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Gene Expression

Global and Specific Translational Regulation in the Genomic Response of Saccharomyces cerevisiae to a Rapid Transfer from a Fermentable to a Nonfermentable Carbon Source

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Pages 916-927 | Received 23 May 2000, Accepted 31 Oct 2000, Published online: 27 Mar 2023

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Linda F. Bisson. 2019. Yeasts in the Production of Wine. Yeasts in the Production of Wine 165 209 .
Parimal Samir, Christopher M. Browne, Rahul, Ming Sun, Bingxin Shen, Wen Li, Joachim Frank & Andrew J. Link. (2018) Identification of Changing Ribosome Protein Compositions using Mass Spectrometry. PROTEOMICS 18:20.
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Isaac Corcoles-Saez, Kangzhen Dong, Anthony L. Johnson, Erik Waskiewicz, Michael Costanzo, Charles Boone & Rita S. Cha. (2018) Essential Function of Mec1, the Budding Yeast ATM/ATR Checkpoint-Response Kinase, in Protein Homeostasis. Developmental Cell 46:4, pages 495-503.e2.
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Michael D Bucci, Erin Weisenhorn, Spencer Haws, Zhiyuan Yao, Ginelle Zimmerman, Molly Gannon, Janet Taggart, Traci Lee, Daniel J Klionsky, Jason Russell, Joshua Coon & David J Eide. (2018) An Autophagy-Independent Role for ATG41 in Sulfur Metabolism During Zinc Deficiency . Genetics 208:3, pages 1115-1130.
Crossref
Helen A. King, Hazim F. El-Sharif, Ana M. Matia-González, Valentina Iadevaia, Adeola Fowotade, Subrayal M. Reddy & André P. Gerber. (2017) Generation of ribosome imprinted polymers for sensitive detection of translational responses. Scientific Reports 7:1.
Crossref
Leena Thorat, Dasharath Oulkar, Kaushik Banerjee, Sushama M. Gaikwad & Bimalendu B. Nath. (2017) High-throughput mass spectrometry analysis revealed a role for glucosamine in potentiating recovery following desiccation stress in Chironomus. Scientific Reports 7:1.
Crossref
Ana Mendes-Ferreira, Marcel lí del Olmo, José García-Martínez & José E. Pérez-Ortín. 2017. Biology of Microorganisms on Grapes, in Must and in Wine. Biology of Microorganisms on Grapes, in Must and in Wine 573 604 .
Rachael Di Santo, Soufiane Aboulhouda & David E Weinberg. (2016) The fail-safe mechanism of post-transcriptional silencing of unspliced HAC1 mRNA. eLife 5.
Crossref
Mary T. Couvillion, Iliana C. Soto, Gergana Shipkovenska & L. Stirling Churchman. (2016) Synchronized mitochondrial and cytosolic translation programs. Nature 533:7604, pages 499-503.
Crossref
Susanne Huch, Jessie Gommlich, Mridula Muppavarapu, Carla Beckham & Tracy Nissan. (2016) Membrane-association of mRNA decapping factors is independent of stress in budding yeast. Scientific Reports 6:1.
Crossref
Dominika Foretek, Jingyan Wu, Anita K. Hopper & Magdalena Boguta. (2016) Control of Saccharomyces cerevisiae pre-tRNA processing by environmental conditions . RNA 22:3, pages 339-349.
Crossref
Maika G. Mitchell. 2016. Cell Biology. Cell Biology 171 247 .
Dmitry E Andreev, Patrick BF O’Connor, Alexander V Zhdanov, Ruslan I Dmitriev, Ivan N Shatsky, Dmitri B Papkovsky & Pavel V Baranov. (2015) Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes. Genome Biology 16:1.
Crossref
Roland Prielhofer, Stephanie P Cartwright, Alexandra B Graf, Minoska Valli, Roslyn M Bill, Diethard Mattanovich & Brigitte Gasser. (2015) Pichia pastoris regulates its gene-specific response to different carbon sources at the transcriptional, rather than the translational, level. BMC Genomics 16:1.
