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Gene Expression

MOT1 Can Activate Basal Transcription In Vitro by Regulating the Distribution of TATA Binding Protein between Promoter and Nonpromoter Sites

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Pages 2835-2845 | Received 10 Dec 1998, Accepted 13 Jan 1999, Published online: 28 Mar 2023

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Read on this site (8)

Bryan J. Venters, Jordan D. Irvin, Paul Gramlich & B. Franklin Pugh. (2011) Genome-Wide Transcriptional Dependence on Conserved Regions of Mot1. Molecular and Cellular Biology 31:11, pages 2253-2261.
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Bryan J. Venters & B. Franklin Pugh. (2009) How eukaryotic genes are transcribed. Critical Reviews in Biochemistry and Molecular Biology 44:2-3, pages 117-141.
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Arindam Dasgupta, Rebekka O. Sprouse, Sarah French, Pavel Aprikian, Robert Hontz, Sarah A. Juedes, Jeffrey S. Smith, Ann L. Beyer & David T. Auble. (2007) Regulation of rRNA Synthesis by TATA-Binding Protein-Associated Factor Mot1. Molecular and Cellular Biology 27:8, pages 2886-2896.
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Mary C. Thomas & Cheng-Ming Chiang. (2006) The General Transcription Machinery and General Cofactors. Critical Reviews in Biochemistry and Molecular Biology 41:3, pages 105-178.
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Marcin P. Klejman, Lloyd A. Pereira, Hester J. T. van Zeeburg, Siv Gilfillan, Michael Meisterernst & H. T. Marc Timmers. (2004) NC2α Interacts with BTAF1 and Stimulates Its ATP-Dependent Association with TATA-Binding Protein. Molecular and Cellular Biology 24:22, pages 10072-10082.
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Haiping Kou, Jordan D. Irvin, Kathryn L. Huisinga, Madhusmita Mitra & B. Franklin Pugh. (2003) Structural and Functional Analysis of Mutations along the Crystallographic Dimer Interface of the Yeast TATA Binding Protein. Molecular and Cellular Biology 23:9, pages 3186-3201.
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Joseph V. Geisberg, Zarmik Moqtaderi, Laurent Kuras & Kevin Struhl. (2002) Mot1 Associates with Transcriptionally Active Promoters and Inhibits Association of NC2 in Saccharomyces cerevisiae. Molecular and Cellular Biology 22:23, pages 8122-8134.
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Lloyd A. Pereira, Jan A. van der Knaap, Vincent van den Boom, Fiona A. J. van den Heuvel & H. T. Marc Timmers. (2001) TAFII170 Interacts with the Concave Surface of TATA-Binding Protein To Inhibit Its DNA Binding Activity. Molecular and Cellular Biology 21:21, pages 7523-7534.
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Moustafa M. Saleh, Célia Jeronimo, François Robert & Gabriel E. Zentner. (2021) Connection of core and tail Mediator modules restrains transcription from TFIID-dependent promoters. PLOS Genetics 17:8, pages e1009529.
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Gilles Flouriot, Charly Jehanno, Yann Le Page, Pascale Le Goff, Benjamin Boutin & Denis Michel. (2020) The Basal Level of Gene Expression Associated with Chromatin Loosening Shapes Waddington Landscapes and Controls Cell Differentiation. Journal of Molecular Biology 432:7, pages 2253-2270.
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Jason D. True, Joseph J. Muldoon, Melissa N. Carver, Kunal Poorey, Savera J. Shetty, Stefan Bekiranov & David T. Auble. (2016) The Modifier of Transcription 1 (Mot1) ATPase and Spt16 Histone Chaperone Co-regulate Transcription through Preinitiation Complex Assembly and Nucleosome Organization. Journal of Biological Chemistry 291:29, pages 15307-15319.
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Kunal PooreyRamya ViswanathanMelissa N. CarverTatiana S. KarpovaShana M. CirimotichJames G. McNallyStefan BekiranovDavid T. Auble. (2013) Measuring Chromatin Interaction Dynamics on the Second Time Scale at Single-Copy Genes. Science 342:6156, pages 369-372.
