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Gene Expression

Identification of cis Elements Directing Termination of Yeast Nonpolyadenylated snoRNA Transcripts

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Pages 6241-6252 | Received 18 Feb 2004, Accepted 14 Apr 2004, Published online: 27 Mar 2023

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Jonathan Merran & Jeffry L. Corden. (2017) Yeast RNA-Binding Protein Nab3 Regulates Genes Involved in Nitrogen Metabolism. Molecular and Cellular Biology 37:18.
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Miranda M. Darby, Leo Serebreni, Xuewen Pan, Jef D. Boeke & Jeffry L. Corden. (2012) The Nrd1-Nab3 Transcription Termination Pathway Acts in Opposition to Ras Signaling and Mediates Response to Nutrient Depletion. Molecular and Cellular Biology 32:10, pages 1762-1775.
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Nihal Terzi, L. Stirling Churchman, Lidia Vasiljeva, Jonathan Weissman & Stephen Buratowski. (2011) H3K4 Trimethylation by Set1 Promotes Efficient Termination by the Nrd1-Nab3-Sen1 Pathway . Molecular and Cellular Biology 31:17, pages 3569-3583.
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Eric J. Steinmetz, Sarah B. H. Ng, Joseph P. Cloute & David A. Brow. (2006) cis- and trans-Acting Determinants of Transcription Termination by Yeast RNA Polymerase II. Molecular and Cellular Biology 26:7, pages 2688-2696.
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Articles from other publishers (107)

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Belén Chaves-Arquero, Santiago Martínez-Lumbreras, Sergio Camero, Clara M Santiveri, Yasmina Mirassou, Ramón Campos-Olivas, Maria Ángeles Jiménez, Olga Calvo & José Manuel Pérez-Cañadillas. (2022) Structural basis of Nrd1–Nab3 heterodimerization. Life Science Alliance 5:4, pages e202101252.
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Molly R Gordon, Jin Zhu, Victoria Qu & Rong Li. (2021) A case of convergent-gene interference in the budding yeast knockout library causing chromosome instability. G3 Genes|Genomes|Genetics 11:5.
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A Elizabeth Hildreth, Mitchell A Ellison, Alex M Francette, Julia M Seraly, Lauren M Lotka & Karen M Arndt. (2020) The nucleosome DNA entry-exit site is important for transcription termination and prevention of pervasive transcription. eLife 9.
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Kwan Yin Lee, Anand Chopra, Giovanni L Burke, Ziyan Chen, Jack F Greenblatt, Kyle K Biggar & Marc D Meneghini. (2020) A crucial RNA-binding lysine residue in the Nab3 RRM domain undergoes SET1 and SET3-responsive methylation. Nucleic Acids Research 48:6, pages 2897-2911.
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Claudia Tanja MierkeClaudia Tanja Mierke. 2020. Cellular Mechanics and Biophysics. Cellular Mechanics and Biophysics 477 508 .
Dagmar Zigáčková, Veronika Rájecká & Štěpánka Vaňáčová. 2020. The Eukaryotic RNA Exosome. The Eukaryotic RNA Exosome 237 253 .
Sarah A. Peck, Katlyn D. Hughes, Jose F. Victorino & Amber L. Mosley. (2019) Writing a wrong: Coupled RNA polymerase II transcription and RNA quality control. WIREs RNA 10:4.
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Lea H. Gregersen, Richard Mitter, Alejandro P. Ugalde, Takayuki Nojima, Nicholas J. Proudfoot, Reuven Agami, Aengus Stewart & Jesper Q. Svejstrup. (2019) SCAF4 and SCAF8, mRNA Anti-Terminator Proteins. Cell 177:7, pages 1797-1813.e18.
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Travis J. Loya, Thomas W. O’Rourke, William C. Simke, Joshua B. Kelley & Daniel Reines. (2018) Nab3’s localization to a nuclear granule in response to nutrient deprivation is determined by its essential prion-like domain. PLOS ONE 13:12, pages e0209195.
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Marc Larochelle, Marc-Antoine Robert, Jean-Nicolas Hébert, Xiaochuan Liu, Dominick Matteau, Sébastien Rodrigue, Bin Tian, Pierre-Étienne Jacques & François Bachand. (2018) Common mechanism of transcription termination at coding and noncoding RNA genes in fission yeast. Nature Communications 9:1.
