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Research Article

A kinetic, modeling and mechanistic re-analysis of thymidine phosphorylase and some related enzymes

REVIEW ARTICLE

Pages 483-518 | Received 08 Aug 2005, Accepted 24 Feb 2006, Published online: 20 Oct 2008

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NatalyaG. Panova, CyrilS. Alexeev, KonstantinM. Polyakov, SergeiA. Gavryushov, AnatoliyM. Kritzyn & SergeyN. Mikhailov. (2008) Substrate Specificity of Thymidine Phosphorylase of E. Coli: Role of Hydroxyl Groups. Nucleosides, Nucleotides & Nucleic Acids 27:12, pages 1211-1214.
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Felix Kaspar, Margarita Seeger, Sarah Westarp, Christoph Köllmann, Anna P. Lehmann, Patrick Pausch, Sebastian Kemper, Peter Neubauer, Gert Bange, Anett Schallmey, Daniel B. Werz & Anke Kurreck. (2021) Diversification of 4′-Methylated Nucleosides by Nucleoside Phosphorylases. ACS Catalysis 11:17, pages 10830-10835.
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Felix Kaspar, Darian S. Wolff, Peter Neubauer, Anke Kurreck & Vickery L. Arcus. (2021) pH-Independent Heat Capacity Changes during Phosphorolysis Catalyzed by the Pyrimidine Nucleoside Phosphorylase from Geobacillus thermoglucosidasius . Biochemistry 60:20, pages 1573-1577.
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Vladimir A Stepchenko, Anatoly I Miroshnikov, Frank Seela & Igor A Mikhailopulo. (2016) Enzymatic synthesis and phosphorolysis of 4(2)-thioxo- and 6(5)-azapyrimidine nucleosides by E. coli nucleoside phosphorylases . Beilstein Journal of Organic Chemistry 12, pages 2588-2601.
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Alicja Stachelska-Wierzchowska, Jacek Wierzchowski, Agnieszka Bzowska & Beata Wielgus-Kutrowska. (2015) Site-Selective Ribosylation of Fluorescent Nucleobase Analogs Using Purine-Nucleoside Phosphorylase as a Catalyst: Effects of Point Mutations. Molecules 21:1, pages 44.
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Jacek Wierzchowski, Jan M. Antosiewicz & David Shugar. (2014) 8-Azapurines as isosteric purine fluorescent probes for nucleic acid and enzymatic research. Mol. BioSyst. 10:11, pages 2756-2774.
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Yanhui Yang, Yu Chen, Herve Aloysius, Daigo Inoyama & Longqin Hu. 2013. Enzyme Technologies. Enzyme Technologies 163 235 .
Rafael G. Silva, Jennifer S. Hirschi, Mahmoud Ghanem, Andrew S. Murkin & Vern L. Schramm. (2011) Arsenate and Phosphate as Nucleophiles at the Transition States of Human Purine Nucleoside Phosphorylase. Biochemistry 50:13, pages 2701-2709.
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Igor A. Mikhailopulo & Anatoly I. Miroshnikov. (2011) Biologically important nucleosides: modern trends in biotechnology and application. Mendeleev Communications 21:2, pages 57-68.
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Michael C. FlickingerJose‐Vicente Sinisterra, Andrés‐Rafael Alcántara, Marcos Almendros, María J. Hernáiz, José‐María Sánchez‐Montero & Jorge Trelles. 2009. Encyclopedia of Industrial Biotechnology. Encyclopedia of Industrial Biotechnology 1 32 .
Harsh V. Jain, Roshni Rasheed & Thomas I. Kalman. (2010) The role of phosphate in the action of thymidine phosphorylase inhibitors: Implications for the catalytic mechanism. Bioorganic & Medicinal Chemistry Letters 20:5, pages 1648-1651.
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Takahiro Mukai, Masato Taketomi, Masaaki Tashiro, Fumihiko Yamamoto & Minoru Maeda. (2009) 6‐[(2‐Iminopyrrolidinyl)methyl]‐5‐[ 125 I]iodouracil as a potential thymidine phosphorylase‐targeted radiopharmaceutical: synthesis and preliminary biological evaluation . Journal of Labelled Compounds and Radiopharmaceuticals 52:5, pages 146-150.
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Vern L Schramm. (2007) Binding isotope effects: boon and bane. Current Opinion in Chemical Biology 11:5, pages 529-536.
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