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Molecular and Cellular Biology Volume 31, 2011 - Issue 7
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Article

Identification of Distal cis-Regulatory Elements at Mouse Mitoferrin Loci Using Zebrafish Transgenesis

Julio D. Amigo1 Department of Medicine, Division of Hematology, Brigham and Women's Hospital, and Harvard Medical School, Boston, Massachusetts02115
,
Ming Yu2 Department of Medicine, Division of Hematology-Oncology, Children's Hospital Boston, and Harvard Medical School, Boston, Massachusetts02115
,
Marie-Berengere Troadec3 Department of Pathology, University of Utah School of Medicine, Salt Lake City, Utah84132
,
Babette Gwynn4 Jackson Laboratory, Bar Harbor, Maine04609
,
Jeffrey D. Cooney1 Department of Medicine, Division of Hematology, Brigham and Women's Hospital, and Harvard Medical School, Boston, Massachusetts02115
,
Amy J. Lambert4 Jackson Laboratory, Bar Harbor, Maine04609
,
Neil C. Chi5 Department of Medicine, Division of Cardiology, University of California, San Diego, School of Medicine, La Jolla, California92093
,
Mitchell J. Weiss6 Division of Hematology, Children's Hospital of Philadelphia, and University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania19104
,
Luanne L. Peters4 Jackson Laboratory, Bar Harbor, Maine04609
,
Jerry Kaplan3 Department of Pathology, University of Utah School of Medicine, Salt Lake City, Utah84132
,
Alan B. Cantor2 Department of Medicine, Division of Hematology-Oncology, Children's Hospital Boston, and Harvard Medical School, Boston, Massachusetts02115
&
Barry H. Paw1 Department of Medicine, Division of Hematology, Brigham and Women's Hospital, and Harvard Medical School, Boston, Massachusetts02115;2 Department of Medicine, Division of Hematology-Oncology, Children's Hospital Boston, and Harvard Medical School, Boston, Massachusetts02115Correspondence[email protected]
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Pages 1344-1356 | Received 29 Aug 2010, Accepted 06 Jan 2011, Published online: 20 Mar 2023

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Bibbin T. Paul, David H. Manz, Frank M. Torti & Suzy V. Torti. (2017) Mitochondria and Iron: current questions. Expert Review of Hematology 10:1, pages 65-79.
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Articles from other publishers (29)