Crossref
Pragyan Singh, Upasana Saha, Sunirmal Paira & Biswadip Das. (2018) Nuclear mRNA Surveillance Mechanisms: Function and Links to Human Disease. Journal of Molecular Biology 430:14, pages 1993-2013.
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Courtney Whalen, Christine Tuohy, Thomas Tallo, James W Kaufman, Claire Moore & Jason N Kuehner. (2018) RNA Polymerase II Transcription Attenuation at the Yeast DNA Repair Gene, DEF1 , Involves Sen1-Dependent and Polyadenylation Site-Dependent Termination . G3 Genes|Genomes|Genetics 8:6, pages 2043-2058.
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Kwan Yin Lee, Ziyan Chen, River Jiang & Marc D Meneghini. (2018) H3K4 Methylation Dependent and Independent Chromatin Regulation by JHD2 and SET1 in Budding Yeast . G3 Genes|Genomes|Genetics 8:5, pages 1829-1839.
Crossref
Cedric Belair, Soyeong Sim & Sandra L. Wolin. (2017) Noncoding RNA Surveillance: The Ends Justify the Means. Chemical Reviews 118:8, pages 4422-4447.
Crossref
Hannah E. Mischo, Yujin Chun, Kevin M. Harlen, Brendan M. Smalec, Somdutta Dhir, L. Stirling Churchman & Stephen Buratowski. (2018) Cell-Cycle Modulation of Transcription Termination Factor Sen1. Molecular Cell 70:2, pages 312-326.e7.
Crossref
Karl J Niklas, A Keith Dunker & Inmaculada Yruela. (2018) The evolutionary origins of cell type diversification and the role of intrinsically disordered proteins. Journal of Experimental Botany 69:7, pages 1437-1446.
Crossref
Dorine Jeanne Mariëtte du Mee, Maxim Ivanov, Joseph Paul Parker, Stephen Buratowski & Sebastian Marquardt. (2018) Efficient termination of nuclear lncRNA transcription promotes mitochondrial genome maintenance. eLife 7.
Crossref
Craig L. Bennett & Albert R. La Spada. 2018. RNA Metabolism in Neurodegenerative Diseases. RNA Metabolism in Neurodegenerative Diseases 265 281 .
Elsa Franco-Echevarría, Noelia González-Polo, Silvia Zorrilla, Santiago Martínez-Lumbreras, Clara M. Santiveri, Ramón Campos-Olivas, Mar Sánchez, Olga Calvo, Beatriz González & José Manuel Pérez-Cañadillas. (2017) The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition. Nucleic Acids Research 45:17, pages 10293-10305.
Crossref
Xin Chen, Kunal Poorey, Melissa N. Carver, Ulrika Müller, Stefan Bekiranov, David T. Auble & David A. Brow. (2017) Transcriptomes of six mutants in the Sen1 pathway reveal combinatorial control of transcription termination across the Saccharomyces cerevisiae genome. PLOS Genetics 13:6, pages e1006863.
Crossref
Nicole Uwimana, Pierre Collin, Célia Jeronimo, Benjamin Haibe-Kains & François Robert. (2017) Bidirectional terminators in Saccharomyces cerevisiae prevent cryptic transcription from invading neighboring genes. Nucleic Acids Research 45:11, pages 6417-6426.
Crossref
Kevin Roy, Jason Gabunilas, Abigail Gillespie, Duy Ngo & Guillaume F. Chanfreau. (2016) Common genomic elements promote transcriptional and DNA replication roadblocks. Genome Research 26:10, pages 1363-1375.
Crossref
S. Aylin Cakiroglu, Judith B. Zaugg & Nicholas M. Luscombe. (2016) Backmasking in the yeast genome: encoding overlapping information for protein-coding and RNA degradation. Nucleic Acids Research 44:17, pages 8065-8072.
Crossref
Yulia Mostovoy, Alexander Thiemicke, Tiffany Y. Hsu & Rachel B. Brem. (2016) The Role of Transcription Factors at Antisense-Expressing Gene Pairs in Yeast. Genome Biology and Evolution 8:6, pages 1748-1761.
Crossref
Karen M. ArndtDaniel Reines. (2015) Termination of Transcription of Short Noncoding RNAs by RNA Polymerase II. Annual Review of Biochemistry 84:1, pages 381-404.
