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Molecular and Cellular Biology Volume 28, 2008 - Issue 12
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Article

Functional Interaction between the Fab-7 and Fab-8 Boundaries and the Upstream Promoter Region in the Drosophila Abd-B Gene

Olga KyrchanovaDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov St., Moscow119334, Russia
,
Stepan ToshchakovDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov St., Moscow119334, Russia
,
Yulia PodstreshnayaDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov St., Moscow119334, Russia
,
Alexander ParshikovDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov St., Moscow119334, Russia
&
Pavel GeorgievDepartment of the Control of Genetic Processes, Institute of Gene Biology, Russian Academy of Sciences, 34/5 Vavilov St., Moscow119334, RussiaCorrespondence[email protected]
Pages 4188-4195 | Received 12 Feb 2008, Accepted 05 Apr 2008, Published online: 27 Mar 2023

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Mo Li, Zhibo Ma, Jiayang K. Liu, Sharmila Roy, Sapna K. Patel, Derrick C. Lane & Haini N. Cai. (2015) An Organizational Hub of Developmentally Regulated Chromatin Loops in the Antennapedia Complex. Molecular and Cellular Biology 35:23, pages 4018-4029.
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Olga Kyrchanova, Vladimir Sokolov & Pavel Georgiev. (2023) Mechanisms of Interaction between Enhancers and Promoters in Three Drosophila Model Systems. International Journal of Molecular Sciences 24:3, pages 2855.
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Maksim Erokhin, Fedor Gorbenko, Dmitry Lomaev, Marina Yu Mazina, Anna Mikhailova, Azat K. Garaev, Aleksander Parshikov, Nadezhda E. Vorobyeva, Pavel Georgiev, Paul Schedl & Darya Chetverina. (2021) Boundaries potentiate polycomb response element-mediated silencing. BMC Biology 19:1.
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Silvia Meyer-Nava, Victor E. Nieto-Caballero, Mario Zurita & Viviana Valadez-Graham. (2020) Insights into HP1a-Chromatin Interactions. Cells 9:8, pages 1866.
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Olga Kyrchanova, Daniel Wolle, Marat Sabirov, Amina Kurbidaeva, Tsutomu Aoki, Oksana Maksimenko, Maria Kyrchanova, Pavel Georgiev & Paul Schedl. (2019) Distinct Elements Confer the Blocking and Bypass Functions of the Bithorax Fab-8 Boundary . Genetics 213:3, pages 865-876.
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Özdemir & Gambetta. (2019) The Role of Insulation in Patterning Gene Expression. Genes 10:10, pages 767.
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Pawel Piwko, Ilektra Vitsaki, Ioannis Livadaras & Christos Delidakis. (2019) The Role of Insulators in Transgene Transvection in Drosophila . Genetics 212:2, pages 489-508.
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N. E. Postika, T. A. Ivlieva, P. G. Georgiev & O. V. Kyrchanova. (2019) Study of dCTCF Insulator Activity in Drosophilamelanogaster Model Systems. Doklady Biochemistry and Biophysics 486:1, pages 187-191.
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A. Buchman & O. S. Akbari. (2018) Site‐specific transgenesis of the Drosophila melanogaster Y‐chromosome using CRISPR/Cas9 . Insect Molecular Biology 28:1, pages 65-73.
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Nikolay Postika, Mario Metzler, Markus Affolter, Martin Müller, Paul Schedl, Pavel Georgiev & Olga Kyrchanova. (2018) Boundaries mediate long-distance interactions between enhancers and promoters in the Drosophila Bithorax complex. PLOS Genetics 14:12, pages e1007702.
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Maria Cristina Gambetta & Eileen E M Furlong. (2018) The Insulator Protein CTCF Is Required for Correct Hox Gene Expression, but Not for Embryonic Development in Drosophila . Genetics 210:1, pages 129-136.
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Anna B. Buchman, Tobin Ivy, John M. Marshall, Omar S. Akbari & Bruce A. Hay. (2018) Engineered Reciprocal Chromosome Translocations Drive High Threshold, Reversible Population Replacement in Drosophila. ACS Synthetic Biology 7:5, pages 1359-1370.
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Nikolay Zolotarev, Oksana Maksimenko, Olga Kyrchanova, Elena Sokolinskaya, Igor Osadchiy, Charles Girardot, Artem Bonchuk, Lucia Ciglar, Eileen E. M. Furlong & Pavel Georgiev. (2017) Opbp is a new architectural/insulator protein required for ribosomal gene expression. Nucleic Acids Research 45:21, pages 12285-12300.
