386
Views
36
CrossRef citations to date
0
Altmetric
Original Articles

Thermodynamic Properties of the Specific Binding Between Ag+ Ions and C:C Mismatched Base Pairs in Duplex DNA

, , &
Pages 149-167 | Received 14 Oct 2010, Accepted 06 Jan 2011, Published online: 24 Feb 2011

Keep up to date with the latest research on this topic with citation updates for this article.

Read on this site (2)

Li-Qun Gu, Kent S. Gates, Michael X. Wang & Guangfu Li. (2018) What is the potential of nanolock– and nanocross–nanopore technology in cancer diagnosis?. Expert Review of Molecular Diagnostics 18:2, pages 113-117.
Read now
Takenori Dairaku, Kyoko Furuita, Hajime Sato, Yoshinori Kondo, Chojiro Kojima, Akira Ono & Yoshiyuki Tanaka. (2015) Exploring a DNA Sequence for the Three-Dimensional Structure Determination of a Silver(I)-Mediated C-C Base Pair in a DNA Duplex By 1H NMR Spectroscopy. Nucleosides, Nucleotides & Nucleic Acids 34:12, pages 877-900.
Read now

Articles from other publishers (34)

Hidetaka Torigoe, Jiro Kondo & Fumihiro Arakawa. (2023) Specific binding of Hg2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA. Journal of Inorganic Biochemistry 241, pages 112125.
Crossref
Zhen Dong, Chengxia Xie, Xianming Li & Peng Wu. (2023) Probing the Tl+-induced structural transformation of G-rich DNA to G-quadruplex with a label‐free thioflavin T-based biosensor. Sensors and Actuators B: Chemical 378, pages 133210.
Crossref
Hidetaka Torigoe & Fumihiro Arakawa. (2023) Importance of isothermal titration calorimetry for the detection of the direct binding of metal ions to mismatched base pairs in duplex DNA. Dalton Transactions.
Crossref
Fred David, Caleb Setzler, Alexandra Sorescu, Raquel L. Lieberman, Flora Meilleur & Jeffrey T. Petty. (2022) Mapping H + in the Nanoscale (A 2 C 4 ) 2 -Ag 8 Fluorophore . The Journal of Physical Chemistry Letters 13:48, pages 11317-11322.
Crossref
Luyu Wei, Zhilong Wang, Jia Wang, Xiaohong Wang & Yiping Chen. (2022) Aptamer-based colorimetric detection of methicillin-resistant Staphylococcus aureus by using a CRISPR/Cas12a system and recombinase polymerase amplification. Analytica Chimica Acta 1230, pages 340357.
Crossref
Luciano Gabriel Silva & Gerald Weber. (2022) Mesoscopic model confirms strong base pair metal mediated bonding for T–Hg2+–T and weaker for C–Ag+–C. Chemical Physics Letters 803, pages 139847.
Crossref
Surjit Bhai & Bishwajit Ganguly. (2021) Role of pH in the stability of cytosine-cytosine mismatch and canonical AT and GC base pairs mediated with silver ion: a DFT study. Structural Chemistry 33:1, pages 35-47.
Crossref
Asmo Aro-Heinilä, Assi Lepistö, Antti Äärelä, Tuomas Antti Lönnberg & Pasi Virta. (2021) 2-Trifluoromethyl-6-mercurianiline Nucleotide, a Sensitive 19 F NMR Probe for Hg(II)-mediated Base Pairing . The Journal of Organic Chemistry 87:1, pages 137-146.
Crossref
Celin Acharya, Devanshi Khare, Divya TV, Pallavi Chandwadkar & Nilesh Kolhe. 2021. Microbial and Natural Macromolecules. Microbial and Natural Macromolecules 497 529 .