Crossref
Pawel Grzechnik, Michal Ryszard Gdula & Nick J. Proudfoot. (2015) Pcf11 orchestrates transcription termination pathways in yeast. Genes & Development 29:8, pages 849-861.
Crossref
Milo B. Fasken, R. Nicholas Laribee & Anita H. Corbett. (2015) Nab3 Facilitates the Function of the TRAMP Complex in RNA Processing via Recruitment of Rrp6 Independent of Nrd1. PLOS Genetics 11:3, pages e1005044.
Crossref
Melanie J. Fox, Hongyu Gao, Whitney R. Smith-Kinnaman, Yunlong Liu & Amber L. Mosley. (2015) The Exosome Component Rrp6 Is Required for RNA Polymerase II Termination at Specific Targets of the Nrd1-Nab3 Pathway. PLOS Genetics 11:2, pages e1004999.
Crossref
Erika Pearson & Claire Moore. (2014) The Evolutionarily Conserved Pol II Flap Loop Contributes to Proper Transcription Termination on Short Yeast Genes. Cell Reports 9:3, pages 821-828.
Crossref
Paul Schaughency, Jonathan Merran & Jeffry L. Corden. (2014) Genome-Wide Mapping of Yeast RNA Polymerase II Termination. PLoS Genetics 10:10, pages e1004632.
Crossref
Xin Chen, Ulrika Müller, Kaitlin E Sundling & David A Brow. (2014) Saccharomyces cerevisiae Sen1 as a Model for the Study of Mutations in Human Senataxin That Elicit Cerebellar Ataxia . Genetics 198:2, pages 577-590.
Crossref
Mina Fazlollahi, Eunjee Lee, Ivor Muroff, Xiang-Jun Lu, Pilar Gomez-Alcala, Helen C Causton & Harmen J Bussemaker. (2014) Harnessing Natural Sequence Variation to Dissect Posttranscriptional Regulatory Networks in Yeast. G3 Genes|Genomes|Genetics 4:8, pages 1539-1553.
Crossref
Veronika Bacikova, Josef Pasulka, Karel Kubicek & Richard Stefl. (2014) Structure and semi-sequence-specific RNA binding of Nrd1. Nucleic Acids Research 42:12, pages 8024-8038.
Crossref
Pawel Grzechnik, Sue Mei Tan-Wong & Nick J. Proudfoot. (2014) Terminate and make a loop: regulation of transcriptional directionality. Trends in Biochemical Sciences 39:7, pages 319-327.
Crossref
Dorine Rossetto, Myriam Cramet, Alice Y Wang, Anne‐Lise Steunou, Nicolas Lacoste, Julia M Schulze, Valérie Côté, Julie Monnet‐Saksouk, Sandra Piquet, Amine Nourani, Michael S Kobor & Jacques Côté. (2014) Eaf5/7/3 form a functionally independent NuA4 submodule linked to RNA polymerase II ‐coupled nucleosome recycling . The EMBO Journal 33:12, pages 1397-1415.
Crossref
Manuele Castelnuovo, Judith B. Zaugg, Elisa Guffanti, Andrea Maffioletti, Jurgi Camblong, Zhenyu Xu, Sandra Clauder-Münster, Lars M. Steinmetz, Nicholas M. Luscombe & Françoise Stutz. (2022) Role of histone modifications and early termination in pervasive transcription and antisense-mediated gene silencing in yeast. Nucleic Acids Research 42:7, pages 4348-4362.
Crossref
S. Yogesha, Joshua Mayfield & Yan Zhang. (2014) Cross-Talk of Phosphorylation and Prolyl Isomerization of the C-terminal Domain of RNA Polymerase II. Molecules 19:2, pages 1481-1511.
Crossref
Shaun Webb, Ralph D Hector, Grzegorz Kudla & Sander Granneman. (2014) PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast. Genome Biology 15:1, pages R8.
Crossref
Tineke L. Lenstra, Agnieszka Tudek, Sandra Clauder, Zhenyu Xu, Spyridon T. Pachis, Dik van Leenen, Patrick Kemmeren, Lars M. Steinmetz, Domenico Libri & Frank C. P. Holstege. (2013) The Role of Ctk1 Kinase in Termination of Small Non-Coding RNAs. PLoS ONE 8:12, pages e80495.
