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M. Randić, M. Novič, A.
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M. Randić
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M. Novič & M. Randić
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M. Randić, M. Novič, D. Vikić-Topić & D. Plavšić. (2006) Novel numerical and graphical representation of DNA sequences and proteins. SAR and QSAR in Environmental Research 17:6, pages 583-595.
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Fenglan Bai & Tianming Wang. (2006) On Graphical and Numerical Representation of Protein Sequences. Journal of Biomolecular Structure and Dynamics 23:5, pages 537-545.
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M. Randić*. (2004) 2-D Graphical representation of proteins based on virtual genetic code. SAR and QSAR in Environmental Research 15:3, pages 147-157.
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Guillermin Agüero-Chapin, Reinaldo Molina-Ruiz, Emanuel Maldonado, Gustavo de la Riva, Aminael Sánchez-Rodríguez, Vitor Vasconcelos & Agostinho Antunes. (2013) Exploring the Adenylation Domain Repertoire of Nonribosomal Peptide Synthetases Using an Ensemble of Sequence-Search Methods. PLoS ONE 8:7, pages e65926.
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Guillermin Agüero-Chapin, Gustavo A de la Riva, Reinaldo Molina-Ruiz, Aminael Sánchez-Rodríguez, Gisselle Pérez-Machado, Vítor Vasconcelos & Agostinho Antunes. (2011) Non-linear models based on simple topological indices to identify RNase III protein members. Journal of Theoretical Biology 273:1, pages 167-178.
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Guisong Chang & Tianming Wang. (2011) Phylogenetic Analysis of Protein Sequences Based on Distribution of Length About Common Substring. The Protein Journal 30:3, pages 167-172.
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Milan Randić, Jure Zupan, Alexandru T. Balaban, Dražen Vikić-Topić & Dejan Plavšić. (2010) Graphical Representation of Proteins. Chemical Reviews 111:2, pages 790-862.
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Moheb I. Abo el Maaty, Mervat M. Abo-Elkhier & Marwa A. Abd Elwahaab. (2010) Representation of protein sequences on latitude-like circles and longitude-like semi-circles. Chemical Physics Letters 493:4-6, pages 386-391.
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Yu‐Hua Yao, Qi Dai, Ling Li, Xu‐Ying Nan, Ping‐An He & Yao‐Zhou Zhang. (2009) Similarity/dissimilarity studies of protein sequences based on a new 2D graphical representation. Journal of Computational Chemistry 31:5, pages 1045-1052.
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Wei You, Shuai Gao, Haidi Deng, Shengsheng Ruan, Hongying Lu & Yancai Zhang. (2009) Similarity Analysis of DNA Sequences Using Molecular Connectivity Indices Method. Similarity Analysis of DNA Sequences Using Molecular Connectivity Indices Method.
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Yu-Hua Yao, Qi Dai, Chun Li, Ping-An He, Xu-Ying Nan & Yao-Zhou Zhang. (2008) Analysis of similarity/dissimilarity of protein sequences. Proteins: Structure, Function, and Bioinformatics 73:4, pages 864-871.
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Maykel Cruz-Monteagudo, Cristian Robert Munteanu, Fernanda Borges, M. Natália D.S. Cordeiro, Eugenio Uriarte & Humberto González-Díaz. (2008) Quantitative Proteome–Property Relationships (QPPRs). Part 1: Finding biomarkers of organic drugs with mean Markov connectivity indices of spiral networks of blood mass spectra. Bioorganic & Medicinal Chemistry 16:22, pages 9684-9693.
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Milan Randić. (2008) Another look at the chaos-game representation of DNA. Chemical Physics Letters 456:1-3, pages 84-88.
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Chun Li, Lili Xing & Xin Wang. (2008) 2-D graphical representation of protein sequences and its application to coronavirus phylogeny. BMB Reports 41:3, pages 217-222.
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Maykel Cruz-MonteagudoHumberto González-DíazFernanda BorgesElena Rosa DominguezM. Natália D.S. Cordeiro. (2008) 3D-MEDNEs: An Alternative “in Silico” Technique for Chemical Research in Toxicology. 2. Quantitative Proteome−Toxicity Relationships (QPTR) based on Mass Spectrum Spiral Entropy. Chemical Research in Toxicology 21:3, pages 619-632.
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Fenglan Bai, Dachao Li & Tianming Wang. (2007) A new mapping rule for RNA secondary structures with its applications. Journal of Mathematical Chemistry 43:3, pages 932-943.
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Guillermín Agüero-ChapínHumberto González-DíazGustavo de la RivaEdrey RodríguezAminael Sánchez-RodríguezGianni PoddaRoberto I. Vazquez-Padrón. (2008)
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Yi Zhang & Jun Wang. (2007) Volatilities of codons and its application in similarity analysis of biological sequences. Journal of Mathematical Chemistry 43:2, pages 864-873.
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Milan Randić. (2007) On a geometry-based approach to protein sequence alignment. Journal of Mathematical Chemistry 43:2, pages 756-772.
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Humberto González-Díaz, Yenny González-Díaz, Lourdes Santana, Florencio M. Ubeira & Eugenio Uriarte. (2008) Proteomics, networks and connectivity indices. PROTEOMICS 8:4, pages 750-778.
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Milan Randić, Jure Zupan & Dražen Vikić-Topić. (2007) On representation of proteins by star-like graphs. Journal of Molecular Graphics and Modelling 26:1, pages 290-305.
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Milan Randić. (2007) 2-D Graphical representation of proteins based on physico-chemical properties of amino acids. Chemical Physics Letters 440:4-6, pages 291-295.
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Bao-Hua Zhang, Hai-Shui Wang & Lu Xu. (2007) A novel invariant and sequence comparison for DNA. Chemometrics and Intelligent Laboratory Systems 87:2, pages 194-199.
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Qi Dai, Xiao-qing Liu & Tian-ming Wang. (2007) Analysis of protein sequences and their secondary structures based on transition matrices. Journal of Molecular Structure: THEOCHEM 803:1-3, pages 115-122.
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Gašper JakličTomaž PisanskiMilan Randić. (2006) Characterization of Complex Biological Systems by Matrix Invariants. Journal of Computational Biology 13:9, pages 1558-1564.
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Guillermín Agüero-Chapin, Humberto González-Díaz, Reinaldo Molina, Javier Varona-Santos, Eugenio Uriarte & Yenny González-Díaz. (2006)
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Milan Randić, Darko Butina & Jure Zupan. (2006) Novel 2-D graphical representation of proteins. Chemical Physics Letters 419:4-6, pages 528-532.
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Milan Randić, Frank A. Witzmann, Varshna Kodali & Subhash C. Basak. (2005) On the Dependence of a Characterization of Proteomics Maps on the Number of Protein Spots Considered. Journal of Chemical Information and Modeling 46:1, pages 116-122.
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Fenglan Bai & Tianming Wang. (2005) A 2-D graphical representation of protein sequences based on nucleotide triplet codons. Chemical Physics Letters 413:4-6, pages 458-462.
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Jure Zupan & Milan Randić. (2005) Algorithm for Coding DNA Sequences into “Spectrum-like” and “Zigzag” Representations. Journal of Chemical Information and Modeling 45:2, pages 309-313.
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Milan Randić, Jure Zupan & Alexandru T. Balaban. (2004) Unique graphical representation of protein sequences based on nucleotide triplet codons. Chemical Physics Letters 397:1-3, pages 247-252.
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