Crossref
Ira Bavli‐Kertselli, Daniel Melamed, Lavi Bar‐Ziv, Hila Volf & Yoav Arava. (2014) Overexpression of eukaryotic initiation factor 5 rescues the translational defect of tpk1 w in a manner that necessitates a novel phosphorylation site . The FEBS Journal 282:3, pages 504-520.
Crossref
L.F. Bisson & G.A. Walker. 2015. Advances in Fermented Foods and Beverages. Advances in Fermented Foods and Beverages 435 476 .
H. A. King & A. P. Gerber. (2014) Translatome profiling: methods for genome-scale analysis of mRNA translation. Briefings in Functional Genomics.
Crossref
Neil Andrew Brown, Laure Nicolas Annick Ries & Gustavo Henrique Goldman. (2014) How nutritional status signalling coordinates metabolism and lignocellulolytic enzyme secretion. Fungal Genetics and Biology 72, pages 48-63.
Crossref
Susanne Huch & Tracy Nissan. (2014) Interrelations between translation and general mRNA degradation in yeast . WIREs RNA 5:6, pages 747-763.
Crossref
David Pincus, Andrés Aranda-Díaz, Ignacio A. Zuleta, Peter Walter & Hana El-Samad. (2014) Delayed Ras/PKA signaling augments the unfolded protein response. Proceedings of the National Academy of Sciences 111:41, pages 14800-14805.
Crossref
Linan Chen, Jason G Dumelie, Xiao Li, Matthew HK Cheng, Zhiyong Yang, John D Laver, Najeeb U Siddiqui, J Timothy Westwood, Quaid Morris, Howard D Lipshitz & Craig A Smibert. (2014) Global regulation of mRNA translation and stability in the early Drosophila embryo by the Smaug RNA-binding protein. Genome Biology 15:1, pages R4.
Crossref
W. Rowe, C. J. Kershaw, L. M. Castelli, J. L. Costello, M. P. Ashe, C. M. Grant, P. F. G. Sims, G. D. Pavitt & S. J. Hubbard. (2013) Puf3p induces translational repression of genes linked to oxidative stress. Nucleic Acids Research 42:2, pages 1026-1041.
Crossref
Kyuho Han, Ariel Jaimovich, Gautam Dey, Davide Ruggero, Oded Meyuhas, Nahum Sonenberg & Tobias Meyer. (2013) Parallel measurement of dynamic changes in translation rates in single cells. Nature Methods 11:1, pages 86-93.
Crossref
Minh-Ha T. Do, Taeshin Kim, Feng He, Hiral Dave, Rachel E. Intriago, Uriah A. Astorga, Sonia Jain & Mark A. Lawson. (2014) Polyribosome and ribonucleoprotein complex redistribution of mRNA induced by GnRH involves both EIF2AK3 and MAPK signaling. Molecular and Cellular Endocrinology 382:1, pages 346-357.
Crossref
Rahul Kumar, Petri-Jaan Lahtvee & Jens Nielsen. 2014. Molecular Mechanisms in Yeast Carbon Metabolism. Molecular Mechanisms in Yeast Carbon Metabolism 83 96 .
Flora Picard, Pascal Loubière, Laurence Girbal & Muriel Cocaign-Bousquet. (2013) The significance of translation regulation in the stress response. BMC Genomics 14:1.
Crossref
Tong Wang, Yizhi Cui, Jingjie Jin, Jiahui Guo, Guibin Wang, Xingfeng Yin, Qing-Yu He & Gong Zhang. (2013) Translating mRNAs strongly correlate to proteins in a multivariate manner and their translation ratios are phenotype specific. Nucleic Acids Research 41:9, pages 4743-4754.
Crossref
Fiona A. Summers, Ronald P. Mason & Marilyn Ehrenshaft. (2013) Development of immunoblotting techniques for DNA radical detection. Free Radical Biology and Medicine 56, pages 64-71.
Crossref
M Gomar-Alba, E Jiménez-Martí & M del Olmo. (2012) The Saccharomyces cerevisiae Hot1p regulated gene YHR087W (HGI1) has a role in translation upon high glucose concentration stress. BMC Molecular Biology 13:1.