Crossref
Dong-hyuk Heo, Inhea Yoo, Jiwon Kong, Michael Lidschreiber, Andreas Mayer, Byung-Yi Choi, Yoonsoo Hahn, Patrick Cramer, Stephen Buratowski & Minkyu Kim. (2013) The RNA Polymerase II C-terminal Domain-interacting Domain of Yeast Nrd1 Contributes to the Choice of Termination Pathway and Couples to RNA Processing by the Nuclear Exosome. Journal of Biological Chemistry 288:51, pages 36676-36690.
Crossref
Cornelia KilchertLidia Vasiljeva. (2013) mRNA quality control goes transcriptional. Biochemical Society Transactions 41:6, pages 1666-1672.
Crossref
Jeffry L. Corden. (2013) RNA Polymerase II C-Terminal Domain: Tethering Transcription to Transcript and Template. Chemical Reviews 113:11, pages 8423-8455.
Crossref
Célia Jeronimo, Alain R. Bataille & François Robert. (2013) The Writers, Readers, and Functions of the RNA Polymerase II C-Terminal Domain Code. Chemical Reviews 113:11, pages 8491-8522.
Crossref
Dirk Eick & Matthias Geyer. (2013) The RNA Polymerase II Carboxy-Terminal Domain (CTD) Code. Chemical Reviews 113:11, pages 8456-8490.
Crossref
Travis J. Loya, Thomas W. O'Rourke, Natalya Degtyareva & Daniel Reines. (2013) A Network of Interdependent Molecular Interactions Describes a Higher Order Nrd1-Nab3 Complex Involved in Yeast Transcription Termination. Journal of Biological Chemistry 288:47, pages 34158-34167.
Crossref
Daniel Schulz, Bjoern Schwalb, Anja Kiesel, Carlo Baejen, Phillipp Torkler, Julien Gagneur, Johannes Soeding & Patrick Cramer. (2013) Transcriptome Surveillance by Selective Termination of Noncoding RNA Synthesis. Cell 155:5, pages 1075-1087.
Crossref
Diana B. Marina, Smita Shankar, Prashanthi Natarajan, Kenneth J. Finn & Hiten D. Madhani. (2013) A conserved ncRNA-binding protein recruits silencing factors to heterochromatin through an RNAi-independent mechanism. Genes & Development 27:17, pages 1851-1856.
Crossref
Patricia Richard & James L. Manley. (2013) How bidirectional becomes unidirectional. Nature Structural & Molecular Biology 20:9, pages 1022-1024.
Crossref
Minkyu Kim & Stephen Buratowski. 2013. Posttranscriptional Gene Regulation. Posttranscriptional Gene Regulation 19 40 .
Pia K. Andersen, Torben Heick Jensen & Søren Lykke-Andersen. (2013) Making ends meet: coordination between RNA 3′-end processing and transcription initiation. Wiley Interdisciplinary Reviews: RNA 4:3, pages 233-246.
Crossref
Dane Z. Hazelbaker, Sebastian Marquardt, Wiebke Wlotzka & Stephen Buratowski. (2013) Kinetic Competition between RNA Polymerase II and Sen1-Dependent Transcription Termination. Molecular Cell 49:1, pages 55-66.
Crossref
Hannah E. Mischo & Nick J. Proudfoot. (2013) Disengaging polymerase: Terminating RNA polymerase II transcription in budding yeast. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:1, pages 174-185.
Crossref
Brett N. Tomson & Karen M. Arndt. (2013) The many roles of the conserved eukaryotic Paf1 complex in regulating transcription, histone modifications, and disease states. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:1, pages 116-126.
Crossref
Odil Porrua, Fruzsina Hobor, Jocelyne Boulay, Karel Kubicek, Yves D‧Aubenton-Carafa, Rajani Kanth Gudipati, Richard Stefl & Domenico Libri. (2012) In vivo SELEX reveals novel sequence and structural determinants of Nrd1-Nab3-Sen1-dependent transcription termination . The EMBO Journal 31:19, pages 3935-3948.
Crossref
Christie S Chang, Astrid Clarke & Lorraine Pillus. (2012) Suppression Analysis of esa1 Mutants in Saccharomyces cerevisiae Links NAB3 to Transcriptional Silencing and Nucleolar Functions . G3 Genes|Genomes|Genetics 2:10, pages 1223-1232.
Crossref
T. J. Loya, T. W. O'Rourke & D. Reines. (2012) A genetic screen for terminator function in yeast identifies a role for a new functional domain in termination factor Nab3. Nucleic Acids Research 40:15, pages 7476-7491.
