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Molecular and Cellular Biology Volume 32, 2012 - Issue 16
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Article

Saccharomyces cerevisiae Ribosomal Protein L26 Is Not Essential for Ribosome Assembly and Function

Reyes Babianoa Departamento de Genética, Universidad de Sevilla, Seville, Spain
,
Michael Gamalindab Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA
,
John L. Woolford Jr.b Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, USACorrespondence[email protected] [email protected]
&
Jesús de la Cruza Departamento de Genética, Universidad de Sevilla, Seville, SpainCorrespondence[email protected] [email protected]
Pages 3228-3241 | Received 25 Apr 2012, Accepted 01 Jun 2012, Published online: 20 Mar 2023

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Jason Talkish, Ian Winsten Campbell, Aarti Sahasranaman, Jelena Jakovljevic & John L. Woolford$suffix/text()$suffix/text(). (2014) Ribosome Assembly Factors Pwp1 and Nop12 Are Important for Folding of 5.8S rRNA during Ribosome Biogenesis in . Molecular and Cellular Biology 34:10, pages 1863-1877.
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Ilia Kats, Christian Reinbold, Marc Kschonsak, Anton Khmelinskii, Laura Armbruster, Thomas Ruppert & Michael Knop. (2021) Up-regulation of ubiquitin–proteasome activity upon loss of NatA-dependent N-terminal acetylation. Life Science Alliance 5:2, pages e202000730.
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Gisela Pöll, Michael Pilsl, Joachim Griesenbeck, Herbert Tschochner & Philipp Milkereit. (2021) Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors. PLOS ONE 16:11, pages e0252497.
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Gerald Ryan R. Aquino, Philipp Hackert, Nicolai Krogh, Kuan-Ting Pan, Mariam Jaafar, Anthony K. Henras, Henrik Nielsen, Henning Urlaub, Katherine E. Bohnsack & Markus T. Bohnsack. (2021) The RNA helicase Dbp7 promotes domain V/VI compaction and stabilization of inter-domain interactions during early 60S assembly. Nature Communications 12:1.
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Fiona Fitzgerald & John L. Woolford. 2021. Encyclopedia of Biological Chemistry III. Encyclopedia of Biological Chemistry III 518 527 .
Zaheenul Islam Siddiqui. 2021. Emerging Concepts in Ribosome Structure, Biogenesis, and Function. Emerging Concepts in Ribosome Structure, Biogenesis, and Function 151 181 .
Meijuan Zou, Xiaoyu Zhang, Danli Jiang, Yihan Zhao, Ting Wu, Qiaoke Gong, Hang Su, Di Wu, Larry Moreland & Gang Li. (2020) Transcriptional Regulation of CD40 Expression by 4 Ribosomal Proteins via a Functional SNP on a Disease-Associated CD40 Locus. Genes 11:12, pages 1526.
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Ana Ramos-Sáenz, Daniel González-Álvarez, Olga Rodríguez-Galán, Alfonso Rodríguez-Gil, Sonia G. Gaspar, Eduardo Villalobo, Mercedes Dosil & Jesús de la Cruz. (2019) Pol5 is an essential ribosome biogenesis factor required for 60S ribosomal subunit maturation in Saccharomyces cerevisiae . RNA 25:11, pages 1561-1575.
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Christopher P. WalczakDara E. LetoLichao ZhangCeleste Riepe, Ryan Y. Muller, Paul A. DaRosaNicholas T. Ingolia, Joshua E. EliasRon R. Kopito. (2019) Ribosomal protein RPL26 is the principal target of UFMylation. Proceedings of the National Academy of Sciences 116:4, pages 1299-1308.
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Denise Palm, Deniz Streit, Maike Ruprecht, Stefan Simm, Christian Scharf & Enrico Schleiff. (2018) Late ribosomal protein localization in Arabidopsis thaliana differs to that in Saccharomyces cerevisiae . FEBS Open Bio 8:9, pages 1437-1444.
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Francisco Espinar-Marchena, Olga Rodríguez-Galán, José Fernández-Fernández, Jan Linnemann & Jesús de la Cruz. (2018) Ribosomal protein L14 contributes to the early assembly of 60S ribosomal subunits in Saccharomyces cerevisiae. Nucleic Acids Research 46:9, pages 4715-4732.
