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Chronobiology International
The Journal of Biological and Medical Rhythm Research
Volume 20, 2003 - Issue 3
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The Circadian E-Box: When Perfect Is Not Good Enough

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Pages 371-388 | Published online: 07 Jul 2009

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Xiaohong Zuo, Shu Liu, Qingling Lin, Ning Li, Piu Chan & Yanning Cai. (2012) Circadian E-boxes and surrounding CpG islands are free from methylation throughout the day. Biological Rhythm Research 43:2, pages 159-165.
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Yanning Cai, Shu Liu, RobertB. Sothern, Ning Li, Yunqian Guan & Piu Chan. (2009) Epigenetic analysis of mPer1 promoter in peripheral tissues. Biological Rhythm Research 40:6, pages 445-453.
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M. Yúfera, E. Perera, J. A. Mata-Sotres, J. Calduch-Giner, G. Martínez-Rodríguez & J. Pérez-Sánchez. (2017) The circadian transcriptome of marine fish (Sparus aurata) larvae reveals highly synchronized biological processes at the whole organism level. Scientific Reports 7:1.
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Nan Jiang, Zixu Wang, Jing Cao, Yulan Dong & Yaoxing Chen. (2016) Role of monochromatic light on daily variation of clock gene expression in the pineal gland of chick. Journal of Photochemistry and Photobiology B: Biology 164, pages 57-64.
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José M. Duhart, Lucila Brocardo, Malena L. Mul Fedele, Angelo Guglielmotti & Diego A. Golombek. (2016) CCL2 mediates the circadian response to low dose endotoxin. Neuropharmacology 108, pages 373-381.
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Sudeep Bose, Surajit Ganguly, Sachin Kumar & Fredric R. Boockfor. (2016) A Pit-1 Binding Site Adjacent to E-box133 in the Rat PRL Promoter is Necessary for Pulsatile Gene Expression Activity. Neurochemical Research 41:6, pages 1390-1400.
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Shuting Cheng, Xin Liang, Yuhui Wang, Zhou Jiang, Yanyou Liu, Wang Hou, Shiping Li, Jing Zhang & Zhengrong Wang. (2015) The circadian Clock gene regulates acrosin activity of sperm through serine protease inhibitor A3K . Experimental Biology and Medicine 241:2, pages 205-215.
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Janusz Blasiak, Russel J. Reiter & Kai Kaarniranta. (2016) Melatonin in Retinal Physiology and Pathology: The Case of Age-Related Macular Degeneration. Oxidative Medicine and Cellular Longevity 2016, pages 1-12.
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Wei-Dar Chen, Jih-Kai Yeh, Meng-Ting Peng, Shian-Sen Shie, Shuei-Liong Lin, Chia-Hung Yang, Tien-Hsing Chen, Kuo-Chun Hung, Chun-Chieh Wang, I-Chang Hsieh, Ming-Shien Wen & Chao-Yung Wang. (2015) Circadian CLOCK Mediates Activation of Transforming Growth Factor-β Signaling and Renal Fibrosis through Cyclooxygenase 2. The American Journal of Pathology 185:12, pages 3152-3163.
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Analía E. Castro, Sergio G. Benitez, Luz E. Farias Altamirano, Luis E. Savastano, Sean I. Patterson & Estela M. Muñoz. (2015) Expression and cellular localization of the transcription factor NeuroD1 in the developing and adult rat pineal gland. Journal of Pineal Research 58:4, pages 439-451.
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Shu-qun Shi, Terry Jo Bichell, Rebecca A. Ihrie & Carl Hirschie Johnson. (2015) Ube3a Imprinting Impairs Circadian Robustness in Angelman Syndrome Models. Current Biology 25:5, pages 537-545.
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Andrés Romanowski, Matías Javier Garavaglia, María Eugenia Goya, Pablo Daniel Ghiringhelli & Diego Andrés Golombek. (2014) Potential Conservation of Circadian Clock Proteins in the phylum Nematoda as Revealed by Bioinformatic Searches. PLoS ONE 9:11, pages e112871.
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Wei-Dar Chen, Ming-Shien Wen, Shian-Sen Shie, Yu-Lun Lo, Hung-Ta Wo, Chun-Chieh Wang, I-Chang Hsieh, Tsong-Hai Lee & Chao-Yung Wang. (2014) The circadian rhythm controls telomeres and telomerase activity. Biochemical and Biophysical Research Communications 451:3, pages 408-414.