Crossref
Clare E. SimpsonMark P. Ashe. (2012) Adaptation to stress in yeast: to translate or not?. Biochemical Society Transactions 40:4, pages 794-799.
Crossref
Sungchul JiSungchul Ji. 2012. Molecular Theory of the Living Cell. Molecular Theory of the Living Cell 255 268 .
Sungchul JiSungchul Ji. 2012. Molecular Theory of the Living Cell. Molecular Theory of the Living Cell 297 390 .
Joshua A. Arribere, Jennifer A. Doudna & Wendy V. Gilbert. (2011) Reconsidering Movement of Eukaryotic mRNAs between Polysomes and P Bodies. Molecular Cell 44:5, pages 745-758.
Crossref
Lydia M. Castelli, Jennifer Lui, Susan G. Campbell, William Rowe, Leo A. H. Zeef, Leah E. A. Holmes, Nathaniel P. Hoyle, Jonathon Bone, Julian N. Selley, Paul F. G. Sims & Mark P. Ashe. (2011) Glucose depletion inhibits translation initiation via eIF4A loss and subsequent 48S preinitiation complex accumulation, while the pentose phosphate pathway is coordinately up-regulated. Molecular Biology of the Cell 22:18, pages 3379-3393.
Crossref
M. Zampieri, C. Altafini, F. Eduati, B. Di Camillo, G. Toffolo & G. De Palo. (2011) Adaptation as a genome-wide autoregulatory principle in the stress response of yeast. IET Systems Biology 5:4, pages 269-279.
Crossref
Hagai Abeliovich. (2011) Stationary-Phase Mitophagy in Respiring Saccharomyces cerevisiae . Antioxidants & Redox Signaling 14:10, pages 2003-2011.
Crossref
Jörg Soppa. (2011) Functional Genomic and Advanced Genetic Studies Reveal Novel Insights into the Metabolism, Regulation, and Biology of Haloferax volcanii . Archaea 2011, pages 1-14.
Crossref
José E. Pérez-Ortín & José García-Martínez. 2011. Molecular Wine Microbiology. Molecular Wine Microbiology 143 168 .
Jörg Soppa. 2011. Halophiles and Hypersaline Environments. Halophiles and Hypersaline Environments 191 205 .
Jörg Soppa. 2011. Halophiles and Hypersaline Environments. Halophiles and Hypersaline Environments 191 205 .
Tomáš Mašek, Leoš Valášek & Martin Pospíšek. 2011. RNA. RNA 293 309 .
Jildau Bouwman, José Kiewiet, Alexander Lindenbergh, Karen van Eunen, Marco Siderius & Barbara M. Bakker. (2010) Metabolic regulation rather than de novo enzyme synthesis dominates the osmo‐adaptation of yeast . Yeast 28:1, pages 43-53.
Crossref
Marielis E Rivera-Ruiz, José F Rodríguez-Quiñones, Pearl Akamine & José R Rodríguez-Medina. (2010) Post-transcriptional regulation in the myo1Δ mutant of Saccharomyces cerevisiae. BMC Genomics 11:1.
Crossref
Rocío Gómez-Pastor, Roberto Pérez-Torrado, Elisa Cabiscol & Emilia Matallana. (2010) Transcriptomic and proteomic insights of the wine yeast biomass propagation process. FEMS Yeast Research 10:7, pages 870-884.
Crossref
Takao Mori, Chiharu Ogasawara, Toshifumi Inada, Markus Englert, Hildburg Beier, Mine TakezawaToshiya Endo & Tohru Yoshihisa. (2010) Dual Functions of Yeast tRNA Ligase in the Unfolded Protein Response: Unconventional Cytoplasmic Splicing of HAC1 Pre-mRNA Is Not Sufficient to Release Translational Attenuation . Molecular Biology of the Cell 21:21, pages 3722-3734.
Crossref
Jonas Warringer, Malin Hult, Sergi Regot, Francesc Posas & Per Sunnerhagen. (2010) The HOG Pathway Dictates the Short-Term Translational Response after Hyperosmotic Shock. Molecular Biology of the Cell 21:17, pages 3080-3092.
