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Molecular and Cellular Biology Volume 21, 2001 - Issue 22
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Transcriptional Regulation

Nucleosomes Are Translationally Positioned on the Active Allele and Rotationally Positioned on the Inactive Allele of the HPRT Promoter

Chien Chen1 Department of Biochemistry and Molecular Biology;2 Center for Mammalian Genetics
&
Thomas P. Yang1 Department of Biochemistry and Molecular Biology;2 Center for Mammalian Genetics;3 Division of Pediatric Genetics, University of Florida, Gainesville, Florida32610Correspondence[email protected]
Pages 7682-7695 | Received 08 Jun 2001, Accepted 20 Aug 2001, Published online: 28 Mar 2023

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Sung-Hae Lee Kang, Christine Mione Kiefer & Thomas P. Yang. (2003) Role of the Promoter in Maintaining Transcriptionally Active Chromatin Structure and DNA Methylation Patterns In Vivo. Molecular and Cellular Biology 23:12, pages 4150-4161.
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Jennifer F. Garcia, Phillip A. Dumesic, Paul D. Hartley, Hana El-Samad & Hiten D. Madhani. (2010) Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions. Genes & Development 24:16, pages 1758-1771.
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Shuwen Wang, Chunguang Hu & Jiyue Zhu. (2010) Distinct and Temporal Roles of Nucleosomal Remodeling and Histone Deacetylation in the Repression of the hTERT Gene . Molecular Biology of the Cell 21:5, pages 821-832.
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Bridget Keenen & Ivana L. de la Serna. (2009) Chromatin remodeling in Embryonic stem cells: Regulating the balance between pluripotency and differentiation. Journal of Cellular Physiology 219:1, pages 1-7.
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Hua Bai, Jing Zhou & Da-jun Deng. (2009) Nucleosome positions and differential methylation status of various regions within MLH1 CpG island. Chinese Journal of Cancer Research 20:4, pages 237-242.
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Pelin Akan & Panos Deloukas. (2008) DNA sequence and structural properties as predictors of human and mouse promoters. Gene 410:1, pages 165-176.
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Fatih Ozsolak, Jun S Song, X Shirley Liu & David E Fisher. (2007) High-throughput mapping of the chromatin structure of human promoters. Nature Biotechnology 25:2, pages 244-248.
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Catherine L Anderson & Carolyn J Brown. (2005) Epigenetic predisposition to expression of TIMP1 from the human inactive X chromosome. BMC Genetics 6:1.
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S. Rodriguez-Jato, R. D. Nicholls, D. J. Driscoll & T. P. Yang. (2005) Characterization of cis- and trans-acting elements in the imprinted human SNURF-SNRPN locus. Nucleic Acids Research 33:15, pages 4740-4753.
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Martin ANGERS, Régen DROUIN, Magdalena BACHVAROVA, Isabelle PARADIS, Brad BISSELLMakoto HIROMURAAnny USHEVADimcho BACHVAROV. (2005) In vivo DNase I-mediated footprinting analysis along the human bradykinin B1 receptor ( BDKRB1 ) gene promoter: evidence for cell-specific regulation . Biochemical Journal 389:1, pages 37-46.
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François Vigneault & Régen Drouin. (2005) Optimal conditions and specific characteristics of Vent exo– DNA polymerase in ligation-mediated polymerase chain reaction protocols . Biochemistry and Cell Biology 83:2, pages 147-165.
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Meredith L. Hanel, Jason C.Y. Lau, Isabelle Paradis, R�gen Drouin & Rachel Wevrick. (2005) Chromatin modification of the human imprintedNDN (necdin) gene detected by in vivo footprinting. Journal of Cellular Biochemistry 94:5, pages 1046-1057.
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Hannah R. Cohen, Morgan E. Royce-Tolland, Kathleen A. Worringer & Barbara Panning. 2005. Epigenetics and Chromatin. Epigenetics and Chromatin 91 122 .
Brian P Chadwick & Huntington F Willard. (2003) Barring gene expression after XIST: maintaining facultative heterochromatin on the inactive X. Seminars in Cell & Developmental Biology 14:6, pages 359-367.
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Corey D. Braastad, Zhiyong Han & Eric A. Hendrickson. (2003) Constitutive DNase I Hypersensitivity of p53-Regulated Promoters. Journal of Biological Chemistry 278:10, pages 8261-8268.
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Rajan M. Thomas, Kamran Haleem, Abu B. Siddique, William J. Simmons, Namita Sen, Da-Jun Zhang & Vincent K. Tsiagbe. (2003) Regulation of Mouse Mammary Tumor Virus env Transcriptional Activator Initiated Mammary Tumor Virus Superantigen Transcripts in Lymphomas of SJL/J Mice: Role of Ikaros, Demethylation, and Chromatin Structural Change in the Transcriptional Activation of Mammary Tumor Virus Superantigen  . The Journal of Immunology 170:1, pages 218-227.
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Micaela Caserta, Loredana Verdone & Ernesto Di Mauro. (2002) Aspects of Nucleosomal Positional Flexibility and Fluidity. ChemBioChem 3:12, pages 1172-1182.
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