Yi Fen Xie, Meng Li Liu, Wen Yi Lv, Xue Li, Peng Fei Gao, Yuan Fang Li & Cheng Zhi Huang. (2019) Metal-Mediated Gold Nanospheres Assembled for Dark-Field Microscopy Imaging Scatterometry. Talanta 201, pages 280-285.
Crossref
Simon Vecchioni, Mark C. Capece, Emily Toomey, Le Nguyen, Austin Ray, Alissa Greenberg, Kosuke Fujishima, Jesica Urbina, Ivan G. Paulino-Lima, Vitor Pinheiro, Joseph Shih, Gary Wessel, Shalom J. Wind & Lynn Rothschild. (2019) Construction and characterization of metal ion-containing DNA nanowires for synthetic biology and nanotechnology. Scientific Reports 9:1.
Crossref
Sebastian Lars Müller, Xinglong Zhou, Peter Leonard, Oxana Korzhenko, Constantin Daniliuc & Frank Seela. (2019) Functionalized Silver‐Ion‐Mediated α‐dC/β‐dC Hybrid Base Pairs with Exceptional Stability: α‐ d ‐5‐Iodo‐2′‐Deoxycytidine and Its Octadiynyl Derivative in Metal DNA . Chemistry – A European Journal 25:12, pages 3077-3090.
Crossref
Xiwen Xing, Yihong Feng, Zutao Yu, Kumi Hidaka, Fenyong Liu, Akira Ono, Hiroshi Sugiyama & Masayuki Endo. (2018) Direct Observation of the Double‐Stranded DNA Formation through Metal Ion‐Mediated Base Pairing in the Nanoscale Structure. Chemistry – A European Journal 25:6, pages 1446-1450.
Crossref
Olivia P Schmidt, Andrea S Benz, Guillaume Mata & Nathan W Luedtke. (2018) HgII binds to C–T mismatches with high affinity. Nucleic Acids Research 46:13, pages 6470-6479.
Crossref
Zai-Hui DU, Xiang-Yang LI, Jing-Jing TIAN, Yang-Zi Zhang, Hong-Tao TIAN & Wen-Tao XU. (2018) Progress on Detection of Metals Ions by Functional Nucleic Acids Biosensor. Chinese Journal of Analytical Chemistry 46:7, pages 995-1004.
Crossref
Xiurong Guo, Peter Leonard, Sachin A. Ingale, Jiang Liu, Hui Mei, Martha Sieg & Frank Seela. (2018) 5-Aza-7-deaza-2′-deoxyguanosine and 2′-Deoxycytidine Form Programmable Silver-Mediated Base Pairs with Metal Ions in the Core of the DNA Double Helix. Chemistry - A European Journal 24:35, pages 8883-8892.
Crossref
Xiurong Guo, Peter Leonard, Sachin A. Ingale & Frank Seela. (2017) Gemcitabine, Pyrrologemcitabine, and 2′‐Fluoro‐2′‐Deoxycytidines: Synthesis, Physical Properties, and Impact of Sugar Fluorination on Silver Ion Mediated Base Pairing. Chemistry – A European Journal 23:70, pages 17740-17754.
Crossref
Yong Wang, Kai Tian, Ruicheng Shi, Amy Gu, Michael Pennella, Lindsey Alberts, Kent S. Gates, Guangfu Li, Hongxin Fan, Michael X. Wang & Li-Qun Gu. (2017) Nanolock–Nanopore Facilitated Digital Diagnostics of Cancer Driver Mutation in Tumor Tissue. ACS Sensors 2:7, pages 975-981.
Crossref
Shenshan Zhan, Yuangen Wu, Lumei Wang, Xuejia Zhan & Pei Zhou. (2016) A mini-review on functional nucleic acids-based heavy metal ion detection. Biosensors and Bioelectronics 86, pages 353-368.
Crossref
Seungyeop Choi, Gyudo Lee, In Soo Park, Myeonggu Son, Woong Kim, Hyungbeen Lee, Sei-Young Lee, Sungsoo Na, Dae Sung Yoon, Rashid Bashir, Jinsung Park & Sang Woo Lee. (2016) Detection of Silver Ions Using Dielectrophoretic Tweezers-Based Force Spectroscopy. Analytical Chemistry 88:22, pages 10867-10875.
Crossref
Yunhua Shi, Hongxia Sun, Junfeng Xiang, Hongbo Chen, Suge Zhang, Aijiao Guan, Qian Li, Shujuan Xu & Yalin Tang. (2016) Reversible regulation of the supramolecular chirality of a cyanine dye by using the G-quadruplex structure as a template. Chemical Communications 52:45, pages 7302-7305.
