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Molecular and Cellular Biology Volume 27, 2007 - Issue 8
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Article

Dependency of ISW1a Chromatin Remodeling on Extranucleosomal DNA

Vamsi K. GangarajuDepartment of Biochemistry and Molecular Biology, Southern Illinois University School of Medicine, Carbondale, Illinois62901-4413
&
Blaine BartholomewDepartment of Biochemistry and Molecular Biology, Southern Illinois University School of Medicine, Carbondale, Illinois62901-4413Correspondence[email protected]
Pages 3217-3225 | Received 13 Sep 2006, Accepted 18 Jan 2007, Published online: 27 Mar 2023

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Kevin M. Creamer, Godwin Job, Sreenath Shanker, Geoffrey A. Neale, Yuan-chi Lin, Blaine Bartholomew & Janet F. Partridge. (2014) The Mi-2 Homolog Mit1 Actively Positions Nucleosomes within Heterochromatin To Suppress Transcription. Molecular and Cellular Biology 34:11, pages 2046-2061.
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Wladyslaw A. Krajewski. (2014) Isw1a does not have strict limitations on the length of extranucleosomal DNAs for mobilization of nucleosomes assembled with HeLa cell histones. Journal of Biomolecular Structure and Dynamics 32:4, pages 523-531.
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Maheshi Udugama, Abdellah Sabri & Blaine Bartholomew. (2011) The INO80 ATP-Dependent Chromatin Remodeling Complex Is a Nucleosome Spacing Factor. Molecular and Cellular Biology 31:4, pages 662-673.
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Marina Pinskaya, Anitha Nair, David Clynes, Antonin Morillon & Jane Mellor. (2009) Nucleosome Remodeling and Transcriptional Repression Are Distinct Functions of Isw1 in Saccharomyces cerevisiae. Molecular and Cellular Biology 29:9, pages 2419-2430.
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Articles from other publishers (39)