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Ilia Kats, Anton Khmelinskii, Marc Kschonsak, Florian Huber, Robert A. Knieß, Anna Bartosik & Michael Knop. (2018) Mapping Degradation Signals and Pathways in a Eukaryotic N-terminome. Molecular Cell 70:3, pages 488-501.e5.
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Ashwini Kumar Ray, Sarah Naiyer, Shashi Shekhar Singh, Alok Bhattacharya & Sudha Bhattacharya. (2018) Application of SHAPE reveals in vivo RNA folding under normal and growth-stressed conditions in the human parasite Entamoeba histolytica. Molecular and Biochemical Parasitology 219, pages 42-51.
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Elena Burlacu, Fredrik Lackmann, Lisbeth-Carolina Aguilar, Sergey Belikov, Rob van Nues, Christian Trahan, Ralph D. Hector, Nicholas Dominelli-Whiteley, Scott L. Cockroft, Lars Wieslander, Marlene Oeffinger & Sander Granneman. (2017) High-throughput RNA structure probing reveals critical folding events during early 60S ribosome assembly in yeast. Nature Communications 8:1.
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Salini Konikkat, Stephanie Biedka & John L. WoolfordJrJr. (2017) The assembly factor Erb1 functions in multiple remodeling events during 60S ribosomal subunit assembly in S. cerevisiae . Nucleic Acids Research, pages gkw1361.
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Salini KonikkatJohn L. Woolford,JrJr. (2017) Principles of 60S ribosomal subunit assembly emerging from recent studies in yeast. Biochemical Journal 474:2, pages 195-214.
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Stephen J. Kim & Randy Strich. (2016) Rpl22 is required for IME1 mRNA translation and meiotic induction in S. cerevisiae. Cell Division 11:1.
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Basil J. Greber. (2016) Mechanistic insight into eukaryotic 60S ribosomal subunit biogenesis by cryo-electron microscopy. RNA 22:11, pages 1643-1662.
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Antonio Fernández-Pevida, Sara Martín-Villanueva, Guillaume Murat, Thierry Lacombe, Dieter Kressler & Jesús de la Cruz. (2016) The eukaryote-specific N-terminal extension of ribosomal protein S31 contributes to the assembly and function of 40S ribosomal subunits. Nucleic Acids Research 44:16, pages 7777-7791.
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Min-Kyung Sung, Justin M. Reitsma, Michael J. Sweredoski, Sonja Hess & Raymond J. Deshaies. (2016) Ribosomal proteins produced in excess are degraded by the ubiquitin–proteasome system. Molecular Biology of the Cell 27:17, pages 2642-2652.
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Min-Kyung Sung, Tanya R Porras-Yakushi, Justin M Reitsma, Ferdinand M Huber, Michael J Sweredoski, André Hoelz, Sonja Hess & Raymond J Deshaies. (2016) A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins. eLife 5.
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Francisco J. Espinar-Marchena, José Fernández-Fernández, Olga Rodríguez-Galán, Antonio Fernández-Pevida, Reyes Babiano & Jesús de la Cruz. (2016) Role of the yeast ribosomal protein L16 in ribosome biogenesis. The FEBS Journal 283:16, pages 2968-2985.
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Ivan Kisly, Suna P. Gulay, Uno Mäeorg, Jonathan D. Dinman, Jaanus Remme & Tiina Tamm. (2016) The Functional Role of eL19 and eB12 Intersubunit Bridge in the Eukaryotic Ribosome. Journal of Molecular Biology 428:10, pages 2203-2216.
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Minshi Wang, Andrey V. Parshin, Natalia Shcherbik & Dimitri G. Pestov. (2015) Reduced expression of the mouse ribosomal protein Rpl17 alters the diversity of mature ribosomes by enhancing production of shortened 5.8S rRNA. RNA 21:7, pages 1240-1248.
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Jesús de la Cruz, Katrin Karbstein & John L. WoolfordJr.Jr.. (2015) Functions of Ribosomal Proteins in Assembly of Eukaryotic Ribosomes In Vivo. Annual Review of Biochemistry 84:1, pages 93-129.
