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Molecular and Cellular Biology Volume 22, 2002 - Issue 19
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Transcriptional Regulation

Core Promoter-Dependent TFIIB Conformation and a Role for TFIIB Conformation in Transcription Start Site Selection

Jennifer A. Fairley2 Wellcome Trust Biocentre, University of Dundee, DundeeDD1 5EHUnited Kingdom
,
Rachel Evans1 School of Biological Sciences, University of Manchester, ManchesterM13 9PTUnited Kingdom;2 Wellcome Trust Biocentre, University of Dundee, DundeeDD1 5EHUnited Kingdom
,
Nicola A. Hawkes2 Wellcome Trust Biocentre, University of Dundee, DundeeDD1 5EHUnited Kingdom
&
Stefan G. E. Roberts1 School of Biological Sciences, University of Manchester, ManchesterM13 9PTUnited Kingdom;2 Wellcome Trust Biocentre, University of Dundee, DundeeDD1 5EHUnited KingdomCorrespondence[email protected]
Pages 6697-6705 | Received 21 May 2002, Accepted 21 Jun 2002, Published online: 27 Mar 2023

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Wensheng Deng, Barbora Malecová, Thomas Oelgeschläger & Stefan G. E. Roberts. (2009) TFIIB Recognition Elements Control the TFIIA-NC2 Axis in Transcriptional Regulation. Molecular and Cellular Biology 29:6, pages 1389-1400.
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Mary C. Thomas & Cheng-Ming Chiang. (2006) The General Transcription Machinery and General Cofactors. Critical Reviews in Biochemistry and Molecular Biology 41:3, pages 105-178.
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Bo-Shiun Chen & Michael Hampsey. (2004) Functional Interaction between TFIIB and the Rpb2 Subunit of RNA Polymerase II: Implications for the Mechanism of Transcription Initiation. Molecular and Cellular Biology 24:9, pages 3983-3991.
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Thomas C. Tubon, William P. Tansey & Winship Herr. (2004) A Nonconserved Surface of the TFIIB Zinc Ribbon Domain Plays a Direct Role in RNA Polymerase II Recruitment. Molecular and Cellular Biology 24:7, pages 2863-2874.
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Zheng Chen & James L. Manley. (2003) Core Promoter Elements and TAFs Contribute to the Diversity of Transcriptional Activation in Vertebrates. Molecular and Cellular Biology 23:20, pages 7350-7362.
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Articles from other publishers (24)