Crossref
Jennifer LuiSusan G. CampbellMark P. Ashe. (2010) Inhibition of translation initiation following glucose depletion in yeast facilitates a rationalization of mRNA content. Biochemical Society Transactions 38:4, pages 1131-1136.
Crossref
Gabriel del Rio, Dirk Koschützki & Gerardo Coello. (2009) How to identify essential genes from molecular networks?. BMC Systems Biology 3:1.
Crossref
Craig Lawless, Richard D Pearson, Julian N Selley, Julia B Smirnova, Christopher M Grant, Mark P Ashe, Graham D Pavitt & Simon J Hubbard. (2009) Upstream sequence elements direct post-transcriptional regulation of gene expression under stress conditions in yeast. BMC Genomics 10:1.
Crossref
J. van den Brink, M. Akeroyd, R. van der Hoeven, J. T. Pronk, J. H. de Winde & P. Daran-Lapujade. (2009) Energetic limits to metabolic flexibility: responses of Saccharomyces cerevisiae to glucose–galactose transitions. Microbiology 155:4, pages 1340-1350.
Crossref
Gregory R. Stuart, William C. Copeland & Micheline K. Strand. (2009) Construction and application of a protein and genetic interaction network (yeast interactome). Nucleic Acids Research 37:7, pages e54-e54.
Crossref
Mariam Brenneis & Jörg Soppa. (2009) Regulation of Translation in Haloarchaea: 5′- and 3′-UTRs Are Essential and Have to Functionally Interact In Vivo. PLoS ONE 4:2, pages e4484.
Crossref
Minh-Ha T. Do, Sharon J. Santos & Mark A. Lawson. (2009) GNRH Induces the Unfolded Protein Response in the LβT2 Pituitary Gonadotrope Cell Line. Molecular Endocrinology 23:1, pages 100-112.
Crossref
José E. Pérez-Ortín, Marcel·lí del Olmo & José García-Martínez. 2009. Biology of Microorganisms on Grapes, in Must and in Wine. Biology of Microorganisms on Grapes, in Must and in Wine 469 488 .
Tetsuji Higashi, Yoshihide Tanaka, Randeep Rakwal, Junko Shibato, Shin-ichi Wakida & Hitoshi Iwahashi. 2009. Atmospheric and Biological Environmental Monitoring. Atmospheric and Biological Environmental Monitoring 207 218 .
J. Soppa, A. Baumann, M. Brenneis, M. Dambeck, O. Hering & C. Lange. (2008) Genomics and functional genomics with haloarchaea. Archives of Microbiology 190:3, pages 197-215.
Crossref
Adi Loya, Lilach Pnueli, Yahav Yosefzon, Ydo Wexler, Michal Ziv-Ukelson & Yoav Arava. (2008) The 3′-UTR mediates the cellular localization of an mRNA encoding a short plasma membrane protein. RNA 14:7, pages 1352-1365.
Crossref
Daniel Melamed, Lilach Pnueli & Yoav Arava. (2008) Yeast translational response to high salinity: Global analysis reveals regulation at multiple levels. RNA 14:7, pages 1337-1351.
Crossref
Brian R. Gibson, Stephen J. Lawrence, Chris A. Boulton, Wendy G. Box, Neil S. Graham, Robert S.T. Linforth & Katherine A. Smart. (2008) The oxidative stress response of a lager brewing yeast strain during industrial propagation and fermentation. FEMS Yeast Research 8:4, pages 574-585.
Crossref
R. E. Halbeisen, A. Galgano, T. Scherrer & A. P. Gerber. (2007) Post-transcriptional gene regulation: From genome-wide studies to principles. Cellular and Molecular Life Sciences 65:5.
Crossref
Tom Payne, Colin Hanfrey, Amy L. Bishop, Anthony J. Michael, Simon V. Avery & David B. Archer. (2008) Transcript‐specific translational regulation in the unfolded protein response of Saccharomyces cerevisiae . FEBS Letters 582:4, pages 503-509.
Crossref
Daniel H. Lackner & Jürg Bähler. 2008. 199 251 .