Alexis A. Reyes, Ryan D. Marcum & Yuan He. (2021) Structure and Function of Chromatin Remodelers. Journal of Molecular Biology 433:14, pages 166929.
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Elisa Oberbeckmann, Vanessa Niebauer, Shinya Watanabe, Lucas Farnung, Manuela Moldt, Andrea Schmid, Patrick Cramer, Craig L. Peterson, Sebastian Eustermann, Karl-Peter Hopfner & Philipp Korber. (2021) Ruler elements in chromatin remodelers set nucleosome array spacing and phasing. Nature Communications 12:1.
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Peter R. Eriksson & David J. Clark. (2021) The yeast ISW1b ATP-dependent chromatin remodeler is critical for nucleosome spacing and dinucleosome resolution. Scientific Reports 11:1.
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Saurabh K. Bhardwaj, Solomon G. Hailu, Lola Olufemi, Sandipan Brahma, Soumyadipta Kundu, Swetansu K. Hota, Jim Persinger & Blaine Bartholomew. (2020) Dinucleosome specificity and allosteric switch of the ISW1a ATP-dependent chromatin remodeler in transcription regulation. Nature Communications 11:1.
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Drake A. Donovan, Johnathan G. Crandall, Orion G.B. Banks, Zena D. Jensvold, Vi Truong, Devin Dinwiddie, Laura E. McKnight & Jeffrey N. McKnight. (2019) Engineered Chromatin Remodeling Proteins for Precise Nucleosome Positioning. Cell Reports 29:8, pages 2520-2535.e4.
Crossref
Sebastian Eustermann, Kevin Schall, Dirk Kostrewa, Kristina Lakomek, Mike Strauss, Manuela Moldt & Karl-Peter Hopfner. (2018) Structural basis for ATP-dependent chromatin remodelling by the INO80 complex. Nature 556:7701, pages 386-390.
Crossref
Benjamin J. Manning & Timur Yusufzai. (2017) The ATP-dependent chromatin remodeling enzymes CHD6, CHD7, and CHD8 exhibit distinct nucleosome binding and remodeling activities. Journal of Biological Chemistry 292:28, pages 11927-11936.
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Oliver Willhoft, Elizabeth A McCormack, Ricardo J Aramayo, Rohan Bythell-Douglas, Lorraine Ocloo, Xiaodong Zhang & Dale B Wigley. (2017) Crosstalk within a functional INO80 complex dimer regulates nucleosome sliding. eLife 6.
Crossref
M. Lezzerini & C.G. Riedel. 2017. Chromatin Regulation and Dynamics. Chromatin Regulation and Dynamics 95 116 .
Nils Krietenstein, Megha Wal, Shinya Watanabe, Bongsoo Park, Craig L. Peterson, B. Franklin Pugh & Philipp Korber. (2016) Genomic Nucleosome Organization Reconstituted with Pure Proteins. Cell 167:3, pages 709-721.e12.
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Ming Li, Arjan Hada, Payel Sen, Lola Olufemi, Michael A Hall, Benjamin Y Smith, Scott Forth, Jeffrey N McKnight, Ashok Patel, Gregory D Bowman, Blaine Bartholomew & Michelle D Wang. (2015) Dynamic regulation of transcription factors by nucleosome remodeling. eLife 4.
Crossref
Timothy J Parnell, Alisha Schlichter, Boris G Wilson & Bradley R Cairns. (2015) The chromatin remodelers RSC and ISW1 display functional and chromatin-based promoter antagonism. eLife 4.
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Tamara Y. Erkina & Alexandre Erkine. (2014) ASF1 and the SWI/SNF complex interact functionally during nucleosome displacement, while FACT is required for nucleosome reassembly at yeast heat shock gene promoters during sustained stress. Cell Stress and Chaperones 20:2, pages 355-369.
Crossref
Blaine Bartholomew. (2014) Regulating the Chromatin Landscape: Structural and Mechanistic Perspectives. Annual Review of Biochemistry 83:1, pages 671-696.
Crossref
Wladyslaw A. Krajewski. (2014) Yeast Isw1a and Isw1b exhibit similar nucleosome mobilization capacities for mononucleosomes, but differently mobilize dinucleosome templates. Archives of Biochemistry and Biophysics 546, pages 72-80.
Crossref
Mahadevan Lakshminarasimhan & Michael P. Washburn. 2014. Systems Analysis of Chromatin-Related Protein Complexes in Cancer. Systems Analysis of Chromatin-Related Protein Complexes in Cancer 177 196 .
Emily Petty & Lorraine Pillus. (2013) Balancing chromatin remodeling and histone modifications in transcription. Trends in Genetics 29:11, pages 621-629.
Crossref