Crossref
Jean-François Noël, Stéphanie Larose, Sherif Abou Elela & Raymund J. Wellinger. (2012) Budding yeast telomerase RNA transcription termination is dictated by the Nrd1/Nab3 non-coding RNA termination pathway. Nucleic Acids Research 40:12, pages 5625-5636.
Crossref
Rajani Kanth Gudipati, Helen Neil, Frank Feuerbach, Christophe Malabat & Alain Jacquier. (2012) The yeast RPL9B gene is regulated by modulation between two modes of transcription termination . The EMBO Journal 31:10, pages 2427-2437.
Crossref
David W. Zhang, Juan B. Rodríguez-Molina, Joshua R. Tietjen, Corey M. Nemec & Aseem Z. Ansari. (2012) Emerging Views on the CTD Code. Genetics Research International 2012, pages 1-19.
Crossref
Peter Holub & Stepanka Vanacova. 2012. Eukaryotic RNases and their Partners in RNA Degradation and Biogenesis, Part A. Eukaryotic RNases and their Partners in RNA Degradation and Biogenesis, Part A 77 95 .
Ghada Ghazal, Jules Gagnon & Sherif Abou Elela. 2012. Transcriptional Regulation. Transcriptional Regulation 593 607 .
David E Levin. (2011) Regulation of Cell Wall Biogenesis in Saccharomyces cerevisiae : The Cell Wall Integrity Signaling Pathway . Genetics 189:4, pages 1145-1175.
Crossref
Jessie Colin, Domenico Libri & Odil Porrua. (2011) Cryptic Transcription and Early Termination in the Control of Gene Expression. Genetics Research International 2011, pages 1-10.
Crossref
Nuttara Jamonnak, Tyler J. Creamer, Miranda M. Darby, Paul Schaughency, Sarah J. Wheelan & Jeffry L. Corden. (2011) Yeast Nrd1, Nab3, and Sen1 transcriptome-wide binding maps suggest multiple roles in post-transcriptional RNA processing. RNA 17:11, pages 2011-2025.
Crossref
Tyler J. Creamer, Miranda M. Darby, Nuttara Jamonnak, Paul Schaughency, Haiping Hao, Sarah J. Wheelan & Jeffry L. Corden. (2011) Transcriptome-Wide Binding Sites for Components of the Saccharomyces cerevisiae Non-Poly(A) Termination Pathway: Nrd1, Nab3, and Sen1. PLoS Genetics 7:10, pages e1002329.
Crossref
Matthew Wood, Melissa Rawe, Gunnar Johansson, Shu Pang, Ryan S. Soderquist, Ami V. Patel, Sandra Nelson, William Seibel, Nancy Ratner & Yolanda Sanchez. (2011) Discovery of a Small Molecule Targeting IRA2 Deletion in Budding Yeast and Neurofibromin Loss in Malignant Peripheral Nerve Sheath Tumor Cells . Molecular Cancer Therapeutics 10:9, pages 1740-1750.
Crossref
Brett N Tomson, Christopher P Davis, Marcie H Warner & Karen M Arndt. (2011) Identification of a Role for Histone H2B Ubiquitylation in Noncoding RNA 3′-End Formation Through Mutational Analysis of Rtf1 in Saccharomyces cerevisiae . Genetics 188:2, pages 273-289.
Crossref
Nitish Mittal, Tanja Scherrer, André P. Gerber & Sarath Chandra Janga. (2011) Interplay between Posttranscriptional and Posttranslational Interactions of RNA-Binding Proteins. Journal of Molecular Biology 409:3, pages 466-479.
Crossref
Wiebke Wlotzka, Grzegorz Kudla, Sander Granneman & David Tollervey. (2011) The nuclear RNA polymerase II surveillance system targets polymerase III transcripts. The EMBO Journal 30:9, pages 1790-1803.
Crossref
Ki-Young Kim & David E. Levin. (2011) Mpk1 MAPK Association with the Paf1 Complex Blocks Sen1-Mediated Premature Transcription Termination. Cell 144:5, pages 745-756.
Crossref
Fruzsina Hobor, Roberto Pergoli, Karel Kubicek, Dominika Hrossova, Veronika Bacikova, Michal Zimmermann, Josef Pasulka, Ctirad Hofr, Stepanka Vanacova & Richard Stefl. (2011) Recognition of Transcription Termination Signal by the Nuclear Polyadenylated RNA-binding (NAB) 3 Protein. Journal of Biological Chemistry 286:5, pages 3645-3657.