Naama Eldad & Yoav Arava. 2008. Post-Transcriptional Gene Regulation. Post-Transcriptional Gene Regulation 231 242 .
Christian Lange, Alexander Zaigler, Mathias Hammelmann, Jens Twellmeyer, Günter Raddatz, Stephan C Schuster, Dieter Oesterhelt & Jörg Soppa. (2007) Genome-wide analysis of growth phase-dependent translational and transcriptional regulation in halophilic archaea. BMC Genomics 8:1.
Crossref
Thomas Guillemette, Noël NME van Peij, Theo Goosen, Karin Lanthaler, Geoffrey D Robson, Cees AMJJ van den Hondel, Hein Stam & David B Archer. (2007) Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger. BMC Genomics 8:1.
Crossref
Martin Schröder & Randal Kaufman. (2007) Ire1. AfCS-Nature Molecule Pages.
Crossref
Robert D. GuzyMatthew M. MackPaul T. Schumacker. (2007) Mitochondrial Complex III is Required for Hypoxia-Induced ROS Production and Gene Transcription in Yeast. Antioxidants & Redox Signaling 9:9, pages 1317-1328.
Crossref
Krishnamurthy Natarajan, Matthew J. Marton & Alan G. Hinnebusch. 2007. Methods for General and Molecular Microbiology. Methods for General and Molecular Microbiology 978 994 .
K Yalçın Arga, Z İlsen Önsan, Betül Kırdar, Kutlu Ö Ülgen & Jens Nielsen. (2007) Understanding signaling in yeast: Insights from network analysis. Biotechnology and Bioengineering 97:5, pages 1246-1258.
Crossref
Muriel Brengues & Roy Parker. (2007) Accumulation of Polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-Bodies in Saccharomyces cerevisiae . Molecular Biology of the Cell 18:7, pages 2592-2602.
Crossref
Per Sunnerhagen. (2007) Cytoplasmatic post-transcriptional regulation and intracellular signalling. Molecular Genetics and Genomics 277:4, pages 341-355.
Crossref
Linda F. Bisson, Jonathan E. Karpel, Vidhya Ramakrishnan & Lucy Joseph*. 2007. 65 121 .
Cosmin Saveanu, Micheline Fromont-Racine & Alain Jacquier. 2007. Yeast Gene Analysis - Second Edition. Yeast Gene Analysis - Second Edition 415 444 .
Marianne Koritzinsky & Bradly G. Wouters. 2007. Oxygen Biology and Hypoxia. Oxygen Biology and Hypoxia 247 273 .
Daniel Melamed & Yoav Arava. 2007. Translation Initiation: Cell Biology, High‐Throughput Methods, and Chemical‐Based Approaches. Translation Initiation: Cell Biology, High‐Throughput Methods, and Chemical‐Based Approaches 177 201 .
Naama Eldad & Yoav Arava. 2007. Translation Initiation: Cell Biology, High‐Throughput Methods, and Chemical‐Based Approaches. Translation Initiation: Cell Biology, High‐Throughput Methods, and Chemical‐Based Approaches 163 175 .
Natalie Strudwick & Martin Schröder. 2007. Systems Biology. Systems Biology 69 155 .
Hai‐Long Hou, Yu‐Xian Shen, Hong‐Yan Zhu, Hao Sun, Xue‐Bo Yan, Hui Fang & Jiang‐Ning Zhou. (2006) Alterations of hHrd1 expression are related to hyperphosphorylated tau in the hippocampus in Alzheimer's disease. Journal of Neuroscience Research 84:8, pages 1862-1870.
Crossref
Stefanie Scheu, Daniel B Stetson, R Lee Reinhardt, Jess H Leber, Markus Mohrs & Richard M Locksley. (2006) Activation of the integrated stress response during T helper cell differentiation. Nature Immunology 7:6, pages 644-651.
Crossref
François McNicoll, Jolyne Drummelsmith, Michaela Müller, Éric Madore, Nathalie Boilard, Marc Ouellette & Barbara Papadopoulou. (2006) A combined proteomic and transcriptomic approach to the study of stage differentiation inLeishmania infantum. PROTEOMICS 6:12, pages 3567-3581.
