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Gut Microbes Volume 15, 2023 - Issue 1
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Research Paper

Longitudinal flux balance analyses of a patient with episodic colonic inflammation reveals microbiome metabolic dynamics

Arianna Basilea Department of Biology, University of Padova, Padua, Italy;b School of Medicine, University of Galway, Galway, IrelandView further author information
,
Almut Heinkenb School of Medicine, University of Galway, Galway, Ireland;c Ryan Institute, University of Galway, Galway, IrelandView further author information
,
Johannes Herteld Department of Psychiatry and Psychotherapy, University Medicine Greifswald, Greifswald, GermanyView further author information
,
Larry Smarre Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USAView further author information
,
Weizhong Lif J. Craig Venter Institute, San Diego, La Jolla, CA, USAView further author information
,
Laura Treua Department of Biology, University of Padova, Padua, ItalyCorrespondence[email protected]
View further author information
,
Giorgio Vallea Department of Biology, University of Padova, Padua, ItalyView further author information
,
Stefano Campanaroa Department of Biology, University of Padova, Padua, ItalyView further author information
&
Ines Thieleb School of Medicine, University of Galway, Galway, Ireland;c Ryan Institute, University of Galway, Galway, Ireland;g Discipline of Microbiology, University of Galway, Galway, Ireland;h APC Microbiome Ireland, University College Cork, Cork, IrelandCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0002-8071-7110View further author information
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Article: 2226921 | Received 16 Dec 2022, Accepted 14 Jun 2023, Published online: 12 Jul 2023

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A. Krawczyk, T. Gosiewski, B. Zapała, K. Kowalska-Duplaga & D. Salamon. (2023) Alterations in intestinal Archaea composition in pediatric patients with Crohn’s disease based on next-generation sequencing – a pilot study. Gut Microbes 15:2.
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Articles from other publishers (3)

Yanqi Peng, Yingshuo Li, Yuzhen Pi & Xiqing Yue. (2024) Effects of almond (Armeniaca Sibirica L. Lam) polysaccharides on gut microbiota and anti-inflammatory effects on LPS-induced RAW264.7 cells. International Journal of Biological Macromolecules 263, pages 130098.
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Filippo Martinelli, Almut Heinken, Ann-Kristin Henning, Maria A. Ulmer, Tim Hensen, Antonio González, Matthias Arnold, Sanjay Asthana, Kathrin Budde, Corinne D. Engelman, Mehrbod Estaki, Hans-Jörgen Grabe, Margo B. Heston, Sterling Johnson, Gabi Kastenmüller, Cameron Martino, Daniel McDonald, Federico E. Rey, Ingo Kilimann, Olive Peters, Xiao Wang, Eike Jakob Spruth, Anja Schneider, Klaus Fliessbach, Jens Wiltfang, Niels Hansen, Wenzel Glanz, Katharina Buerger, Daniel Janowitz, Christoph Laske, Matthias H. Munk, Annika Spottke, Nina Roy, Matthias Nauck, Stefan Teipel, Rob Knight, Rima F. Kaddurah-Daouk, Barbara B. Bendlin, Johannes Hertel & Ines Thiele. (2024) Whole-body metabolic modelling reveals microbiome and genomic interactions on reduced urine formate levels in Alzheimer’s disease. Scientific Reports 14:1.
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Klara Cerk, Pablo Ugalde‐Salas, Chabname Ghassemi Nedjad, Maxime Lecomte, Coralie Muller, David J. Sherman, Falk Hildebrand, Simon Labarthe & Clémence Frioux. (2024) Community‐scale models of microbiomes: Articulating metabolic modelling and metagenome sequencing. Microbial Biotechnology 17:1.
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