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Journal of Extracellular Vesicles Volume 8, 2019 - Issue 1

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Research Article

Determination of variability due to biological and technical variation in urinary extracellular vesicles as a crucial step in biomarker discovery studies

Eline OeyenHealth Department, Flemish Institute for Technological Research (VITO), Mol, Belgium;Centre for Proteomics (CFP), University of Antwerp, Antwerp, Belgium

https://orcid.org/0000-0003-3227-7250 View further author information

Hanny WillemsHealth Department, Flemish Institute for Technological Research (VITO), Mol, Belgium;Centre for Proteomics (CFP), University of Antwerp, Antwerp, BelgiumView further author information

Ruben ’T KindtResearch Institute for Chromatography, Kortrijk, BelgiumView further author information

Koen SandraResearch Institute for Chromatography, Kortrijk, BelgiumView further author information

Kurt BoonenHealth Department, Flemish Institute for Technological Research (VITO), Mol, Belgium;Centre for Proteomics (CFP), University of Antwerp, Antwerp, Belgium

https://orcid.org/0000-0002-6252-7065 View further author information

Lucien HoekxUrology Department, Antwerp University Hospital (UZA), Edegem, BelgiumView further author information

Stefan De WachterUrology Department, Antwerp University Hospital (UZA), Edegem, Belgium

https://orcid.org/0000-0002-6183-9251 View further author information

Filip AmeyeUrology Department, AZ Maria Middelares Ghent, Ghent, BelgiumView further author information

Inge MertensHealth Department, Flemish Institute for Technological Research (VITO), Mol, Belgium;Centre for Proteomics (CFP), University of Antwerp, Antwerp, BelgiumCorrespondence[email protected]

https://orcid.org/0000-0002-4888-3485 View further author information

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Article: 1676035 | Received 25 Jan 2019, Accepted 17 Sep 2019, Published online: 13 Oct 2019

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https://doi.org/10.1080/20013078.2019.1676035
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Cristina Grange, Alessia Dalmasso, Judiel John Cortez, Beatrice Spokeviciute & Benedetta Bussolati. (2023) Exploring the role of urinary extracellular vesicles in kidney physiology, aging, and disease progression. American Journal of Physiology-Cell Physiology 325:6, pages C1439-C1450.
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Manisha Dass, Mohinder Kaur, Simran Aittan, Pratibha Sharma, Sachin Punia, Rajagopalan Muthumohan, Divya Anthwal, Rakesh K. Gupta, Gargi Mahajan, Pooja Kumari, Neera Sharma, Rajesh S. Taneja, Lokesh K. Sharma, Ritu Shree, Jaya S. Tyagi, Vivek Lal & Sagarika Haldar. (2023) MPT51 and MPT64-based antigen detection assay for the diagnosis of extrapulmonary tuberculosis from urine samples. Diagnostic Microbiology and Infectious Disease 107:1, pages 115973.
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Stephanie Jordaens, Eline Oeyen, Hanny Willems, Filip Ameye, Stefan De Wachter, Patrick Pauwels & Inge Mertens. (2023) Protein Biomarker Discovery Studies on Urinary sEV Fractions Separated with UF-SEC for the First Diagnosis and Detection of Recurrence in Bladder Cancer Patients. Biomolecules 13:6, pages 932.
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Siddharth S. Sahu, Moein T. Gevari, Ábel Nagy, Maxime Gestin, Petra Hååg, Rolf Lewensohn, Kristina Viktorsson, Amelie E. Karlström & Apurba Dev. (2023) Multi-marker profiling of extracellular vesicles using streaming current and sequential electrostatic labeling. Biosensors and Bioelectronics 227, pages 115142.
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Soraya Williams, Aveen R Jalal, Mark P Lewis & Owen G Davies. (2023) A survey to evaluate parameters governing the selection and application of extracellular vesicle isolation methods. Journal of Tissue Engineering 14, pages 204173142311551.
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Leyla A. Erozenci, Irene V. Bijnsdorp, Sander R. Piersma & Connie R. Jimenez. 2023. Mass Spectrometry-Based Proteomics. Mass Spectrometry-Based Proteomics 235 251 .