Crossref
Swarna Swaminathan, Tomas Masek, Claes Molin, Martin Pospisek & Per Sunnerhagen. (2006) Rck2 Is Required for Reprogramming of Ribosomes during Oxidative Stress. Molecular Biology of the Cell 17:3, pages 1472-1482.
Crossref
Agnieszka Lewandowska, Magdalena Gierszewska, Jaroslaw Marszalek & Krzysztof Liberek. (2006) Hsp78 chaperone functions in restoration of mitochondrial network following heat stress. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1763:2, pages 141-151.
Crossref
Paul K. Wolber, Patrick J. Collins, Anne B. Lucas, Anniek De Witte & Karen W. Shannon. 2006. DNA Microarrays, Part A: Array Platforms and Wet-Bench Protocols. DNA Microarrays, Part A: Array Platforms and Wet-Bench Protocols 28 57 .
D.B. Archer & G. Turner. 2006. Fungal Genomics. Fungal Genomics 75 96 .
Suzanne Miyamoto. 2006. Lymphocyte Signal Transduction. Lymphocyte Signal Transduction 171 188 .
Juan Mata, Samuel Marguerat & Jürg Bähler. (2005) Post-transcriptional control of gene expression: a genome-wide perspective. Trends in Biochemical Sciences 30:9, pages 506-514.
Crossref
Martin SchröderRandal J. Kaufman. (2005) THE MAMMALIAN UNFOLDED PROTEIN RESPONSE. Annual Review of Biochemistry 74:1, pages 739-789.
Crossref
María Eugenia ZanettiIng-Feng ChangFangcheng GongDavid W. GalbraithJulia Bailey-Serres. (2005) Immunopurification of Polyribosomal Complexes of Arabidopsis for Global Analysis of Gene Expression. Plant Physiology 138:2, pages 624-635.
Crossref
David B. Carlini. (2005) Context-Dependent Codon Bias and Messenger RNA Longevity in the Yeast Transcriptome. Molecular Biology and Evolution 22:6, pages 1403-1411.
Crossref
Martin Schröder & Randal J. Kaufman. (2005) ER stress and the unfolded protein response. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 569:1-2, pages 29-63.
Crossref
Tomas Masek, Vaclav Vopalensky, Petra Suchomelova & Martin Pospisek. (2005) Denaturing RNA electrophoresis in TAE agarose gels. Analytical Biochemistry 336:1, pages 46-50.
Crossref
Haley Hieronymus & Pamela A. Silver. (2004) A systems view of mRNP biology. Genes & Development 18:23, pages 2845-2860.
Crossref
D KOBI, S ZUGMEYER, S POTIER & L JAQUETGUTFREUND. (2004) Two-dimensional protein map of an ?ale?-brewing yeast strain: proteome dynamics during fermentation. FEMS Yeast Research 5:3, pages 213-230.
Crossref
Andreas Beyer, Jens Hollunder, Heinz-Peter Nasheuer & Thomas Wilhelm. (2004) Post-transcriptional Expression Regulation in the Yeast Saccharomyces cerevisiae on a Genomic Scale. Molecular & Cellular Proteomics 3:11, pages 1083-1092.
Crossref
T. Majtán, G. Bukovská & J. Timko. (2004) DNA microarrays — techniques and applications in microbial systems. Folia Microbiologica 49:6.
Crossref
Michael C. Lorenz, Jennifer A. Bender & Gerald R. Fink. (2004) Transcriptional Response of Candida albicans upon Internalization by Macrophages . Eukaryotic Cell 3:5, pages 1076-1087.
Crossref
José Garcı́a-Martı́nez, Agustı́n Aranda & José E Pérez-Ortı́n. (2004) Genomic Run-On Evaluates Transcription Rates for All Yeast Genes and Identifies Gene Regulatory Mechanisms. Molecular Cell 15:2, pages 303-313.