Crossref
Xinying Hong, Hongduan Huang, Mingxing Chen, Feng Liu & Na Li. (2016) A fluorescence anisotropy study of the DNA hybridization reaction mediated by formation of the C–Ag + –C structure . Analytical Methods 8:15, pages 3156-3162.
Crossref
Jiro KondoYoshinari TadaTakenori DairakuHisao SaneyoshiItaru OkamotoYoshiyuki TanakaAkira Ono. (2015) High‐Resolution Crystal Structure of a Silver(I)–RNA Hybrid Duplex Containing Watson–Crick‐like CSilver(I)C Metallo‐Base Pairs. Angewandte Chemie International Edition 54:45, pages 13323-13326.
Crossref
Jiro Kondo, Yoshinari Tada, Takenori Dairaku, Hisao Saneyoshi, Itaru Okamoto, Yoshiyuki Tanaka & Akira Ono. (2015) High‐Resolution Crystal Structure of a Silver(I)–RNA Hybrid Duplex Containing Watson–Crick‐like CSilver(I)C Metallo‐Base Pairs. Angewandte Chemie 127:45, pages 13521-13524.
Crossref
Wei Deng, Bin Zheng, Wei Ding, Hong Zhu & Hao-jun Liang. (2015) Metal-Triggered DNA Folding by Different Mechanisms. Chinese Journal of Chemical Physics 28:5, pages 630-638.
Crossref
Yoshiyuki Tanaka, Jiro Kondo, Vladimír Sychrovský, Jakub Šebera, Takenori Dairaku, Hisao Saneyoshi, Hidehito Urata, Hidetaka Torigoe & Akira Ono. (2015) Structures, physicochemical properties, and applications of T–Hg II –T, C–Ag I –C, and other metallo-base-pairs . Chemical Communications 51:98, pages 17343-17360.
Crossref
Yong Wang, Brandon Ritzo & Li-Qun Gu. (2015) Silver( i ) ions modulate the stability of DNA duplexes containing cytosine, methylcytosine and hydroxymethylcytosine at different salt concentrations . RSC Advances 5:4, pages 2655-2658.
Crossref
Yong Wang, Bin-Quan Luan, Zhiyu Yang, Xinyue Zhang, Brandon Ritzo, Kent Gates & Li-Qun Gu. (2014) Single Molecule Investigation of Ag+ Interactions with Single Cytosine-, Methylcytosine- and Hydroxymethylcytosine-Cytosine Mismatches in a Nanopore. Scientific Reports 4:1.
Crossref
Jian Peng, Yong Shao, Lingling Liu, Lihua Zhang, Wensheng Fu & Hua Liu. (2014) Role of anion polarizability in fluorescence sensitization of DNA-templated silver nanoclusters. Nanotechnology 25:23, pages 235501.
Crossref
Iryna Goncharova. (2014) Ag(I)-mediated homo and hetero pairs of guanosine and cytidine: Monitoring by circular dichroism spectroscopy. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 118, pages 221-227.
Crossref
Wei Ding, Mengze Xu, Hong Zhu & Haojun Liang. (2013) Mechanism of the hairpin folding transformation of thymine-cytosine-rich oligonucleotides induced by Hg(II) and Ag(I) ions. The European Physical Journal E 36:9.
Crossref
David Loakes. 2013. Organophosphorus Chemistry. Organophosphorus Chemistry 285 353 .
Dominik A. Megger, Nicole Megger & Jens Müller. 2012. Interplay between Metal Ions and Nucleic Acids. Interplay between Metal Ions and Nucleic Acids 295 317 .
Akira Ono, Hidetaka Torigoe, Yoshiyuki Tanaka & Itaru Okamoto. (2011) Binding of metal ions by pyrimidine base pairs in DNA duplexes. Chemical Society Reviews 40:12, pages 5855.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.