Crossref
Aurélie Galopier & Sylvie Hermann-Le Denmat. (2011) Mitochondria of the Yeasts Saccharomyces cerevisiae and Kluyveromyces lactis Contain Nuclear rDNA-Encoded Proteins. PLoS ONE 6:1, pages e16325.
Crossref
Bradley M. Lunde, Maximilian Hörner & Anton Meinhart. (2011) Structural insights into cis element recognition of non-polyadenylated RNAs by the Nab3-RRM. Nucleic Acids Research 39:1, pages 337-346.
Crossref
Sadeq Nabavi & Ross N. Nazar. (2010) Pac1 endonuclease and Dhp1p 5′ → 3′ exonuclease are required for U3 snoRNA termination in Schizosaccharomyces pombe . FEBS Letters 584:15, pages 3436-3441.
Crossref
Sadeq Nabavi & Ross N. Nazar. (2010) Cleavage-induced termination in U2 snRNA gene expression. Biochemical and Biophysical Research Communications 393:3, pages 461-465.
Crossref
Jean-François Lemay, Annie D'Amours, Caroline Lemieux, Daniel H. Lackner, Valérie G. St-Sauveur, Jürg Bähler & François Bachand. (2010) The Nuclear Poly(A)-Binding Protein Interacts with the Exosome to Promote Synthesis of Noncoding Small Nucleolar RNAs. Molecular Cell 37:1, pages 34-45.
Crossref
Mathieu Rougemaille & Domenico Libri. 2010. RNA Exosome. RNA Exosome 122 131 .
Alain Jacquier. (2009) The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs. Nature Reviews Genetics 10:12, pages 833-844.
Crossref
Navjot Singh, Zhuo Ma, Trent Gemmill, Xiaoyun Wu, Holland DeFiglio, Anne Rossettini, Christina Rabeler, Olivia Beane, Randall H. Morse, Michael J. Palumbo & Steven D. Hanes. (2009) The Ess1 Prolyl Isomerase Is Required for Transcription Termination of Small Noncoding RNAs via the Nrd1 Pathway. Molecular Cell 36:2, pages 255-266.
Crossref
Ghada Ghazal, Jules Gagnon, Pierre-Étienne Jacques, Josette-Renée Landry, François Robert & Sherif Abou Elela. (2009) Yeast RNase III Triggers Polyadenylation-Independent Transcription Termination. Molecular Cell 36:1, pages 99-109.
Crossref
Ana G. Rondón, Hannah E. Mischo, Junya Kawauchi & Nick J. Proudfoot. (2009) Fail-Safe Transcriptional Termination for Protein-Coding Genes in S. cerevisiae. Molecular Cell 36:1, pages 88-98.
Crossref
Patricia Richard & James L. Manley. (2009) Transcription termination by nuclear RNA polymerases. Genes & Development 23:11, pages 1247-1269.
Crossref
Søren Lykke-Andersen, Ditlev E. Brodersen & Torben Heick Jensen. (2009) Origins and activities of the eukaryotic exosome. Journal of Cell Science 122:10, pages 1487-1494.
Crossref
Claudia Schneider, Eileen Leung, Jeremy Brown & David Tollervey. (2009) The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome. Nucleic Acids Research 37:4, pages 1127-1140.
Crossref
Manfred Schmid & Torben Heick Jensen. (2008) Quality control of mRNP in the nucleus. Chromosoma 117:5, pages 419-429.
Crossref
Marilyne Thiebaut, Jessie Colin, Helen Neil, Alain Jacquier, Bertrand Séraphin, François Lacroute & Domenico Libri. (2008) Futile Cycle of Transcription Initiation and Termination Modulates the Response to Nucleotide Shortage in S. cerevisiae. Molecular Cell 31:5, pages 671-682.
Crossref
Roland Becker, Bernhard Loll & Anton Meinhart. (2008) Snapshots of the RNA Processing Factor SCAF8 Bound to Different Phosphorylated Forms of the Carboxyl-terminal Domain of RNA Polymerase II. Journal of Biological Chemistry 283:33, pages 22659-22669.