Crossref
Riki Kawaguchi, Thomas Girke, Elizabeth A. Bray & Julia Bailey‐Serres. (2004) Differential mRNA translation contributes to gene regulation under non‐stress and dehydration stress conditions in Arabidopsis thaliana . The Plant Journal 38:5, pages 823-839.
Crossref
Kathryn A. Nguyen, Sharon J. Santos, Marit K. Kreidel, Alejandro L. Diaz, Rodolfo Rey & Mark A. Lawson. (2004) Acute Regulation of Translation Initiation by Gonadotropin-Releasing Hormone in the Gonadotrope Cell Line LβT2. Molecular Endocrinology 18:5, pages 1301-1312.
Crossref
Vivian L. MacKay, Xiaohong Li, Mark R. Flory, Eileen Turcott, G. Lynn Law, Kyle A. Serikawa, X.L. Xu, Hookeun Lee, David R. Goodlett, Ruedi Aebersold, Lue Ping Zhao & David R. Morris. (2004) Gene Expression Analyzed by High-resolution State Array Analysis and Quantitative Proteomics. Molecular & Cellular Proteomics 3:5, pages 478-489.
Crossref
Vinagolu K Rajasekhar & Eric C Holland. (2004) Postgenomic global analysis of translational control induced by oncogenic signaling. Oncogene 23:18, pages 3248-3264.
Crossref
Xiaoli Qin & Peter Sarnow. (2004) Preferential Translation of Internal Ribosome Entry Site-containing mRNAs during the Mitotic Cycle in Mammalian Cells. Journal of Biological Chemistry 279:14, pages 13721-13728.
Crossref
Aneta Kaniak, Zhixiong Xue, Daniel Macool, Jeong-Ho Kim & Mark Johnston. (2004) Regulatory Network Connecting Two Glucose Signal Transduction Pathways in Saccharomyces cerevisiae . Eukaryotic Cell 3:1, pages 221-231.
Crossref
Karine Berthelot, Mark Muldoon, Lukas Rajkowitsch, John Hughes & John E. G. McCarthy. (2003) Dynamics and processivity of 40S ribosome scanning on mRNA in yeast. Molecular Microbiology 51:4, pages 987-1001.
Crossref
Ying Liu & Stephen L Sturley. (2004) Nutritional genomics in yeast models. Nutrition 20:1, pages 166-172.
Crossref
Lukas Rajkowitsch, Cristina Vilela, Karine Berthelot, Carmen Velasco Ramirez & John E.G. McCarthy. (2004) Reinitiation and Recycling are Distinct Processes Occurring Downstream of Translation Termination in Yeast. Journal of Molecular Biology 335:1, pages 71-85.
Crossref
D. A. MacKenzie, D. J. Jeenes & D. B. Archer. 2004. Genetics and Biotechnology. Genetics and Biotechnology 289 315 .
Thomas Preiss, Julie Baron-Benhamou, Wilhelm Ansorge & Matthias W Hentze. (2003) Homodirectional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock. Nature Structural & Molecular Biology 10:12, pages 1039-1047.
Crossref
John C. Boothroyd, Ira Blader, Michael Cleary & Upinder Singh. (2003) DNA microarrays in parasitology: strengths and limitations. Trends in Parasitology 19:10, pages 470-476.
Crossref
Saul M. Honigberg & Kedar Purnapatre. (2003) Signal pathway integration in the switch from the mitotic cell cycle to meiosis in yeast. Journal of Cell Science 116:11, pages 2137-2147.
Crossref
Istabrak Borchani-Chabchoub, Raja Mokdad-Gargouri & Ali Gargouri. (2003) Glucose dependant negative translational control of the heterologous expression of the preS2 HBV antigen in yeast. Gene 311, pages 165-170.
Crossref
Yoav Arava, Yulei Wang, John D. Storey, Chih Long Liu, Patrick O. Brown & Daniel Herschlag. (2003) Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae . Proceedings of the National Academy of Sciences 100:7, pages 3889-3894.