Juan F Santana, Geoffrey S Collins, Mrutyunjaya Parida, Donal S Luse & David H Price. (2022) Differential dependencies of human RNA polymerase II promoters on TBP, TAF1, TFIIB and XPB. Nucleic Acids Research 50:16, pages 9127-9148.
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Robert J. Rooney. (2020) Multiple domains in the 50 kDa form of E4F1 regulate promoter-specific repression and E1A trans-activation. Gene 754, pages 144882.
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Aurélie Delannoy, Mikaël Poirier & Brendan Bell. (2019) Cat and Mouse: HIV Transcription in Latency, Immune Evasion and Cure/Remission Strategies. Viruses 11:3, pages 269.
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Stefan G. E. Roberts. 2016. The Wilms' Tumor (WT1) Gene. The Wilms' Tumor (WT1) Gene 137 154 .
Gue Su Chang, Angelika A. Noegel, Travis N. Mavrich, Rolf Müller, Lynn Tomsho, Elissa Ward, Marius Felder, Cizhong Jiang, Ludwig Eichinger, Gernot Glöckner, Stephan C. Schuster & B. Franklin Pugh. (2012) Unusual combinatorial involvement of poly-A/T tracts in organizing genes and chromatin in Dictyostelium . Genome Research 22:6, pages 1098-1106.
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Nancy E. Thompson, Bryan T. Glaser, Katherine M. Foley, Zachary F. Burton & Richard R. Burgess. (2009) Minimal Promoter Systems Reveal the Importance of Conserved Residues in the B-finger of Human Transcription Factor IIB. Journal of Biological Chemistry 284:37, pages 24754-24766.
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Laura M. ElsbyStefan G.E. Roberts. (2008) Interaction of the TFIIB zinc ribbon with RNA polymerase II. Biochemical Society Transactions 36:4, pages 595-598.
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Koji Kasahara, Sewon Ki, Kayo Aoyama, Hiroyuki Takahashi & Tetsuro Kokubo. (2008) Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II. Nucleic Acids Research 36:4, pages 1343-1357.
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Wensheng Deng & Stefan G. E. Roberts. (2007) TFIIB and the regulation of transcription by RNA polymerase II. Chromosoma 116:5, pages 417-429.
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W. DengS.G.E. Roberts. (2006) Core promoter elements recognized by transcription factor IIB. Biochemical Society Transactions 34:6, pages 1051-1053.
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G. Kausel, M. Salazar, L. Castro, T. Vera, A. Romero, M. Muller & J. Figueroa. (2006) Modular changes of cis-regulatory elements from two functional Pit1 genes in the duplicated genome ofCyprinus carpio. Journal of Cellular Biochemistry 99:3, pages 905-921.
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Inken Wierstra & Jürgen Alves. (2006) FOXM1c transactivates the human c-myc promoter directly via the two TATA boxes P1 and P2. FEBS Journal 273:20, pages 4645-4667.
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Hong Chen & Michael S Kilberg. (2006) Alignment of the Transcription Start Site Coincides with Increased Transcriptional Activity from the Human Asparagine Synthetase Gene Following Amino Acid Deprivation of HepG2 Cells. The Journal of Nutrition 136:10, pages 2463-2467.
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Laura M Elsby, Amanda J M O'Donnell, Laura M Green, Andrew D Sharrocks & Stefan G E Roberts. (2006) Assembly of transcription factor IIB at a promoter in vivo requires contact with RNA polymerase II . EMBO reports 7:9, pages 898-903.
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Samuel Y. Hou & Cheng-Ming Chiang. 2006. Gene Expression and Regulation. Gene Expression and Regulation 21 48 .
Wensheng Deng & Stefan G.E. Roberts. (2005) A core promoter element downstream of the TATA box that is recognized by TFIIB. Genes & Development 19:20, pages 2418-2423.
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M.S. KilbergY.-X. PanH. ChenV. Leung-Pineda. (2005) NUTRITIONAL CONTROL OF GENE EXPRESSION: How Mammalian Cells Respond to Amino Acid Limitation. Annual Review of Nutrition 25:1, pages 59-85.
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N. I. Gershenzon & I. P. Ioshikhes. (2004) Synergy of human Pol II core promoter elements revealed by statistical sequence analysis. Bioinformatics 21:8, pages 1295-1300.
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L.M. ElsbyS.G.E. Roberts. (2004) The role of TFIIB conformation in transcriptional regulation. Biochemical Society Transactions 32:6, pages 1098-1099.
Crossref
Wai S Choi, Yin C Lin & Jay D Gralla. (2004) The Schizosaccharomyces pombe Open Promoter Bubble: Mammalian-like Arrangement and Properties. Journal of Molecular Biology 340:5, pages 981-989.
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David A. BushnellKenneth D. WestoverRalph E. DavisRoger D. Kornberg. (2004) Structural Basis of Transcription: An RNA Polymerase II-TFIIB Cocrystal at 4.5 Angstroms. Science 303:5660, pages 983-988.
Crossref
Le Zheng, Klaus P. Hoeflich, Laura M. Elsby, Mahua Ghosh, Stefan G. E. Roberts & Mitsuhiko Ikura. (2004) FRET evidence for a conformational change in TFIIB upon TBP-DNA binding. European Journal of Biochemistry 271:4, pages 792-800.
Crossref
Stephen T. SmaleJames T. Kadonaga. (2003) The RNA Polymerase II Core Promoter. Annual Review of Biochemistry 72:1, pages 449-479.
Crossref
Joseph C Reese. (2003) Basal transcription factors. Current Opinion in Genetics & Development 13:2, pages 114-118.
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