Citations (25)
Keep up to date with the latest research on this topic with citation updates for this article.
Articles from other publishers (25)
Sergey V. Razin, Sergey V. Ulianov & Olga V. Iarovaia. (2023) Enhancer Function in the 3D Genome. Genes 14:6, pages 1277.
Crossref
Crossref
Juliette Malfait, Jing Wan & Salvatore Spicuglia. (2023) Epromoters are new players in the regulatory landscape with potential pleiotropic roles. BioEssays.
Crossref
Crossref
Ya-Chien Chan, Eike Kienle, Martin Oti, Antonella Di Liddo, Maria Mendez-Lago, Dominik F. Aschauer, Manuel Peter, Michaela Pagani, Cosmas Arnold, Andreas Vonderheit, Christian Schön, Sebastian Kreuz, Alexander Stark & Simon Rumpel. (2023) An unbiased AAV-STARR-seq screen revealing the enhancer activity map of genomic regions in the mouse brain in vivo. Scientific Reports 13:1.
Crossref
Crossref
Miriam Merenciano & Josefa González. (2023) The Interplay Between Developmental Stage and Environment Underlies the Adaptive Effect of a Natural Transposable Element Insertion. Molecular Biology and Evolution 40:3.
Crossref
Crossref
Kirill Nikitich Kashkin, Elena Sergeevna Kotova, Irina Vasilievna Alekseenko, Svetlana Sergeevna Bulanenkova, Sergey Borisovich Akopov, Eugene Pavlovich Kopantzev, Lev Grigorievich Nikolaev, Igor Pavlovich Chernov & Dmitry Alexandrovich Didych. (2022) Efficient Selection of Enhancers and Promoters from MIA PaCa-2 Pancreatic Cancer Cells by ChIP-lentiMPRA. International Journal of Molecular Sciences 23:23, pages 15011.
Crossref
Crossref
Pengyu Ni, Joshua Moe & Zhengchang Su. (2022) Accurate prediction of functional states of cis-regulatory modules reveals common epigenetic rules in humans and mice. BMC Biology 20:1.
Crossref
Crossref
Mariana Saint Just Ribeiro, Pulak Tripathi, Bahram Namjou, John B. Harley & Iouri Chepelev. (2022) Haplotype-specific chromatin looping reveals genetic interactions of regulatory regions modulating gene expression in 8p23.1. Frontiers in Genetics 13.
Crossref
Crossref
Dongchan Yang, Taesu Chung & Dongsup Kim. (2022) DeepLUCIA: predicting tissue-specific chromatin loops using Deep Learning-based Universal Chromatin Interaction Annotator. Bioinformatics 38:14, pages 3501-3512.
Crossref
Crossref
Payel Banik, Ranabir Majumder, Anik Mandal, Sanjib Dey & Mahitosh Mandal. (2022) A computational study to assess the polymorphic landscape of matrix metalloproteinase 3 promoter and its effects on transcriptional activity. Computers in Biology and Medicine 145, pages 105404.
Crossref
Crossref
Samia Nisar, Magali Torres, Alassane Thiam, Bruno Pouvelle, Florian Rosier, Frederic Gallardo, Oumar Ka, Babacar Mbengue, Rokhaya Ndiaye Diallo, Laura Brosseau, Salvatore Spicuglia, Alioune Dieye, Sandrine Marquet & Pascal Rihet. (2022) Identification of ATP2B4 Regulatory Element Containing Functional Genetic Variants Associated with Severe Malaria. International Journal of Molecular Sciences 23:9, pages 4849.
Crossref
Crossref
Shunichi Shiozawa, Ken Tsumiyama, Yumi Miyazaki, Kenichi Uto, Keiichi Sakurai, Toshie Nakashima, Hiroko Matsuyama, Ai Doi, Miho Tarui, Manabu Izumikawa, Mai Kimura, Yuko Fujita, Chisako Satonaka, Takahiko Horiuchi, Tsukasa Matsubara, Motohiro Oribe, Takashi Yamane, Hidetoshi Kagawa, Quan-Zhen Li, Keiko Mizuno, Yohei Mukai, Kazuhiro Murakami, Takuji Enya, Shota Tsukimoto, Yoshiyuki Hakata, Masaaki Miyazawa & Kazuko Shiozawa. (2022) DOCK8-expressing T follicular helper cells newly generated beyond self-organized criticality cause systemic lupus erythematosus. iScience 25:1, pages 103537.
Crossref
Crossref
Shayne Easterwood & Tae Hoon Kim. 2022. Epigenetics and Anticipation. Epigenetics and Anticipation
39
57
.