Crossref
Kyle A. Serikawa, Xie Lillian Xu, Vivian L. MacKay, G. Lynn Law, Qin Zong, Lue Ping Zhao, Roger Bumgarner & David R. Morris. (2003) The Transcriptome and Its Translation during Recovery from Cell Cycle Arrest in Saccharomyces cerevisiae. Molecular & Cellular Proteomics 2:3, pages 191-204.
Crossref
C. Fredrik Wahlbom, Ricardo R. Cordero Otero, Willem H. van Zyl, Bärbel Hahn-Hägerdal & Leif J. Jönsson. (2003) Molecular Analysis of a Saccharomyces cerevisiae Mutant with Improved Ability To Utilize Xylose Shows Enhanced Expression of Proteins Involved in Transport, Initial Xylose Metabolism, and the Pentose Phosphate Pathway . Applied and Environmental Microbiology 69:2, pages 740-746.
Crossref
Randal J. Kaufman. 2003. Handbook of Cell Signaling. Handbook of Cell Signaling 311 317 .
Audrey P. Gasch. 2003. Yeast Stress Responses. Yeast Stress Responses 11 70 .
Kjeld Olesen, Troels Felding, Claes Gjermansen & Jørgen Hansen. (2002) The dynamics of the Saccharomyces carlsbergensis brewing yeast transcriptome during a production-scale lager beer fermentation . FEMS Yeast Research 2:4, pages 563-573.
Crossref
Edda Klipp, Reinhart Heinrich & Hermann‐Georg Holzhütter. (2002) Prediction of temporal gene expression. European Journal of Biochemistry 269:22, pages 5406-5413.
Crossref
José E Pérez-Ortı́n, José Garcı́a-Martı́nez & Trinidad M Alberola. (2002) DNA chips for yeast biotechnology. The case of wine yeasts. Journal of Biotechnology 98:2-3, pages 227-241.
Crossref
Stefan Hohmann. (2002) Osmotic Stress Signaling and Osmoadaptation in Yeasts. Microbiology and Molecular Biology Reviews 66:2, pages 300-372.
Crossref
Randal J. Kaufman, Donalyn Scheuner, Martin Schröder, Xiaohua Shen, Kyungho Lee, Chuan Yin Liu & Stacey M. Arnold. (2002) The unfolded protein response in nutrient sensing and differentiation. Nature Reviews Molecular Cell Biology 3:6, pages 411-421.
Crossref
Felipe S. Chambergo, Eric D. Bonaccorsi, Ari J.S. Ferreira, Augusto S.P. Ramos, José Ribamar FerreiraJúniorJúnior, José Abrahão-Neto, João P. Simon Farah & Hamza El-Dorry. (2002) Elucidation of the Metabolic Fate of Glucose in the Filamentous Fungus Trichoderma reesei Using Expressed Sequence Tag (EST) Analysis and cDNA Microarrays. Journal of Biological Chemistry 277:16, pages 13983-13988.
Crossref
Yoshinori MurataYuko MomoseMika HasegawaHitoshi IwahasiYasuhiko Komatsu. (2002) Cluster analysis and display of genome-wide expression profiles in dimethyl sulfoxide treatment. Chem-Bio Informatics Journal 2:1, pages 18-31.
Crossref
Kurt E. Kwast, Liang-Chuan Lai, Nina Menda, David T. JamesIIIIII, Susanne Aref & Patricia V. Burke. (2002) Genomic Analyses of Anaerobically Induced Genes in Saccharomyces cerevisiae : Functional Roles of Rox1 and Other Factors in Mediating the Anoxic Response . Journal of Bacteriology 184:1, pages 250-265.
Crossref
Yuko Momose & Hitoshi Iwahashi. (2009) Bioassay of cadmium using a DNA microarray: Genome‐wide expression patterns of Saccharomyces cerevisiae response to cadmium . Environmental Toxicology and Chemistry 20:10, pages 2353-2360.
Crossref
. (2001) Current Awareness. Comparative and Functional Genomics 2:4, pages 265-272.
Crossref
S Lucchini, A Thompson & J. C. D Hinton. (2001) Microarrays for microbiologists. Microbiology 147:6, pages 1403-1414.
Crossref
. (2001) Current Awareness. Yeast 18:7, pages 671-678.
Crossref

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