Md Yousuf Ali, Claudia R. Oliva, Susanne Flor & Corinne E. Griguer. (2022) Mitoferrin, Cellular and Mitochondrial Iron Homeostasis. Cells 11:21, pages 3464.
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Yvette Y. Yien & Mark Perfetto. (2022) Regulation of Heme Synthesis by Mitochondrial Homeostasis Proteins. Frontiers in Cell and Developmental Biology 10.
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Dongchen Wang, Peng Ye, Chaohua Kong, Yuelin Chao, Wande Yu, Xiaomin Jiang, Jie Luo, Yue Gu & Shao-Liang Chen. (2021) Mitoferrin 2 deficiency prevents mitochondrial iron overload-induced endothelial injury and alleviates atherosclerosis. Experimental Cell Research 402:1, pages 112552.
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Yang Yang & Xiangshan Xu. (2021) Identification of key genes in coronary artery disease: an integrative approach based on weighted gene co-expression network analysis and their correlation with immune infiltration. Aging 13:6, pages 8306-8319.
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Chanita Sanyear, Punnee Butthep, Wiraya Eamsaard, Suthat Fucharoen, Saovaros Svasti & Patarabutr Masaratana. (2020) Iron homeostasis in a mouse model of thalassemia intermedia is altered between adolescence and adulthood. PeerJ 8, pages e8802.
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Oluwaseun B. Ogunbona & Steven M. Claypool. (2019) Emerging Roles in the Biogenesis of Cytochrome c Oxidase for Members of the Mitochondrial Carrier Family. Frontiers in Cell and Developmental Biology 7.
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Yvette Y. Yien, Jiahai Shi, Caiyong Chen, Jesmine T.M. Cheung, Anthony S. Grillo, Rishna Shrestha, Liangtao Li, Xuedi Zhang, Martin D. Kafina, Paul D. Kingsley, Matthew J. King, Julien Ablain, Hojun Li, Leonard I. Zon, James Palis, Martin D. Burke, Daniel E. Bauer, Stuart H. Orkin, Carla M. Koehler, John D. Phillips, Jerry Kaplan, Diane M. Ward, Harvey F. Lodish & Barry H. Paw. (2018) FAM210B is an erythropoietin target and regulates erythroid heme synthesis by controlling mitochondrial iron import and ferrochelatase activity. Journal of Biological Chemistry 293:51, pages 19797-19811.
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Jacky Chung, Johannes G Wittig, Alireza Ghamari, Manami Maeda, Tamara A Dailey, Hector Bergonia, Martin D Kafina, Emma E Coughlin, Catherine E Minogue, Alexander S Hebert, Liangtao Li, Jerry Kaplan, Harvey F Lodish, Daniel E Bauer, Stuart H Orkin, Alan B Cantor, Takahiro Maeda, John D Phillips, Joshua J Coon, David J Pagliarini, Harry A Dailey & Barry H Paw. (2017) Erythropoietin signaling regulates heme biosynthesis. eLife 6.
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Anna-Liisa Nieminen, Hsin-I Hung & John J. Lemasters. 2017. Imaging in Photodynamic Therapy. Imaging in Photodynamic Therapy 117 130 .
Martin D. Kafina & Barry H. Paw. (2017) Intracellular iron and heme trafficking and metabolism in developing erythroblasts. Metallomics 9:9, pages 1193-1203.
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Chris A. Brackley, Jill M. Brown, Dominic Waithe, Christian Babbs, James Davies, Jim R. Hughes, Veronica J. Buckle & Davide Marenduzzo. (2016) Predicting the three-dimensional folding of cis-regulatory regions in mammalian genomes using bioinformatic data and polymer models. Genome Biology 17:1.
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Tracey A Rouault. (2016) Mitochondrial iron overload: causes and consequences. Current Opinion in Genetics & Development 38, pages 31-37.
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Yvette Y. YienBarry H. Paw. (2016) A role for iron deficiency in dopaminergic neurodegeneration. Proceedings of the National Academy of Sciences 113:13, pages 3417-3418.
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Jialiang Huang, Xin Liu, Dan Li, Zhen Shao, Hui Cao, Yuannyu Zhang, Eirini Trompouki, Teresa V. Bowman, Leonard I. Zon, Guo-Cheng Yuan, Stuart H. Orkin & Jian Xu. (2016) Dynamic Control of Enhancer Repertoires Drives Lineage and Stage-Specific Transcription during Hematopoiesis. Developmental Cell 36:1, pages 9-23.
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Ulrich Mühlenhoff, Bastian Hoffmann, Nadine Richter, Nicole Rietzschel, Farah Spantgar, Oliver Stehling, Marta A. Uzarska & Roland Lill. (2015) Compartmentalization of iron between mitochondria and the cytosol and its regulation. European Journal of Cell Biology 94:7-9, pages 292-308.
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Nikolaus Bresgen & Peter Eckl. (2015) Oxidative Stress and the Homeodynamics of Iron Metabolism. Biomolecules 5:2, pages 808-847.