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Mo-Xian Chen, Yue-Ning Yang, Shu-Xiao Zheng, Chao Xu, Ying Wang, Jie-Sheng Liu, Wei-Dong Yang, Mee-Len Chye & Hong-Ye Li. (2013) A Vigna radiata 8S Globulin α′ Promoter Drives Efficient Expression of GUS in Arabidopsis Cotyledonary Embryos. Journal of Agricultural and Food Chemistry 61:26, pages 6423-6429.
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Zixi Wang, Yaling Wu, Lanfen Li & Xiao-Dong Su. (2012) Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA. Cell Research 23:2, pages 213-224.
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Lior Appelbaum, Gordon Wang, Tohei Yokogawa, Gemini M. Skariah, Stephen J. Smith, Philippe Mourrain & Emmanuel Mignot. (2010) Circadian and Homeostatic Regulation of Structural Synaptic Plasticity in Hypocretin Neurons. Neuron 68:1, pages 87-98.
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P Iuvone, E Velarde, M Delgado, A Alonso-Gomez & R Haque. 2010. Biological Clock in Fish. Biological Clock in Fish 251 259 .
Sudeep Bose & Fredric R. Boockfor. (2010) Episodes of Prolactin Gene Expression in GH3 Cells Are Dependent on Selective Promoter Binding of Multiple Circadian Elements. Endocrinology 151:5, pages 2287-2296.
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Gianluca Tosini, Nikita Pozdeyev, Katsuhiko Sakamoto & P. Michael Iuvone. (2008) The circadian clock system in the mammalian retina. BioEssays 30:7, pages 624-633.
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I.V. Zhdanova, L. Yu, M. Lopez-Patino, E. Shang, S. Kishi & E. Guelin. (2008) Aging of the circadian system in zebrafish and the effects of melatonin on sleep and cognitive performance. Brain Research Bulletin 75:2-4, pages 433-441.
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Estela M. Muñoz, Michael J. Bailey, Martin F. Rath, Qiong Shi, Fabrice Morin, Steven L. Coon, Morten Møller & David C. Klein. (2007) NeuroD1: developmental expression and regulated genes in the rodent pineal gland. Journal of Neurochemistry 102:3, pages 887-899.
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David C. Klein. (2007) Arylalkylamine N-Acetyltransferase: “the Timezyme”. Journal of Biological Chemistry 282:7, pages 4233-4237.
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Lior Appelbaum & Yoav Gothilf. (2006) Mechanism of pineal-specific gene expression: The role of E-box and photoreceptor conserved elements. Molecular and Cellular Endocrinology 252:1-2, pages 27-33.
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Robin Vuilleumier, Laurence Besseau, Gilles Boeuf, Aurélien Piparelli, Yoav Gothilf, Walter G. Gehring, David C. Klein & Jack Falcón. (2006) Starting the Zebrafish Pineal Circadian Clock with a Single Photic Transition. Endocrinology 147:5, pages 2273-2279.
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P. Michael Iuvone, Gianluca Tosini, Nikita Pozdeyev, Rashidul Haque, David C. Klein & Shyam S. Chaurasia. (2005) Circadian clocks, clock networks, arylalkylamine N-acetyltransferase, and melatonin in the retina. Progress in Retinal and Eye Research 24:4, pages 433-456.
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Gilles M. Leclerc & Fredric R. Boockfor. (2005) Pulses of Prolactin Promoter Activity Depend on a Noncanonical E-Box that Can Bind the Circadian Proteins CLOCK and BMAL1. Endocrinology 146:6, pages 2782-2790.
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Katsutaka OISHI, Hidenori SHIRAI & Norio ISHIDA. (2005) CLOCK is involved in the circadian transactivation of peroxisome-proliferator-activated receptor α ( PPAR α) in mice . Biochemical Journal 386:3, pages 575-581.
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Lior Appelbaum, Ana Anzulovich, Ruben Baler & Yoav Gothilf. (2005) Homeobox-Clock Protein Interaction in Zebrafish. Journal of Biological Chemistry 280:12, pages 11544-11551.
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Blynn G. Bunney, Steven G. Potkin & William E. Bunney. 2005. Biology of Depression. Biology of Depression 467 492 .
Diego A Golombek, Patricia V Agostino, Santiago A Plano & Gabriela A Ferreyra. (2004) Signaling in the mammalian circadian clock: the NO/cGMP pathway. Neurochemistry International 45:6, pages 929-936.
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Patrice A. Salomé & C. Robertson McClung. (2016) The Arabidopsis thaliana Clock. Journal of Biological Rhythms 19:5, pages 425-435.
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David C. Klein. (2016) The 2004 Aschoff/Pittendrigh Lecture: Theory of the Origin of the Pineal Gland— A Tale of Conflict and Resolution. Journal of Biological Rhythms 19:4, pages 264-279.
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