Laura V Glaser, Mara Steiger, Alisa Fuchs, Alena van Bömmel, Edda Einfeldt, Ho-Ryun Chung, Martin Vingron & Sebastiaan H Meijsing. (2021) Assessing genome-wide dynamic changes in enhancer activity during early mESC differentiation by FAIRE-STARR-seq. Nucleic Acids Research 49:21, pages 12178-12195.
Crossref
Crossref
Anna Ullastres, Miriam Merenciano & Josefa González. (2021) Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila. Genome Biology 22:1.
Crossref
Crossref
David Santiago-Algarra, Charbel Souaid, Himanshu Singh, Lan T. M. Dao, Saadat Hussain, Alejandra Medina-Rivera, Lucia Ramirez-Navarro, Jaime A. Castro-Mondragon, Nori Sadouni, Guillaume Charbonnier & Salvatore Spicuglia. (2021) Epromoters function as a hub to recruit key transcription factors required for the inflammatory response. Nature Communications 12:1.
Crossref
Crossref
Helen Ray-Jones & Mikhail Spivakov. (2021) Transcriptional enhancers and their communication with gene promoters. Cellular and Molecular Life Sciences 78:19-20, pages 6453-6485.
Crossref
Crossref
Xingjie Ren, Mengchi WangBingkun Li, Kirsty Jamieson, Lina ZhengIan R. JonesBin Li, Maya Asami TakagiJerry Lee, Lenka Maliskova, Tsz Wai TamMiao YuRong Hu, Lindsay LeeArmen AbnousiGang Li, Yun Li, Ming Hu, Bing Ren, Wei Wang & Yin Shen. (2021) Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath. Science Advances 7:38.
Crossref
Crossref
Zhanlin Chen, Jing Zhang, Jason Liu, Yi Dai, Donghoon Lee, Martin Renqiang Min, Min Xu & Mark Gerstein. (2021)
DECODE: a
De
ep-learning framework for
Co
n
de
nsing enhancers and refining boundaries with large-scale functional assays
. Bioinformatics 37:Supplement_1, pages i280-i288.
Crossref
Crossref
Arno Meiler, Fabio Marchiano, Margaux Haering, Manuela Weitkunat, Frank Schnorrer & Bianca H. Habermann. (2021) AnnoMiner is a new web-tool to integrate epigenetics, transcription factor occupancy and transcriptomics data to predict transcriptional regulators. Scientific Reports 11:1.
Crossref
Crossref
Runtao Yang, Feng Wu, Chengjin Zhang & Lina Zhang. (2021) iEnhancer-GAN: A Deep Learning Framework in Combination with Word Embedding and Sequence Generative Adversarial Net to Identify Enhancers and Their Strength. International Journal of Molecular Sciences 22:7, pages 3589.
Crossref
Crossref
Damien J. Downes, Robert A. Beagrie, Matthew E. Gosden, Jelena Telenius, Stephanie J. Carpenter, Lea Nussbaum, Sara De Ornellas, Martin Sergeant, Chris Q. Eijsbouts, Ron Schwessinger, Jon Kerry, Nigel Roberts, Arun Shivalingam, Afaf El-Sagheer, A. Marieke Oudelaar, Tom Brown, Veronica J. Buckle, James O. J. Davies & Jim R. Hughes. (2021) High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale. Nature Communications 12:1.
Crossref
Crossref
Tapan Kumar Mohanta, Dhananjay Yadav, Adil Khan, Abeer Hashem, Baby Tabassum, Abdul Latif Khan, Elsayed Fathi Abd_Allah & Ahmed Al-Harrasi. (2020) Genomics, molecular and evolutionary perspective of NAC transcription factors. PLOS ONE 15:4, pages e0231425.
Crossref
Crossref
Joanna Mitchelmore, Nastasiya F Grinberg, Chris Wallace & Mikhail Spivakov. (2020) Functional effects of variation in transcription factor binding highlight long-range gene regulation by epromoters. Nucleic Acids Research 48:6, pages 2866-2879.
Crossref
Crossref
Haifeng Yan, Yuping Xiong, Jaime A. Teixeira da Silva, Jinhui Pang, Ting Zhang, Xincheng Yu, Xinhua Zhang, Meiyun Niu & Guohua Ma. (2020) Molecular Cloning and Functional Characterization of Bisabolene Synthetase (SaBS) Promoter from Santalum album. Forests 11:1, pages 85.
Crossref
Crossref
Fabienne Bejjani, Emilie Evanno, Kazem Zibara, Marc Piechaczyk & Isabelle Jariel-Encontre. (2019) The AP-1 transcriptional complex: Local switch or remote command?. Biochimica et Biophysica Acta (BBA) - Reviews on Cancer 1872:1, pages 11-23.
Crossref
Crossref