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Gene Expression

A Novel Variant of Inpp5f Is Imprinted in Brain, and Its Expression Is Correlated with Differential Methylation of an Internal CpG Island

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Pages 5514-5522 | Received 20 Jan 2005, Accepted 23 Mar 2005, Published online: 27 Mar 2023

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Teodora Ribarska, Wolfgang Goering, Johanna Droop, Klaus-Marius Bastian, Marc Ingenwerth & Wolfgang A Schulz. (2014) Deregulation of an imprinted gene network in prostate cancer. Epigenetics 9:5, pages 704-717.
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Meaghan J. Jones, Aaron B. Bogutz & Louis Lefebvre. (2011) An Extended Domain of Kcnq1ot1 Silencing Revealed by an Imprinted Fluorescent Reporter. Molecular and Cellular Biology 31:14, pages 2827-2837.
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Purnima Singh, Xiwei Wu, Dong-Hoon Lee, Arthur X. Li, Tibor A. Rauch, Gerd P. Pfeifer, Jeffrey R. Mann & Piroska E. Szabó. (2011) Chromosome-Wide Analysis of Parental Allele-Specific Chromatin and DNA Methylation . Molecular and Cellular Biology 31:8, pages 1757-1770.
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Trevelyan R. Menheniott, Kathryn Woodfine, Reiner Schulz, Andrew J. Wood, David Monk, Andrew S. Giraud, H. Scott Baldwin, Gudrun E. Moore & Rebecca J. Oakey. (2008) Genomic Imprinting of Dopa decarboxylase in Heart and Reciprocal Allelic Expression with Neighboring Grb10. Molecular and Cellular Biology 28:1, pages 386-396.
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Phillip Wyss, Carol Song & Minou Bina. (2022) Along the Bos taurus genome, uncover candidate imprinting control regions. BMC Genomics 23:1.
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Zhiyi Sun, Romualdas Vaisvila, Laura-Madison Hussong, Bo Yan, Chloé Baum, Lana Saleh, Mala Samaranayake, Shengxi Guan, Nan Dai, Ivan R. CorrêaJr.Jr., Sriharsa Pradhan, Theodore B. Davis, Thomas C. EvansJr.Jr. & Laurence M. Ettwiller. (2021) Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Genome Research 31:2, pages 291-300.
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Minou Bina. (2020) Discovering candidate imprinted genes and imprinting control regions in the human genome. BMC Genomics 21:1.
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Xiajun Li, Max Jiahua Li, Yang Yang & Yun Bai. (2019) Effects of reprogramming on genomic imprinting and the application of pluripotent stem cells. Stem Cell Research 41, pages 101655.
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Maria Oczkowicz, Tomasz Szmatoła, Katarzyna Piórkowska & Katarzyna Ropka-Molik. (2018) Variant calling from RNA-seq data of the brain transcriptome of pigs and its application for allele-specific expression and imprinting analysis. Gene 641, pages 367-375.
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Anna Lozano-Ureña, Raquel Montalbán-Loro, Anne C. Ferguson-Smith & Sacri R. Ferrón. (2017) Genomic Imprinting and the Regulation of Postnatal Neurogenesis. Brain Plasticity 3:1, pages 89-98.
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Amita Bansal & Sara E Pinney. (2017) DNA methylation and its role in the pathogenesis of diabetes. Pediatric Diabetes 18:3, pages 167-177.
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Sabrina Ruhrmann, Pernilla Stridh, Lara Kular & Maja Jagodic. (2015) Genomic imprinting: A missing piece of the Multiple Sclerosis puzzle?. The International Journal of Biochemistry & Cell Biology 67, pages 49-57.
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Vasiliki Tasiou, Michaela Hiber & Laura Steenpass. (2015) A Mouse Model for Imprinting of the Human Retinoblastoma Gene. PLOS ONE 10:8, pages e0134672.
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Daniel Andergassen, Christoph P. Dotter, Tomasz M. Kulinski, Philipp M. Guenzl, Philipp C. Bammer, Denise P. Barlow, Florian M. Pauler & Quanah J. Hudson. (2015) Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data. Nucleic Acids Research, pages gkv727.
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Julio D Perez, Nimrod D Rubinstein, Daniel E Fernandez, Stephen W Santoro, Leigh A Needleman, Olivia Ho-Shing, John J Choi, Mariela Zirlinger, Shau-Kwaun Chen, Jun S Liu & Catherine Dulac. (2015) Quantitative and functional interrogation of parent-of-origin allelic expression biases in the brain. eLife 4.
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Mark W. Logue, Alicia K. Smith, Clinton Baldwin, Erika J. Wolf, Guia Guffanti, Andrew Ratanatharathorn, Annjanette Stone, Steven A. Schichman, Donald Humphries, Elisabeth B. Binder, Janine Arloth, Andreas Menke, Monica Uddin, Derek Wildman, Sandro Galea, Allison E. Aiello, Karestan C. Koenen & Mark W. Miller. (2015) An analysis of gene expression in PTSD implicates genes involved in the glucocorticoid receptor pathway and neural responses to stress. Psychoneuroendocrinology 57, pages 1-13.
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X Wang & A G Clark. (2014) Using next-generation RNA sequencing to identify imprinted genes. Heredity 113:2, pages 156-166.
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S J Tunster, A B Jensen & R M John. (2013) Imprinted genes in mouse placental development and the regulation of fetal energy stores. REPRODUCTION 145:5, pages R117-R137.
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Lisa D Moore, Thuc Le & Guoping Fan. (2012) DNA Methylation and Its Basic Function. Neuropsychopharmacology 38:1, pages 23-38.
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Adam R. Prickett & Rebecca J. Oakey. (2012) A survey of tissue-specific genomic imprinting in mammals. Molecular Genetics and Genomics 287:8, pages 621-630.
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Teodora Ribarska, Klaus-Marius Bastian, Annemarie Koch & Wolfgang A Schulz. (2012) Specific changes in the expression of imprinted genes in prostate cancer—implications for cancer progression and epigenetic regulation. Asian Journal of Andrology 14:3, pages 436-450.
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Kathryn Woodfine, Joanna E Huddleston & Adele Murrell. (2011) Quantitative analysis of DNA methylation at all human imprinted regions reveals preservation of epigenetic stability in adult somatic tissue. Epigenetics & Chromatin 4:1.
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Shahram Golbabapour, Mahmood Ameen Abdulla & Maryam Hajrezaei. (2011) A Concise Review on Epigenetic Regulation: Insight into Molecular Mechanisms. International Journal of Molecular Sciences 12:12, pages 8661-8694.
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Xu Wang, Paul D Soloway & Andrew G Clark. (2011) A Survey for Novel Imprinted Genes in the Mouse Placenta by mRNA-seq. Genetics 189:1, pages 109-122.
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Chen Yan, He Hongjuan, Xing Yanjiang, Han Zhengbin, Li Kai, Zhang Fengwei, Hou Jing & Wu Qiong. (2011) Expression patterns of imprinted gene Inpp5f-v3 during mouse brain development. Journal of Molecular Histology 42:2, pages 167-173.
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