Manisha Dass, Simran Aittan, Rajagopalan Muthumohan, Divya Anthwal, Rakesh Kumar Gupta, Gargi Mahajan, Pooja Kumari, Neera Sharma, Rajesh S. Taneja, Lokesh Kumar Sharma, Ritu Shree, Vivek Lal, Jaya Sivaswami Tyagi & Sagarika Haldar. (2022) Utility of cell-free transrenal DNA for the diagnosis of Tuberculous Meningitis: A proof-of-concept study. Tuberculosis 135, pages 102213.
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Vanessa L. Correll, Joseph J. Otto, Cristina M. Risi, Brian P. Main, Paul C. Boutros, Thomas Kislinger, Vitold E. Galkin, Julius O. Nyalwidhe, O. John Semmes & Lifang Yang. (2022) Optimization of small extracellular vesicle isolation from expressed prostatic secretions in urine for in‐depth proteomic analysis. Journal of Extracellular Vesicles 11:2.
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Tine Tesovnik, Barbara Jenko Bizjan, Robert Šket, Maruša Debeljak, Tadej Battelino & Jernej Kovač. (2021) Technological Approaches in the Analysis of Extracellular Vesicle Nucleotide Sequences. Frontiers in Bioengineering and Biotechnology 9.
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Leyla A. Erozenci, Sander R. Piersma, Thang V. Pham, Irene V. Bijnsdorp & Connie R. Jimenez. (2021) Longitudinal stability of urinary extracellular vesicle protein patterns within and between individuals. Scientific Reports 11:1.
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Marvin Droste, Tobias Tertel, Stefanie Jeruschke, Robin Dittrich, Evangelia Kontopoulou, Bernd Walkenfort, Verena Börger, Peter F. Hoyer, Anja K. Büscher, Basant K. Thakur & Bernd Giebel. (2021) Single Extracellular Vesicle Analysis Performed by Imaging Flow Cytometry and Nanoparticle Tracking Analysis Evaluate the Accuracy of Urinary Extracellular Vesicle Preparation Techniques Differently. International Journal of Molecular Sciences 22:22, pages 12436.
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Karina Barreiro, Om Prakash Dwivedi, Sami Valkonen, Per‐Henrik Groop, Tiinamaija Tuomi, Harry Holthofer, Antti Rannikko, Marjo Yliperttula, Pia Siljander, Saara Laitinen, Elina Serkkola, Taija af Hällström, Carol Forsblom, Leif Groop & Maija Puhka. (2021) Urinary extracellular vesicles: Assessment of pre‐analytical variables and development of a quality control with focus on transcriptomic biomarker research. Journal of Extracellular Vesicles 10:12.
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Uta Erdbrügger, Charles J. Blijdorp, Irene V. Bijnsdorp, Francesc E. Borràs, Dylan Burger, Benedetta Bussolati, James Brian Byrd, Aled Clayton, James W. Dear, Juan M. Falcón‐Pérez, Cristina Grange, Andrew F. Hill, Harry Holthöfer, Ewout J. Hoorn, Guido Jenster, Connie R. Jimenez, Kerstin Junker, John Klein, Mark A. Knepper, Erik H. Koritzinsky, James M. Luther, Metka Lenassi, Janne Leivo, Inge Mertens, Luca Musante, Eline Oeyen, Maija Puhka, Martin E. van Royen, Catherine Sánchez, Carolina Soekmadji, Visith Thongboonkerd, Volkert van Steijn, Gerald Verhaegh, Jason P. Webber, Kenneth Witwer, Peter S.T. Yuen, Lei Zheng, Alicia Llorente & Elena S. Martens‐Uzunova. (2021) Urinary extracellular vesicles: A position paper by the Urine Task Force of the International Society for Extracellular Vesicles. Journal of Extracellular Vesicles 10:7.
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Ruijuan Chen, Yuanjing Yi, Wenbiao Xiao, Bowen Zhong, Yi Shu, Le Zhang & Yi Zeng. (2021) Label-Free Liquid Chromatography–Mass Spectrometry Proteomic Analysis of Urinary Identification in Diabetic Vascular Dementia in a Han Chinese Population. Frontiers in Aging Neuroscience 13.
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Karina Barreiro, Tobias B. Huber & Harry Holthofer. 2021. Translational Urinomics. Translational Urinomics 29 40 .

Haiyang Zhang, Yuanyuan Deng, Xinyi Liu, Jie Sun, Leyao Ma, Yajie Ding, Zhen Zhan, Hao Zhang, Yuchen Yang, Yanhong Gu, Anton B. Iliuk, Chenxi Yang & W. Andy Tao. (2020) Glass Fiber-Supported Hybrid Monolithic Spin Tip for Enrichment of Phosphopeptides from Urinary Extracellular Vesicles. Analytical Chemistry 92:21, pages 14790-14797.
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Marco Ponzetti & Nadia Rucci. (2020) Switching Homes: How Cancer Moves to Bone. International Journal of Molecular Sciences 21:11, pages 4124.
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Manuel Castanheira de Oliveira, Hugo R. Caires, Maria J. Oliveira, Avelino Fraga, M. Helena Vasconcelos & Ricardo Ribeiro. (2020) Urinary Biomarkers in Bladder Cancer: Where Do We Stand and Potential Role of Extracellular Vesicles. Cancers 12:6, pages 1400.
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Qiang Tan, Shuang Shi, Jingjie Liang, Xiaowei Zhang, Dingren Cao & Zhengguang Wang. (2020) MicroRNAs in Small Extracellular Vesicles Indicate Successful Embryo Implantation during Early Pregnancy. Cells 9:3, pages 645.
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Chenglong Wang, Hong Yang, Yan Liu, Bing He, Fenting Lei, Ming Jia, Xiu Zheng, Wei Ren & Chunhong Li. (2022) Recent Advances in Extracellular Vesicle-Based Drug Delivery Systems for Treating Inflammation. SSRN Electronic Journal.
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Determination of variability due to biological and technical variation in urinary extracellular vesicles as a crucial step in biomarker discovery studies

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Determination of variability due to biological and technical variation in urinary extracellular vesicles as a crucial step in biomarker discovery studies

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