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Mohamed-Amin Choukrallah, Dominique Kobi, Igor Martianov, W. W. M. Pim Pijnappel, Nikolai Mischerikow, Tao Ye, Albert J. R. Heck, H. Th. Marc Timmers & Irwin Davidson. (2012) Interconversion between active and inactive TATA-binding protein transcription complexes in the mouse genome. Nucleic Acids Research 40:4, pages 1446-1459.
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Maria E. Faricelli, Miroslav Valárik & Jorge Dubcovsky. (2009) Control of flowering time and spike development in cereals: the earliness per se Eps-1 region in wheat, rice, and Brachypodium. Functional & Integrative Genomics 10:2, pages 293-306.
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Denis Michel. (2010) How transcription factors can adjust the gene expression floodgates. Progress in Biophysics and Molecular Biology 102:1, pages 16-37.
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Hidehisa Takahashi, Skylar Martin-Brown, Michael P. Washburn, Laurence Florens, Joan W. Conaway & Ronald C. Conaway. (2009) Proteomics Reveals a Physical and Functional Link between Hepatocyte Nuclear Factor 4α and Transcription Factor IID. Journal of Biological Chemistry 284:47, pages 32405-32412.
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Denis Michel. (2009) Fine tuning gene expression through short DNA-protein binding cycles. Biochimie 91:7, pages 933-941.
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Hiroaki Tamaki, Mineko Konishi, Yasufumi Daimon, Mitsuhiro Aida, Masao Tasaka & Munetaka Sugiyama. (2009) Identification of novel meristem factors involved in shoot regeneration through the analysis of temperature-sensitive mutants of Arabidopsis. The Plant Journal 57:6, pages 1027-1039.
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Rebekka O. Sprouse, Melissa N. Wells & David T. Auble. (2009) TATA-binding Protein Variants That Bypass the Requirement for Mot1 in Vivo. Journal of Biological Chemistry 284:7, pages 4525-4535.
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Diana R. Arnett, Jennifer L. Jennings, David L. Tabb, Andrew J. Link & P. Anthony Weil. (2008) A Proteomics Analysis of Yeast Mot1p Protein-Protein Associations. Molecular & Cellular Proteomics 7:11, pages 2090-2106.
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Folkert J. van Werven, Harm van Bakel, Hetty A.A.M. van Teeffelen, A.F. Maarten Altelaar, Marian Groot Koerkamp, Albert J.R. Heck, Frank C.P. Holstege & H.Th. Marc Timmers. (2008) Cooperative action of NC2 and Mot1p to regulate TATA-binding protein function across the genome. Genes & Development 22:17, pages 2359-2369.
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Yousry Y. Azmy, Anshuman Gupta & B. Franklin Pugh. (2008) Computational Modelling of Genome-Side Transcription Assembly Networks Using a Fluidics Analogy. PLoS ONE 3:8, pages e3095.
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Valentina Voronkova, Nataly Kacherovsky, Christine Tachibana, Diana Yu & Elton T Young. (2006) Snf1-Dependent and Snf1-Independent Pathways of Constitutive ADH2 Expression in Saccharomyces cerevisiae . Genetics 172:4, pages 2123-2138.
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Andrew A. Horwitz, Satish Sankaran & Jeffrey D. Parvin. (2006) Direct Stimulation of Transcription Initiation by BRCA1 Requires Both Its Amino and Carboxyl Termini. Journal of Biological Chemistry 281:13, pages 8317-8320.
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Mary C. Thomas & Cheng-Ming Chiang. 2006. Gene Expression and Regulation. Gene Expression and Regulation 67 94 .
Yoshimasa Yagi & Y Tony Ip. (2005) Helicase89B is a Mot1p/BTAF1 homologue that mediates an antimicrobial response in Drosophila . EMBO reports 6:11, pages 1088-1094.
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Lloyd A. Pereira, Marcin P. Klejman, Christine Ruhlmann, François Kavelaars, Mustapha Oulad-Abdelghani, H. Th. Marc Timmers & Patrick Schultz. (2004) Molecular Architecture of the Basal Transcription Factor B-TFIID. Journal of Biological Chemistry 279:21, pages 21802-21807.
