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Molecular and Cellular Biology Volume 27, 2007 - Issue 8
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Article

ELA1 and CUL3 Are Required Along with ELC1 for RNA Polymerase II Polyubiquitylation and Degradation in DNA-Damaged Yeast Cells

Balazs RibarDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas77555-1061
,
Louise PrakashDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas77555-1061
&
Satya PrakashDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas77555-1061Correspondence[email protected]
Pages 3211-3216 | Received 16 Jan 2007, Accepted 06 Feb 2007, Published online: 27 Mar 2023

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Anna Domanska & Joanna Kaminska. (2015) Role of Rsp5 ubiquitin ligase in biogenesis of rRNA, mRNA and tRNA in yeast. RNA Biology 12:12, pages 1265-1274.
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Kristijan Ramadan. (2012) p97/VCP- and Lys48-linked polyubiquitination form a new signaling pathway in DNA damage response. Cell Cycle 11:6, pages 1062-1069.
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Xuefeng Chen, Christine Ruggiero & Shisheng Li. (2007) Yeast Rpb9 Plays an Important Role in Ubiquitylation and Degradation of Rpb1 in Response to UV-Induced DNA Damage. Molecular and Cellular Biology 27:13, pages 4617-4625.
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Swarnab Sengupta & Elah Pick. (2023) The Ubiquitin-like Proteins of Saccharomyces cerevisiae. Biomolecules 13:5, pages 734.
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Feilong Chen, Beibei Liu, Hao Zhou & Jiafu Long. (2022) The Paf1 complex is required for RNA polymerase II removal in response to DNA damage. Proceedings of the National Academy of Sciences 119:40.
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Verena Hurst, Kiran Challa, Felix Jonas, Romain Forey, Ragna Sack, Jan Seebacher, Christoph D Schmid, Naama Barkai, Kenji Shimada, Susan M Gasser & Jérôme Poli. (2021) A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress. The EMBO Journal 40:21.
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Yanfeng HeShigeo SatoChieri Tomomori-SatoShiyuan ChenZach H. GoodeJoan W. Conaway & Ronald C. Conaway. (2021) Elongin functions as a loading factor for Mediator at ATF6α-regulated ER stress response genes. Proceedings of the National Academy of Sciences 118:39.
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Juston C. Weems, Brian D. Slaughter, Jay R. Unruh, Kyle J. Weaver, Brandon D. Miller, Kym M. Delventhal, Joan W. Conaway & Ronald C. Conaway. (2021) A role for the Cockayne Syndrome B (CSB)-Elongin ubiquitin ligase complex in signal-dependent RNA polymerase II transcription. Journal of Biological Chemistry 297:1, pages 100862.
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Yating Wang, Liming Hou, M. Behfar Ardehali, Robert E. Kingston & Brian D. Dynlacht. (2021) Elongin A regulates transcription in vivo through enhanced RNA polymerase processivity. Journal of Biological Chemistry 296, pages 100170.
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Melvin Noe Gonzalez, Daniel Blears & Jesper Q. Svejstrup. (2020) Causes and consequences of RNA polymerase II stalling during transcript elongation. Nature Reviews Molecular Cell Biology 22:1, pages 3-21.
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Irina Heckmann, Maximilian J. Kern, Boris Pfander & Stefan Jentsch. (2019) A SUMO-dependent pathway controls elongating RNA Polymerase II upon UV-induced damage. Scientific Reports 9:1.
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Ronald C. Conaway & Joan W. Conaway. (2019) The hunt for RNA polymerase II elongation factors: a historical perspective. Nature Structural & Molecular Biology 26:9, pages 771-776.
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Haoyang Jiang, Marley Wolgast, Laura M. Beebe & Joseph C. Reese. (2019) Ccr4–Not maintains genomic integrity by controlling the ubiquitylation and degradation of arrested RNAPII. Genes & Development 33:11-12, pages 705-717.
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Takuya Tomita & Andreas Matouschek. (2019) Substrate selection by the proteasome through initiation regions. Protein Science.
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Mingyue YaoSiddiq Ur RahmanAilan WangTao MaSayed Haidar Abbas RazaRashid MehmoodYanlin LiuShiheng Tao. (2019) Evolutionary Analysis of the F-Box Gene Family in Saccharomycetaceae. DNA and Cell Biology 38:4, pages 333-340.
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Juston C. Weems, Jay R. Unruh, Brian D. Slaughter, Ronald C. Conaway & Joan W. Conaway. (2019) Imaging-based assays for investigating functions of the RNA polymerase II elongation factor Elongin and the Elongin ubiquitin ligase. Methods 159-160, pages 157-164.
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Changshin Kim, Jinmo Yang, Su-Hyun Jeong, Hayoung Kim, Geun-hee Park, Hwa Beom Shin, MyungJa Ro, Kyoung-Yeon Kim, YoungJoon Park, Keun Pil Kim & KyuBum Kwack. (2018) Yeast-based assays for characterization of the functional effects of single nucleotide polymorphisms in human DNA repair genes. PLOS ONE 13:3, pages e0193823.
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Nivedita DamodarenTrevor Van EeuwenJoanna ZamelEnrique Lin-Shiao, Nir KalismanKenji Murakami. (2017) Def1 interacts with TFIIH and modulates RNA polymerase II transcription. Proceedings of the National Academy of Sciences 114:50, pages 13230-13235.
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Ignacio Torrecilla, Judith Oehler & Kristijan Ramadan. (2017) The role of ubiquitin-dependent segregase p97 (VCP or Cdc48) in chromatin dynamics after DNA double strand breaks. Philosophical Transactions of the Royal Society B: Biological Sciences 372:1731, pages 20160282.
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Natalia Gómez-Navarro, Lorena Peiró-Chova & Francisco Estruch. (2017) Iwr1 facilitates RNA polymerase II dynamics during transcription elongation. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860:7, pages 803-811.
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An-Yun Chang, Stephane E. Castel, Evan Ernst, Hyun Soo Kim & Robert A. Martienssen. (2017) The Conserved RNA Binding Cyclophilin, Rct1, Regulates Small RNA Biogenesis and Splicing Independent of Heterochromatin Assembly. Cell Reports 19:12, pages 2477-2489.
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Anne Lafon, Surayya Taranum, Federico Pietrocola, Florent Dingli, Damarys Loew, Sandipan Brahma, Blaine Bartholomew & Manolis Papamichos-Chronakis. (2015) INO80 Chromatin Remodeler Facilitates Release of RNA Polymerase II from Chromatin for Ubiquitin-Mediated Proteasomal Degradation. Molecular Cell 60:5, pages 784-796.
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Marcus D. Wilson, Michelle Harreman, Michael Taschner, James Reid, Jane Walker, Hediye Erdjument-Bromage, Paul Tempst & Jesper Q. Svejstrup. (2013) Proteasome-Mediated Processing of Def1, a Critical Step in the Cellular Response to Transcription Stress. Cell 154:5, pages 983-995.
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Marcus D. Wilson, Michelle Harreman & Jesper Q. Svejstrup. (2013) Ubiquitylation and degradation of elongating RNA polymerase II: The last resort. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:1, pages 151-157.
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