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Molecular and Cellular Biology Volume 28, 2008 - Issue 21
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Article

Transcription of Multiple Yeast Ribosomal DNA Genes Requires Targeting of UAF to the Promoter by Uaf30

Robert D. Hontz1 Department of Biochemistry and Molecular Genetics
,
Sarah L. French2 Department of Microbiology, University of Virginia Health System, School of Medicine, Charlottesville, Virginia22908
,
Melanie L. Oakes3 Department of Biological Chemistry
,
Prasad Tongaonkar3 Department of Biological Chemistry;4 Department of Pathology and Laboratory of Medicine, University of California, Irvine, Irvine, California92697
,
Masayasu Nomura3 Department of Biological Chemistry
,
Ann L. Beyer2 Department of Microbiology, University of Virginia Health System, School of Medicine, Charlottesville, Virginia22908
&
Jeffrey S. Smith1 Department of Biochemistry and Molecular GeneticsCorrespondence[email protected]
 show all
Pages 6709-6719 | Received 29 Apr 2008, Accepted 22 Aug 2008, Published online: 27 Mar 2023

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Bruce A. Knutson, Marissa L. Smith, Alana E. Belkevich & Aula M. Fakhouri. (2020) Molecular Topology of RNA Polymerase I Upstream Activation Factor. Molecular and Cellular Biology 40:13.
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Benjamin Roche, Benoît Arcangioli & Rob Martienssen. (2017) New roles for Dicer in the nucleolus and its relevance to cancer. Cell Cycle 16:18, pages 1643-1653.
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Joseph M. Johnson, Sarah L. French, Yvonne N. Osheim, Mingguang Li, Lindsey Hall, Ann L. Beyer & Jeffrey S. Smith. (2013) Rpd3- and Spt16-Mediated Nucleosome Assembly and Transcriptional Regulation on Yeast Ribosomal DNA Genes. Molecular and Cellular Biology 33:14, pages 2748-2759.
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Sarah L. French, Martha L. Sikes, Robert D. Hontz, Yvonne N. Osheim, Tashima E. Lambert, Aziz El Hage, Mitchell M. Smith, David Tollervey, Jeffrey S. Smith & Ann L. Beyer. (2011) Distinguishing the Roles of Topoisomerases I and II in Relief of Transcription-Induced Torsional Stress in Yeast rRNA Genes. Molecular and Cellular Biology 31:3, pages 482-494.
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Hannah Goetze, Manuel Wittner, Stephan Hamperl, Maria Hondele, Katharina Merz, Ulrike Stoeckl & Joachim Griesenbeck. (2010) Alternative Chromatin Structures of the 35S rRNA Genes in Saccharomyces cerevisiae Provide a Molecular Basis for the Selective Recruitment of RNA Polymerases I and II. Molecular and Cellular Biology 30:8, pages 2028-2045.
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Articles from other publishers (18)

