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ORIGINAL ARTICLE

Succession and community composition of ammonia-oxidizing archaea and bacteria in bulk soil of a Japanese paddy field

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Pages 212-219 | Received 02 Sep 2009, Accepted 20 Dec 2009, Published online: 21 Dec 2010

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Liuqin Huang, Hailiang Dong, Shang Wang, Qiuyuan Huang & Hongchen Jiang. (2014) Diversity and Abundance of Ammonia-Oxidizing Archaea and Bacteria in Diverse Chinese Paddy Soils. Geomicrobiology Journal 31:1, pages 12-22.
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Takeshi Watanabe, Chol Gyu Lee, Jun Murase, Susumu Asakawa & Makoto Kimura. (2011) Carbon flow into ammonia-oxidizing bacteria and archaea during decomposition of 13C-labeled plant residues in soil. Soil Science and Plant Nutrition 57:6, pages 775-785.
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Peng Chen, Junzeng Xu, Zhongxue Zhang, Tangzhe Nie, Kechun Wang & Hang Guo. (2022) Where the straw-derived nitrogen gone in paddy field subjected to different irrigation regimes and straw placement depths? Evidence from 15N labeling. Agricultural Water Management 273, pages 107921.
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Ling Wang, Kun Li, Yaqi Song, Qin Gong, Hongbing Chen & Zhaohua Li. (2021) Potential effect of nitrate applied during flood period on N2O emissions during subsequent drainage in a paddy soil. European Journal of Soil Biology 103, pages 103293.
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Xiaomeng Wei, Zhenke Zhu, Liang Wei, Jinshui Wu & Tida Ge. (2019) Biogeochemical cycles of key elements in the paddy-rice rhizosphere: Microbial mechanisms and coupling processes. Rhizosphere 10, pages 100145.
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Ling Wang, Kun Li, Rong Sheng, Zhaohua Li & Wenxue Wei. (2019) Remarkable N2O emissions by draining fallow paddy soil and close link to the ammonium-oxidizing archaea communities. Scientific Reports 9:1.
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Nozomi Yamamoto & Yutaka Nakai. 2019. Understanding Terrestrial Microbial Communities. Understanding Terrestrial Microbial Communities 151 172 .
Hussnain Mukhtar, Yu-Pin Lin & Johnathen Anthony. (2017) Ammonia Oxidizing Archaea and Bacteria in East Asian Paddy Soils—A Mini Review. Environments 4:4, pages 84.
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Huifeng Liu, Xing Wu, Qing Wang, Shuai Wang, Dan Liu & Guohua Liu. (2017) Responses of soil ammonia oxidation and ammonia-oxidizing communities to land-use conversion and fertilization in an acidic red soil of southern China. European Journal of Soil Biology 80, pages 110-120.
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Jichen Wang, Lei Ni, Yang Song, Geoff Rhodes, Jing Li, Qiwei Huang & Qirong Shen. (2017) Dynamic Response of Ammonia-Oxidizers to Four Fertilization Regimes across a Wheat-Rice Rotation System. Frontiers in Microbiology 8.
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Gastón Azziz, Tania Trasante, Jorge Monza & Pilar Irisarri. (2016) The effect of soil type, rice cultivar and water management on ammonia-oxidizing archaea and bacteria populations. Applied Soil Ecology 100, pages 8-17.
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Qiufang Zhang, Fangyuan Tang, Yangjing Zhou, Jirong Xu, Heping Chen, Mingkuang Wang & Hendrikus J. Laanbroek. (2015) Shifts in the pelagic ammonia-oxidizing microbial communities along the eutrophic estuary of Yong River in Ningbo City, China. Frontiers in Microbiology 6.
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Kozue Sawada & Koki Toyota. (2015) Effects of the Application of Digestates from Wet and Dry Anaerobic Fermentation to Japanese Paddy and Upland Soils on Short-Term Nitrification. Microbes and environments Microbes and Environments 30:1, pages 37-43.
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Naomi S. Wells, Tim J. Clough, Sarah E. Johnson-Beebout & Roland J. Buresh. (2014) Land management between crops affects soil inorganic nitrogen balance in a tropical rice system. Nutrient Cycling in Agroecosystems 100:3, pages 315-332.
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Jing Wang, Weidong Wang & Ji-Dong Gu. (2013) Community structure and abundance of ammonia-oxidizing archaea and bacteria after conversion from soybean to rice paddy in albic soils of Northeast China. Applied Microbiology and Biotechnology 98:6, pages 2765-2778.
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Xiubin Ke, Roey Angel, Yahai Lu & Ralf Conrad. (2013) Niche differentiation of ammonia oxidizers and nitrite oxidizers in rice paddy soil. Environmental Microbiology 15:8, pages 2275-2292.
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Elizabeth French, Jessica A. Kozlowski, Maitreyee Mukherjee, George Bullerjahn & Annette Bollmann. (2012) Ecophysiological Characterization of Ammonia-Oxidizing Archaea and Bacteria from Freshwater. Applied and Environmental Microbiology 78:16, pages 5773-5780.
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Yucheng Wu, Lu Lu, Baozhan Wang, Xiangui Lin, Jianguo Zhu, Zucong Cai, Xiaoyuan Yan & Zhongjun Jia. (2011) Long-Term Field Fertilization Significantly Alters Community Structure of Ammonia-Oxidizing Bacteria rather than Archaea in a Paddy Soil. Soil Science Society of America Journal 75:4, pages 1431-1439.
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Xin Chen, Li-Mei Zhang, Ju-Pei Shen, Wen-Xue Wei & Ji-Zheng He. (2011) Abundance and community structure of ammonia-oxidizing archaea and bacteria in an acid paddy soil. Biology and Fertility of Soils 47:3, pages 323-331.
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Zuojun Wu, Liangdong Zou, Diannan Lu & Zheng Liu. (2011) Restoration of taxonomic and functional genes after bioaugmentation of petroleum contaminated soil. Journal of Environmental Monitoring 13:10, pages 2904.
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Lei Wu, Shuirong Tang, Ronggui Ronggui, Jun Wang, Pengpeng Duan, Cong Xu, Wenju Zhang & Minggang Xu. (2022) Increased Soil N2o Emission During Drainage is Mitigated by Inputs of Labile Carbon and Amplified by Nitrogen. SSRN Electronic Journal.
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