh, Berkin Dortdivanlioglu & Adrianne M. Rosales. (2021) Synthetic hydrogels as blood clot mimicking wound healing materials. Progress in Biomedical Engineering 3:4, pages 042006.
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Meike Gierig, Peter Wriggers & Michele Marino. (2021) Computational model of damage-induced growth in soft biological tissues considering the mechanobiology of healing. Biomechanics and Modeling in Mechanobiology 20:4, pages 1297-1315.
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David Sachs, Adam Wahlsten, Sebastian Kozerke, Gaetana Restivo & Edoardo Mazza. (2021) A biphasic multilayer computational model of human skin. Biomechanics and Modeling in Mechanobiology 20:3, pages 969-982.
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Michele Marino, Giuseppe Vairo & Peter Wriggers. (2021) Mechano-chemo-biological Computational Models for Arteries in Health, Disease and Healing: From Tissue Remodelling to Drug-eluting Devices. Current Pharmaceutical Design 27:16, pages 1904-1917.
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Emma Lejeune & Christian Linder. (2020) Interpreting stochastic agent-based models of cell death. Computer Methods in Applied Mechanics and Engineering 360, pages 112700.
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Jennifer A. Flegg, Shakti N. Menon, Helen M. Byrne & D. L. Sean McElwain. (2020) A Current Perspective on Wound Healing and Tumour-Induced Angiogenesis. Bulletin of Mathematical Biology 82:2.
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Georges Limbert. 2019. Skin Biophysics. Skin Biophysics 19 76 .
Emma Lejeune & Christian Linder. (2017) Modeling mechanical inhomogeneities in small populations of proliferating monolayers and spheroids. Biomechanics and Modeling in Mechanobiology 17:3, pages 727-743.
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E. Lejeune & C. Linder. (2018) Understanding the relationship between cell death and tissue shrinkage via a stochastic agent-based model. Journal of Biomechanics 73, pages 9-17.
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Nicole Beißner, Antonio Bolea Albero, Jendrik Füller, Thomas Kellner, Lothar Lauterboeck, Jinghu Liang, Markus Böl, Birgit Glasmacher, Christel C. Müller-Goymann & Stephan Reichl. (2018) Improved in vitro models for preclinical drug and formulation screening focusing on 2D and 3D skin and cornea constructs. European Journal of Pharmaceutics and Biopharmaceutics 126, pages 57-66.
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Georges Limbert. (2017) Mathematical and computational modelling of skin biophysics: a review. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 473:2203, pages 20170257.
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Mark S Thompson, M Nazri Bajuri, Hanifeh Khayyeri & Hanna Isaksson. (2017) Mechanobiological modelling of tendons: Review and future opportunities. Proceedings of the Institution of Mechanical Engineers, Part H: Journal of Engineering in Medicine 231:5, pages 369-377.
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Emma Lejeune & Christian Linder. (2017) Quantifying the relationship between cell division angle and morphogenesis through computational modeling. Journal of Theoretical Biology 418, pages 1-7.
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Adrián Buganza Tepole. (2017) Computational systems mechanobiology of wound healing. Computer Methods in Applied Mechanics and Engineering 314, pages 46-70.
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Marco VicecontiPeter Hunter. (2016) The Virtual Physiological Human: Ten Years After. Annual Review of Biomedical Engineering 18:1, pages 103-123.
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P. Saez. (2015) On the Theories and Numerics of Continuum Models for Adaptation Processes in Biological Tissues. Archives of Computational Methods in Engineering 23:2, pages 301-322.
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Ester Comellas, T. Christian Gasser, Facundo J. Bellomo & Sergio Oller. (2016) A homeostatic-driven turnover remodelling constitutive model for healing in soft tissues. Journal of The Royal Society Interface 13:116, pages 20151081.
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Vida Abedi, Raquel Hontecillas, Adria Carbo, Casandra Philipson, Stefan Hoops & Josep Bassaganya-Riera. 2016. Computational Immunology. Computational Immunology 145 173 .

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