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Darya Chetverina, Miki Fujioka, Maksim Erokhin, Pavel Georgiev, James B. Jaynes & Paul Schedl. (2017) Boundaries of loop domains (insulators): Determinants of chromosome form and function in multicellular eukaryotes. BioEssays 39:3, pages 1600233.
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Yuri B Schwartz & Giacomo Cavalli. (2017) Three-Dimensional Genome Organization and Function in Drosophila . Genetics 205:1, pages 5-24.
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Olga Kyrchanova, Nikolay Zolotarev, Vladic Mogila, Oksana Maksimenko, Paul Schedl & Pavel Georgiev. (2017) Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax Complex. Development.
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F. Bantignies & G. Cavalli. 2017. Polycomb Group Proteins. Polycomb Group Proteins 131 163 .
Olga Kyrchanova, Vladic Mogila, Daniel Wolle, Girish Deshpande, Alexander Parshikov, Fabienne Cléard, Francois Karch, Paul Schedl & Pavel Georgiev. (2016) Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax Complex. PLOS Genetics 12:7, pages e1006188.
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Nikolay Zolotarev, Anna Fedotova, Olga Kyrchanova, Artem Bonchuk, Aleksey A. Penin, Andrey S. Lando, Irina A. Eliseeva, Ivan V. Kulakovskiy, Oksana Maksimenko & Pavel Georgiev. (2016) Architectural proteins Pita, Zw5,and ZIPIC contain homodimerization domain and support specific long-range interactions in Drosophila . Nucleic Acids Research, pages gkw371.
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Miki Fujioka, Hemlata Mistry, Paul Schedl & James B. Jaynes. (2016) Determinants of Chromosome Architecture: Insulator Pairing in cis and in trans. PLOS Genetics 12:2, pages e1005889.
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Artem Bonchuk, Oksana Maksimenko, Olga Kyrchanova, Tatyana Ivlieva, Vladic Mogila, Girish Deshpande, Daniel Wolle, Paul Schedl & Pavel Georgiev. (2015) Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biology 13:1.
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Olga Kyrchanova, Vladic Mogila, Daniel Wolle, Jose Paolo Magbanua, Robert White, Pavel Georgiev & Paul Schedl. (2015) The boundary paradox in the Bithorax complex. Mechanisms of Development 138, pages 122-132.
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Navneet Matharu & Sajad Ahanger. (2015) Chromatin Insulators and Topological Domains: Adding New Dimensions to 3D Genome Architecture. Genes 6:3, pages 790-811.
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O. V. Kyrchanova & P. G. Georgiev. (2015) The bithorax complex of Drosophila melanogaster as a model for studying specific long-distance interactions between enhancers and promoters. Russian Journal of Genetics 51:5, pages 440-448.
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Oksana Maksimenko, Marek Bartkuhn, Viacheslav Stakhov, Martin Herold, Nickolay Zolotarev, Theresa Jox, Melanie K. Buxa, Ramona Kirsch, Artem Bonchuk, Anna Fedotova, Olga Kyrchanova, Rainer Renkawitz & Pavel Georgiev. (2015) Two new insulator proteins, Pita and ZIPIC, target CP190 to chromatin. Genome Research 25:1, pages 89-99.
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Darya Chetverina, Tsutomu Aoki, Maksim Erokhin, Pavel Georgiev & Paul Schedl. (2014) Making connections: Insulators organize eukaryotic chromosomes into independent cis - regulatory networks . BioEssays 36:2, pages 163-172.
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Olga Kyrchanova & Pavel Georgiev. (2014) Chromatin insulators and long-distance interactions in Drosophila . FEBS Letters 588:1, pages 8-14.
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D. A. Chetverina, P. V. Elizaryev, P. G. Georgiev & M. M. Erokhin. (2013) 1A2 Insulator can interact with promoter of hsp70 gene in D. melanogaster. Russian Journal of Genetics 49:4, pages 371-379.
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Olga Kyrchanova, Tatiana Ivlieva, Stepan Toshchakov, Alexander Parshikov, Oksana Maksimenko & Pavel Georgiev. (2011) Selective interactions of boundaries with upstream region of Abd-B promoter in Drosophila bithorax complex and role of dCTCF in this process. Nucleic Acids Research 39:8, pages 3042-3052.
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O. V. Kyrchanova & P. G. Georgiev. (2010) Functional interaction between an insulator and a Pc-dependent silencer by the example of the Mcp boundary of the Drosophila melanogaster Abd-B gene. Russian Journal of Genetics 46:5, pages 521-529.
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