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Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization Volume 5, 2017 - Issue 5: Special Issue: Medical Image Understanding and Analysis

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Segmentation of phase contrast microscopy images based on multi-scale local Basic Image Features histograms

N. JaccardDepartment of Computer Science, University College London, London, UK

http://orcid.org/0000-0002-3997-6532 View further author information

N. SzitaDepartment of Biochemical Engineering, University College London, London, UK

http://orcid.org/0000-0002-6204-5074 View further author information

L.D. GriffinDepartment of Computer Science, University College London, London, UKCorrespondence[email protected]

http://orcid.org/0000-0001-6286-2018 View further author information

Pages 359-367 | Received 06 Nov 2014, Accepted 03 Feb 2015, Published online: 07 Apr 2015

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https://doi.org/10.1080/21681163.2015.1016243
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Liang Han, Hang Su & Zhaozheng Yin. (2023) Phase Contrast Image Restoration by Formulating Its Imaging Principle and Reversing the Formulation With Deep Neural Networks. IEEE Transactions on Medical Imaging 42:4, pages 1068-1082.
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Yue Han, Yang Lei, Viktor Shkolnikov, Daisy Xin, Steven Barcelo, Jan Allebach & Edward J. Delp. (2022) Label-Free Mammalian Cell Tracking Enhanced by Precomputed Velocity Fields. Label-Free Mammalian Cell Tracking Enhanced by Precomputed Velocity Fields.

Gal Rosoff, Shir Elkabetz & Levi A. Gheber. (2022) Machine-Learning-Aided Quantification of Area Coverage of Adherent Cells from Phase-Contrast Images. Microscopy and Microanalysis, pages 1-8.
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Hongju Jo, Junghun Han, Yoon Suk Kim, Yongheum Lee & Sejung Yang. (2021) A Novel Method for Effective Cell Segmentation and Tracking in Phase Contrast Microscopic Images. Sensors 21:10, pages 3516.
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Yi-Hsien Chen, Yo Sasaki, Aaron DiAntonio & Jeffrey Milbrandt. (2021) SARM1 is required in human derived sensory neurons for injury-induced and neurotoxic axon degeneration. Experimental Neurology 339, pages 113636.
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Jorge Aranda Hernandez, Christopher Heuer, Janina Bahnemann & Nicolas Szita. 2022. Microfluidics in Biotechnology. Microfluidics in Biotechnology 101 127 .

Maitreya Maity, Ayush Jaiswal, Kripasindhu Gantait, Jyotirmoy Chatterjee & Anirban Mukherjee. (2020) Quantification of malaria parasitaemia using trainable semantic segmentation and capsnet. Pattern Recognition Letters 138, pages 88-94.
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Jie Chi, Jiabei Wang & Xing Zhang. (2020) Visualization of Low-Permeability Natural Core Carbon Dioxide Immiscible Flooding Flow Characteristics. IEEE Access 8, pages 142303-142311.
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Jasna Maver & Danijel Skočaj. (2019) EL: Local Image Descriptor Based on Extreme Responses to Partial Derivatives of 2D Gaussian Function. Mathematical Problems in Engineering 2019, pages 1-10.
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Lewis D. Griffin. (2019) The Atlas Structure of Images. IEEE Transactions on Pattern Analysis and Machine Intelligence 41:1, pages 234-245.
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Hsieh-Fu Tsai, Joanna Gajda, Tyler F.W. Sloan, Andrei Rares & Amy Q. Shen. (2019) Usiigaci: Instance-aware cell tracking in stain-free phase contrast microscopy enabled by machine learning. SoftwareX 9, pages 230-237.
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Yuen Hang Ho, Humaira Nisar & Muhammad Burhan Khan. (2018) Segmentation of Activated Sludge Filaments using Phase Contrast Images. Oriental journal of computer science and technology 11:3, pages 145-153.
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Mark L. Lalli, Brooke Wojeski & Anand R. Asthagiri. (2016) Label-Free Automated Cell Tracking: Analysis of the Role of E-cadherin Expression in Collective Electrotaxis. Cellular and Molecular Bioengineering 10:1, pages 89-101.
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Alexandre Super, Nicolas Jaccard, Marco Paulo Cardoso Marques, Rhys Jarred Macown, Lewis Donald Griffin, Farlan Singh Veraitch & Nicolas Szita. (2016) Real-time monitoring of specific oxygen uptake rates of embryonic stem cells in a microfluidic cell culture device. Biotechnology Journal 11:9, pages 1179-1189.
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Segmentation of phase contrast microscopy images based on multi-scale local Basic Image Features histograms

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Segmentation of phase contrast microscopy images based on multi-scale local Basic Image Features histograms

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