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Biotechnology & Biotechnological Equipment Volume 32, 2018 - Issue 3

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Article; Bioinformatics

DeepFinder: An integration of feature-based and deep learning approach for DNA motif discovery

Nung Kion LeeDepartment of Cognitive Sciences, Faculty of Cognitive Sciences and Human Development, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, MalaysiaCorrespondence[email protected]
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Farah Liyana AzizanCentre For Pre-University Studies, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, MalaysiaView further author information

Yu Shiong WongDepartment of Cognitive Sciences, Faculty of Cognitive Sciences and Human Development, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, MalaysiaView further author information

Norshafarina OmarDepartment of Cognitive Sciences, Faculty of Cognitive Sciences and Human Development, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, MalaysiaView further author information

Pages 759-768 | Received 17 Feb 2017, Accepted 03 Feb 2018, Published online: 10 Feb 2018

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https://doi.org/10.1080/13102818.2018.1438209
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Citations (7)

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Articles from other publishers (7)

Rajashree Chaurasia & Udayan Ghose. (2023) Human DNA/RNA motif mining using deep-learning methods: a scoping review. Network Modeling Analysis in Health Informatics and Bioinformatics 12:1.
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Patrick Schäfer & Ulf Leser. (2023) Motiflets. Proceedings of the VLDB Endowment 16:4, pages 725-737.
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Kanu Geete & Manish Pandey. (2021) Robust Transcription Factor Binding Site Prediction Using Deep Neural Networks. Current Bioinformatics 15:10, pages 1137-1152.
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Alexandra Grote, Yichao Li, Canhui Liu, Denis Voronin, Adam Geber, Sara Lustigman, Thomas R. Unnasch, Lonnie Welch & Elodie Ghedin. (2020) Prediction pipeline for discovery of regulatory motifs associated with Brugia malayi molting. PLOS Neglected Tropical Diseases 14:6, pages e0008275.
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Jayeon Lim, SoYoun Bang, Jiyeon Kim, Cheolyong Park, JunSang Cho & SungHwan Kim. (2019) Integrative Deep Learning for Identifying Differentially Expressed (DE) Biomarkers. Computational and Mathematical Methods in Medicine 2019, pages 1-10.
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Hongwei Ge, Jinghong Yu, Liang Sun, Zhen Wang & Yao Yao. (2019) Discovery of DNA Motif Utilising an Integrated Strategy Based on Random Projection and Particle Swarm Optimization. Mathematical Problems in Engineering 2019, pages 1-12.
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Hasnaa Al-Shaikhli & Elise de Doncker. (2019) qSMF: an Approximate Algorithm for Quotum Planted Motif Search on ChIP-Seq Data. qSMF: an Approximate Algorithm for Quotum Planted Motif Search on ChIP-Seq Data.

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