Emma Lesage, Jorge Perez-Fernandez, Sophie Queille, Christophe Dez, Olivier Gadal & Marta Kwapisz. (2021) Non-Coding, RNAPII-Dependent Transcription at the Promoters of rRNA Genes Regulates Their Chromatin State in S. cerevisiae. Non-Coding RNA 7:3, pages 41.
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Tomasz W. Turowski, Elisabeth Petfalski, Benjamin D. Goddard, Sarah L. French, Aleksandra Helwak & David Tollervey. (2020) Nascent Transcript Folding Plays a Major Role in Determining RNA Polymerase Elongation Rates. Molecular Cell 79:3, pages 488-503.e11.
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Basil J. Greber & Eva Nogales. 2019. Macromolecular Protein Complexes II: Structure and Function. Macromolecular Protein Complexes II: Structure and Function 143 192 .
Christoph EngelSimon NeyerPatrick Cramer. (2018) Distinct Mechanisms of Transcription Initiation by RNA Polymerases I and II. Annual Review of Biophysics 47:1, pages 425-446.
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Marissa L. Smith, Weidong Cui, Ashleigh J. Jackobel, Nancy Walker-Kopp & Bruce A. Knutson. (2018) Reconstitution of RNA Polymerase I Upstream Activating Factor and the Roles of Histones H3 and H4 in Complex Assembly. Journal of Molecular Biology 430:5, pages 641-654.
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Meng Wang & Bernardo Lemos. (2017) Ribosomal DNA copy number amplification and loss in human cancers is linked to tumor genetic context, nucleolus activity, and proliferation. PLOS Genetics 13:9, pages e1006994.
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Christoph Engel, Tobias Gubbey, Simon Neyer, Sarah Sainsbury, Christiane Oberthuer, Carlo Baejen, Carrie Bernecky & Patrick Cramer. (2017) Structural Basis of RNA Polymerase I Transcription Initiation. Cell 169:1, pages 120-131.e22.
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Zhongwu Zhou, Yi Yang, Stephen F. Konieczny & Joseph M.K. Irudayaraj. (2015) Rapid and unbiased extraction of chromatin associated RNAs from purified native chromatin. Journal of Chromatography A 1426, pages 64-68.
Crossref
Joseph M. Johnson, Jeffrey S. Smith & David A. Schneider. 2014. Yeast Genetics. Yeast Genetics 303 328 .
Fahmida Khatun, Yu Sasano, Minetaka Sugiyama, Yoshinobu Kaneko & Satoshi Harashima. (2013) Increase in rRNA content in a Saccharomyces cerevisiae suppressor strain from rrn10 disruptant by rDNA cluster duplication. Applied Microbiology and Biotechnology 97:20, pages 9011-9019.
Crossref
Stephan Hamperl, Manuel Wittner, Virginia Babl, Jorge Perez-Fernandez, Herbert Tschochner & Joachim Griesenbeck. (2013) Chromatin states at ribosomal DNA loci. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:3-4, pages 405-417.
Crossref
Hongfeng Chen, Meiyun Fan, Lawrence M. Pfeffer & R. Nicholas Laribee. (2012) The histone H3 lysine 56 acetylation pathway is regulated by target of rapamycin (TOR) signaling and functions directly in ribosomal RNA biogenesis. Nucleic Acids Research 40:14, pages 6534-6546.
Crossref
Varesa Chuwattanakul, Minetaka Sugiyama, Fahmida Khatun, Kenta Kurata, Isao Tomita, Yoshinobu Kaneko & Satoshi Harashima. (2012) Increased transcription of NOP15, involved in ribosome biogenesis in Saccharomyces cerevisiae, enhances the production yield of RNA as a source of nucleotide seasoning. Journal of Bioscience and Bioengineering 114:1, pages 17-22.
Crossref
David Alan Schneider. (2012) RNA polymerase I activity is regulated at multiple steps in the transcription cycle: Recent insights into factors that influence transcription elongation. Gene 493:2, pages 176-184.
Crossref
Kara A. Bernstein, Robert J.D. Reid, Ivana Sunjevaric, Kimberly Demuth, Rebecca C. Burgess & Rodney Rothstein. (2011) The Shu complex, which contains Rad51 paralogues, promotes DNA repair through inhibition of the Srs2 anti-recombinase. Molecular Biology of the Cell 22:9, pages 1599-1607.
Crossref
Elisa Cesarini, Francesca Romana Mariotti, Francesco Cioci & Giorgio Camilloni. (2010) RNA Polymerase I Transcription Silences Noncoding RNAs at the Ribosomal DNA Locus in Saccharomyces cerevisiae. Eukaryotic Cell 9:2, pages 325-335.
Crossref
Robert D Hontz, Rachel O Niederer, Joseph M Johnson & Jeffrey S Smith. (2009) Genetic Identification of Factors That Modulate Ribosomal DNA Transcription in Saccharomyces cerevisiae . Genetics 182:1, pages 105-119.
Crossref
. (2009) Current awareness on yeast. Yeast 26:4, pages 249-260.
Crossref

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