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Yvette Y. Yien, Raymond F. Robledo, Iman J. Schultz, Naoko Takahashi-Makise, Babette Gwynn, Daniel E. Bauer, Abhishek Dass, Gloria Yi, Liangtao Li, Gordon J. Hildick-Smith, Jeffrey D. Cooney, Eric L. Pierce, Kyla Mohler, Tamara A. Dailey, Non Miyata, Paul D. Kingsley, Caterina Garone, Shilpa M. Hattangadi, Hui Huang, Wen Chen, Ellen M. Keenan, Dhvanit I. Shah, Thorsten M. Schlaeger, Salvatore DiMauro, Stuart H. Orkin, Alan B. Cantor, James Palis, Carla M. Koehler, Harvey F. Lodish, Jerry Kaplan, Diane M. Ward, Harry A. Dailey, John D. Phillips, Luanne L. Peters & Barry H. Paw. (2014) TMEM14C is required for erythroid mitochondrial heme metabolism. Journal of Clinical Investigation 124:10, pages 4294-4304.
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Lu Zhao, Zhidan Xia & Fudi Wang. (2014) Zebrafish in the sea of mineral (iron, zinc, and copper) metabolism. Frontiers in Pharmacology 5.
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Jacky Chung, Sheila A. Anderson, Babette Gwynn, Kathryn M. Deck, Michael J. Chen, Nathaniel B. Langer, George C. Shaw, Nicholas C. Huston, Leah F. Boyer, Sumon Datta, Prasad N. Paradkar, Liangtao Li, Zong Wei, Amy J. Lambert, Kenneth Sahr, Johannes G. Wittig, Wen Chen, Wange Lu, Bruno Galy, Thorsten M. Schlaeger, Matthias W. Hentze, Diane M. Ward, Jerry Kaplan, Richard S. Eisenstein, Luanne L. Peters & Barry H. Paw. (2014) Iron Regulatory Protein-1 Protects against Mitoferrin-1-deficient Porphyria. Journal of Biological Chemistry 289:11, pages 7835-7843.
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Jim R Hughes, Nigel Roberts, Simon McGowan, Deborah Hay, Eleni Giannoulatou, Magnus Lynch, Marco De Gobbi, Stephen Taylor, Richard Gibbons & Douglas R Higgs. (2014) Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experiment. Nature Genetics 46:2, pages 205-212.
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Gordon J. Hildick-Smith, Jeffrey D. Cooney, Caterina Garone, Laura S. Kremer, Tobias B. Haack, Jonathan N. Thon, Non Miyata, Daniel S. Lieber, Sarah E. Calvo, H. Orhan Akman, Yvette Y. Yien, Nicholas C. Huston, Diana S. Branco, Dhvanit I. Shah, Matthew L. Freedman, Carla M. Koehler, Joseph E. ItalianoJr.Jr., Andreas Merkenschlager, Skadi Beblo, Tim M. Strom, Thomas Meitinger, Peter Freisinger, M. Alice Donati, Holger Prokisch, Vamsi K. Mootha, Salvatore DiMauro & Barry H. Paw. (2013) Macrocytic Anemia and Mitochondriopathy Resulting from a Defect in Sideroflexin 4. The American Journal of Human Genetics 93:5, pages 906-914.
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Marina BayevaArineh KhechaduriRongxue WuMichael A. BurkeJ. Andrew WasserstromNeha SinghMarc LiesaOrian S. ShirihaiNathaniel B. LangerBarry H. PawHossein Ardehali. (2013) ATP-Binding Cassette B10 Regulates Early Steps of Heme Synthesis. Circulation Research 113:3, pages 279-287.
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LiQi LiJohannes FreudenbergKairong Cui, Ryan Dale, Sang-Hyun Song, Ann Dean, Keji Zhao, Raja JothiPaul E. Love. (2013) Ldb1-nucleated transcription complexes function as primary mediators of global erythroid gene activation. Blood 121:22, pages 4575-4585.
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Caiyong Chen, Daniel Garcia-Santos, Yuichi Ishikawa, Alexandra Seguin, Liangtao Li, Katherine H. Fegan, Gordon J. Hildick-Smith, Dhvanit I. Shah, Jeffrey D. Cooney, Wen Chen, Matthew J. King, Yvette Y. Yien, Iman J. Schultz, Heidi Anderson, Arthur J. Dalton, Matthew L. Freedman, Paul D. Kingsley, James Palis, Shilpa M. Hattangadi, Harvey F. Lodish, Diane M. Ward, Jerry Kaplan, Takahiro Maeda, Prem Ponka & Barry H. Paw. (2013) Snx3 Regulates Recycling of the Transferrin Receptor and Iron Assimilation. Cell Metabolism 17:3, pages 343-352.
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Hsin-I Hung, Justin M. Schwartz, Eduardo N. Maldonado, John J. Lemasters & Anna-Liisa Nieminen. (2013) Mitoferrin-2-dependent Mitochondrial Iron Uptake Sensitizes Human Head and Neck Squamous Carcinoma Cells to Photodynamic Therapy. Journal of Biological Chemistry 288:1, pages 677-686.
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Jeffrey D. Cooney, Gordon J. Hildick-Smith, Ebrahim Shafizadeh, Paul F. McBride, Kelli J. Carroll, Heidi Anderson, George C. Shaw, Owen J. Tamplin, Diana S. Branco, Arthur J. Dalton, Dhvanit I. Shah, Clara Wong, Patrick G. Gallagher, Leonard I. Zon, Trista E. North & Barry H. Paw. (2013) Teleost growth factor independence (gfi) genes differentially regulate successive waves of hematopoiesis. Developmental Biology 373:2, pages 431-441.
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Caiyong Chen & Barry H. Paw. (2012) Cellular and mitochondrial iron homeostasis in vertebrates. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1823:9, pages 1459-1467.
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Jacky Chung, Caiyong Chen & Barry H. Paw. (2012) Heme metabolism and erythropoiesis. Current Opinion in Hematology 19:3, pages 156-162.
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Yvette Y. Yien & Barry H. Paw. 2012. Encyclopedia of Inorganic and Bioinorganic Chemistry. Encyclopedia of Inorganic and Bioinorganic Chemistry 1 17 .

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