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Anthony K. Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty & Pierre-Emmanuel Gleizes. (2015) An overview of pre-ribosomal RNA processing in eukaryotes. Wiley Interdisciplinary Reviews: RNA 6:2, pages 225-242.
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Antonio Fernández-Pevida, Dieter Kressler & Jesús de la Cruz. (2015) Processing of preribosomal RNA in Saccharomyces cerevisiae . Wiley Interdisciplinary Reviews: RNA 6:2, pages 191-209.
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Gregory R. Kardos, Mu-Shui Dai & Gavin P. Robertson. (2014) Growth inhibitory effects of large subunit ribosomal proteins in melanoma. Pigment Cell & Melanoma Research 27:5, pages 801-812.
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Jason Talkish, Gemma May, Yizhu Lin, John L. WoolfordJr.Jr. & C. Joel McManus. (2014) Mod-seq: high-throughput sequencing for chemical probing of RNA structure. RNA 20:5, pages 713-720.
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Juan J. García-Gómez, Antonio Fernández-Pevida, Simon Lebaron, Iván V. Rosado, David Tollervey, Dieter Kressler & Jesús de la Cruz. (2014) Final Pre-40S Maturation Depends on the Functional Integrity of the 60S Subunit Ribosomal Protein L3. PLoS Genetics 10:3, pages e1004205.
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Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Bertrade Mbom, Lawrence Lin & John L. WoolfordJr.Jr.. (2014) A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains. Genes & Development 28:2, pages 198-210.
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Chun Kit Kwok, Yiliang Ding, Yin Tang, Sarah M. Assmann & Philip C Bevilacqua. (2013) Determination of in vivo RNA structure in low-abundance transcripts. Nature Communications 4:1.
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Jill A. Dembowski, Madhumitha Ramesh, C. Joel McManus & John L. WoolfordJr.Jr.. (2013) Identification of the binding site of Rlp7 on assembling 60S ribosomal subunits in Saccharomyces cerevisiae . RNA 19:12, pages 1639-1647.
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John L WoolfordJr.Jr. & Susan J Baserga. (2013) Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae . Genetics 195:3, pages 643-681.
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Reyes Babiano, Gwenael Badis, Cosmin Saveanu, Abdelkader Namane, Antonia Doyen, Antonio Díaz-Quintana, Alain Jacquier, Micheline Fromont-Racine & Jesús de la Cruz. (2013) Yeast ribosomal protein L7 and its homologue Rlp7 are simultaneously present at distinct sites on pre-60S ribosomal particles. Nucleic Acids Research 41:20, pages 9461-9470.
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Jill A. Dembowski, Benjamin Kuo & John L. WoolfordJrJr. (2013) Has1 regulates consecutive maturation and processing steps for assembly of 60S ribosomal subunits. Nucleic Acids Research 41:16, pages 7889-7904.
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Olga Rodríguez-Galán, Juan José García-Gómez & Jesús de la Cruz. (2013) Yeast and human RNA helicases involved in ribosome biogenesis: Current status and perspectives. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:8, pages 775-790.
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Michael Gamalinda, Jelena Jakovljevic, Reyes Babiano, Jason Talkish, Jesús de la Cruz & John L. WoolfordJrJr. (2013) Yeast polypeptide exit tunnel ribosomal proteins L17, L35 and L37 are necessary to recruit late-assembling factors required for 27SB pre-rRNA processing. Nucleic Acids Research 41:3, pages 1965-1983.
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Basil J Greber, Daniel Boehringer, Christian Montellese & Nenad Ban. (2012) Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit. Nature Structural & Molecular Biology 19:12, pages 1228-1233.
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Antonio Fernández-Pevida, Olga Rodríguez-Galán, Antonio Díaz-Quintana, Dieter Kressler & Jesús de la Cruz. (2012) Yeast Ribosomal Protein L40 Assembles Late into Precursor 60 S Ribosomes and Is Required for Their Cytoplasmic Maturation. Journal of Biological Chemistry 287:45, pages 38390-38407.
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