Wladyslaw A. Krajewski. (2013) Comparison of the Isw1a, Isw1b, and Isw2 Nucleosome Disrupting Activities. Biochemistry 52:40, pages 6940-6949.
Crossref
Felix Mueller-Planitz, Henrike Klinker & Peter B Becker. (2013) Nucleosome sliding mechanisms: new twists in a looped history. Nature Structural & Molecular Biology 20:9, pages 1026-1032.
Crossref
Gabriel E Zentner, Toshio Tsukiyama & Steven Henikoff. (2013) ISWI and CHD chromatin remodelers bind to promoters but act in gene bodies. Epigenetics & Chromatin 6:S1.
Crossref
Gabriel E. Zentner, Toshio Tsukiyama & Steven Henikoff. (2013) ISWI and CHD Chromatin Remodelers Bind Promoters but Act in Gene Bodies. PLoS Genetics 9:2, pages e1003317.
Crossref
Benjamin J. Manning & Craig L. Peterson. (2013) Releasing the brakes on a chromatin-remodeling enzyme. Nature Structural & Molecular Biology 20:1, pages 5-7.
Crossref
Felix Mueller-Planitz, Henrike Klinker, Johanna Ludwigsen & Peter B Becker. (2012) The ATPase domain of ISWI is an autonomous nucleosome remodeling machine. Nature Structural & Molecular Biology 20:1, pages 82-89.
Crossref
Jaya Yodh. 2013. DNA Helicases and DNA Motor Proteins. DNA Helicases and DNA Motor Proteins 263 295 .
Karim Bouazoune & Robert E. Kingston. (2012) Chromatin remodeling by the CHD7 protein is impaired by mutations that cause human developmental disorders. Proceedings of the National Academy of Sciences 109:47, pages 19238-19243.
Crossref
Ji Woong HanYoung-sup Yoon. (2012) Epigenetic Landscape of Pluripotent Stem Cells. Antioxidants & Redox Signaling 17:2, pages 205-223.
Crossref
Kuangyu Yen, Vinesh Vinayachandran, Kiran Batta, R. Thomas Koerber & B. Franklin Pugh. (2012) Genome-wide Nucleosome Specificity and Directionality of Chromatin Remodelers. Cell 149:7, pages 1461-1473.
Crossref
Timothy J. Richmond. (2012) Nucleosome recognition and spacing by chromatin remodelling factor ISW1a. Biochemical Society Transactions 40:2, pages 347-350.
Crossref
Anne De Cian, Elise Praly, Fangyuan Ding, Vijender Singh, Christophe Lavelle, Eric Le Cam, Vincent Croquette, Olivier Piétrement & David Bensimon. (2012) ATP-Independent Cooperative Binding of Yeast Isw1a to Bare and Nucleosomal DNA. PLoS ONE 7:2, pages e31845.
Crossref
Jessica L Killian, Ming Li, Maxim Y Sheinin & Michelle D Wang. (2012) Recent advances in single molecule studies of nucleosomes. Current Opinion in Structural Biology 22:1, pages 80-87.
Crossref
Swetansu K. Hota, Mekonnen Lemma Dechassa, Punit Prasad & Blaine Bartholomew. 2012. Transcriptional Regulation. Transcriptional Regulation 381 409 .
Swetansu K. Hota & Blaine Bartholomew. (2011) Diversity of operation in ATP-dependent chromatin remodelers. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1809:9, pages 476-487.
Crossref
Kazuhiro Yamada, Timothy D. Frouws, Brigitte Angst, Daniel J. Fitzgerald, Carl DeLuca, Kyoko Schimmele, David F. Sargent & Timothy J. Richmond. (2011) Structure and mechanism of the chromatin remodelling factor ISW1a. Nature 472:7344, pages 448-453.
Crossref
Diana C Hargreaves & Gerald R Crabtree. (2011) ATP-dependent chromatin remodeling: genetics, genomics and mechanisms. Cell Research 21:3, pages 396-420.
Crossref
T. Y. Erkina, Y. Zou, S. Freeling, V. I. Vorobyev & A. M. Erkine. (2010) Functional interplay between chromatin remodeling complexes RSC, SWI/SNF and ISWI in regulation of yeast heat shock genes. Nucleic Acids Research 38:5, pages 1441-1449.
Crossref
Vladimir B. Teif & Karsten Rippe. (2009) Predicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activities. Nucleic Acids Research 37:17, pages 5641-5655.
Crossref
Gavin R. Schnitzler. (2008) Control of Nucleosome Positions by DNA Sequence and Remodeling Machines. Cell Biochemistry and Biophysics 51:2-3, pages 67-80.
Crossref
Verena K Maier, Mariacristina Chioda, Daniela Rhodes & Peter B Becker. (2007) ACF catalyses chromatosome movements in chromatin fibres. The EMBO Journal 27:6, pages 817-826.
Crossref
Bradley R Cairns. (2007) Chromatin remodeling: insights and intrigue from single-molecule studies. Nature Structural & Molecular Biology 14:11, pages 989-996.
Crossref

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