Crossref
Ana G Rondon, Hannah E Mischo & Nick J Proudfoot. (2008) Terminating transcription in yeast: whether to be a 'nerd' or a 'rat'. Nature Structural & Molecular Biology 15:8, pages 775-776.
Crossref
Lidia Vasiljeva, Minkyu Kim, Hannes Mutschler, Stephen Buratowski & Anton Meinhart. (2008) The Nrd1–Nab3–Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain. Nature Structural & Molecular Biology 15:8, pages 795-804.
Crossref
Rajani Kanth Gudipati, Tommaso Villa, Jocelyne Boulay & Domenico Libri. (2008) Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice. Nature Structural & Molecular Biology 15:8, pages 786-794.
Crossref
Jason N. Kuehner & David A. Brow. (2008) Regulation of a Eukaryotic Gene by GTP-Dependent Start Site Selection and Transcription Attenuation. Molecular Cell 31:2, pages 201-211.
Crossref
Sadeq Nabavi & Ross N. Nazar. (2008) Nonpolyadenylated RNA Polymerase II Termination Is Induced by Transcript Cleavage. Journal of Biological Chemistry 283:20, pages 13601-13610.
Crossref
Stepanka Vanacova & Richard Stefl. (2007) The exosome and RNA quality control in the nucleus. EMBO reports 8:7, pages 651-657.
Crossref
Kristina L. Carroll, Rodolfo Ghirlando, Jessica M. Ames & Jeffry L. Corden. (2007) Interaction of yeast RNA-binding proteins Nrd1 and Nab3 with RNA polymerase II terminator elements. RNA 13:3, pages 361-373.
Crossref
A. Gregory Matera, Rebecca M. Terns & Michael P. Terns. (2007) Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs. Nature Reviews Molecular Cell Biology 8:3, pages 209-220.
Crossref
Minkyu Kim, Lidia Vasiljeva, Oliver J. Rando, Alexander Zhelkovsky, Claire Moore & Stephen Buratowski. (2006) Distinct Pathways for snoRNA and mRNA Termination. Molecular Cell 24:5, pages 723-734.
Crossref
Eric J. Steinmetz, Christopher L. Warren, Jason N. Kuehner, Bahman Panbehi, Aseem Z. Ansari & David A. Brow. (2006) Genome-Wide Distribution of Yeast RNA Polymerase II and Its Control by Sen1 Helicase. Molecular Cell 24:5, pages 735-746.
Crossref
Milena Preti, Elisa Guffanti, Eleonora Valitutto & Giorgio Dieci. (2006) Assembly into snoRNP controls 5′-end maturation of a box C/D snoRNA in Saccharomyces cerevisiae. Biochemical and Biophysical Research Communications 351:2, pages 468-473.
Crossref
Søren Lykke-Andersen & Torben Heick Jensen. (2006) CUT it out: silencing of noise in the transcriptome. Nature Structural & Molecular Biology 13:10, pages 860-861.
Crossref
Marilyne Thiebaut, Elena Kisseleva-Romanova, Mathieu Rougemaille, Jocelyne Boulay & Domenico Libri. (2006) Transcription Termination and Nuclear Degradation of Cryptic Unstable Transcripts: A Role for the Nrd1-Nab3 Pathway in Genome Surveillance. Molecular Cell 23:6, pages 853-864.
Crossref
John T. Arigo, Daniel E. Eyler, Kristina L. Carroll & Jeffry L. Corden. (2006) Termination of Cryptic Unstable Transcripts Is Directed by Yeast RNA-Binding Proteins Nrd1 and Nab3. Molecular Cell 23:6, pages 841-851.
Crossref
John T. Arigo, Kristina L. Carroll, Jessica M. Ames & Jeffry L. Corden. (2006) Regulation of Yeast NRD1 Expression by Premature Transcription Termination. Molecular Cell 21:5, pages 641-651.
Crossref
Lidia Vasiljeva & Stephen Buratowski. (2006) Nrd1 Interacts with the Nuclear Exosome for 3′ Processing of RNA Polymerase II Transcripts. Molecular Cell 21:2, pages 239-248.
Crossref
Kathryn E. Sheldon, David M. Mauger & Karen M. Arndt. (2005) A Requirement for the Saccharomyces cerevisiae Paf1 Complex in snoRNA 3′ End Formation. Molecular Cell 20:2, pages 225-236.
Crossref
. (2005) Current awareness on yeast. Yeast 22:1, pages 71-78.
Crossref

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