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Joseph V Geisberg & Kevin Struhl. (2004) Cellular Stress Alters the Transcriptional Properties of Promoter-Bound Mot1-TBP Complexes. Molecular Cell 14:4, pages 479-489.
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Katherine A. Borkovich, Lisa A. Alex, Oded Yarden, Michael Freitag, Gloria E. Turner, Nick D. Read, Stephan Seiler, Deborah Bell-Pedersen, John Paietta, Nora Plesofsky, Michael Plamann, Marta Goodrich-Tanrikulu, Ulrich Schulte, Gertrud Mannhaupt, Frank E. Nargang, Alan Radford, Claude Selitrennikoff, James E. Galagan, Jay C. Dunlap, Jennifer J. Loros, David Catcheside, Hirokazu Inoue, Rodolfo Aramayo, Michael Polymenis, Eric U. Selker, Matthew S. Sachs, George A. Marzluf, Ian Paulsen, Rowland Davis, Daniel J. Ebbole, Alex Zelter, Eric R. Kalkman, Rebecca O'Rourke, Frederick Bowring, Jane Yeadon, Chizu Ishii, Keiichiro Suzuki, Wataru Sakai & Robert Pratt. (2004) Lessons from the Genome Sequence of Neurospora crassa : Tracing the Path from Genomic Blueprint to Multicellular Organism . Microbiology and Molecular Biology Reviews 68:1, pages 1-108.
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Oranart Matangkasombut, Roy Auty & Stephen Buratowski. 2004. Proteins in Eukaryotic Transcription. Proteins in Eukaryotic Transcription 67 92 .
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Jean-Luc Moreau, Melanie Lee, Nyasha Mahachi, Jay Vary, Jane Mellor, Toshio Tsukiyama & Colin R Goding. (2003) Regulated Displacement of TBP from the PHO8 Promoter In Vivo Requires Cbf1 and the Isw1 Chromatin Remodeling Complex. Molecular Cell 11:6, pages 1609-1620.
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Francisco Estruch & Charles N. Cole. (2003) An Early Function during Transcription for the Yeast mRNA Export Factor Dbp5p/Rat8p Suggested by Its Genetic and Physical Interactions with Transcription Factor IIH Components. Molecular Biology of the Cell 14:4, pages 1664-1676.
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Jean-Christophe Andrau, Chris J.C. Van Oevelen, Hetty A.A.M. Van Teeffelen, P.Anthony Weil, Frank C.P. Holstege & H.Th.Marc Timmers. (2002) Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation. The EMBO Journal 21:19, pages 5173-5183.
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Arindam Dasgupta, Russell P. Darst, Karla J. Martin, Cynthia A. Afshari & David T. Auble. (2002) Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms. Proceedings of the National Academy of Sciences 99:5, pages 2666-2671.
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Jennifer J. Stewart & Laurie A. Stargell. (2001) The Stability of the TFIIA-TBP-DNA Complex Is Dependent on the Sequence of the TATAAA Element. Journal of Biological Chemistry 276:32, pages 30078-30084.
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Kentaro Kayukawa, Yoko Kitajima & Taka-aki Tamura. (2001) TBP-interacting protein TIP120A is a new global transcription activator with bipartite functional domains. Genes to Cells 6:2, pages 165-174.
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Akiko Kobayashi, Tsuyoshi Miyake, Yoshifumi Ohyama, Masashi Kawaichi & Tetsuro Kokubo. (2001) Mutations in the TATA-binding Protein, Affecting Transcriptional Activation, Show Synthetic Lethality with the TAF145Gene Lacking the TAF N-terminal Domain in Saccharomyces cerevisiae. Journal of Biological Chemistry 276:1, pages 395-405.
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Marc Lemaire, Jun Xie, Michael Meisterernst & Martine A. Collart. (2000) The NC2 repressor is dispensable in yeast mutated for the Sin4p component of the holoenzyme and plays roles similar to Mot1p in vivo. Molecular Microbiology 36:1, pages 163-173.
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