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Zofia Chrzanowska-Lightowlers, Joanna Rorbach & Michal Minczuk. (2017) Human mitochondrial ribosomes can switch structural tRNAs – but when and why?. RNA Biology 14:12, pages 1668-1671.
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Ruth Belostotsky, Yaacov Frishberg & Nina Entelis. (2012) Human mitochondrial tRNA quality control in health and disease. RNA Biology 9:1, pages 33-39.
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Shimyn Slomovic, Victoria Portnoy, Varda Liveanu & Gadi Schuster. (2006) RNA Polyadenylation in Prokaryotes and Organelles; Different Tails Tell Different Tales. Critical Reviews in Plant Sciences 25:1, pages 65-77.
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Articles from other publishers (122)
Laura Kienzle, Stefano Bettinazzi, Thierry Choquette, Marie Brunet, Hajar Hosseini Khorami, Jean-François Jacques, Mathilde Moreau, Xavier Roucou, Christian R. Landry, Annie Angers & Sophie Breton. (2023) A small protein coded within the mitochondrial canonical gene nd4 regulates mitochondrial bioenergetics. BMC Biology 21:1.
Crossref
Crossref
Shiwen Xu, Yuange Duan, Ling Ma, Fan Song, Li Tian, Wanzhi Cai & Hu Li. (2023) Full-Length Transcriptome Profiling of Coridius chinensis Mitochondrial Genome Reveals the Transcription of Genes with Ancestral Arrangement in Insects. Genes 14:1, pages 225.
Crossref
Crossref
Guillermo Carbajosa, Aminah T. Ali & Alan Hodgkinson. (2022) Identification of human mitochondrial RNA cleavage sites and candidate RNA processing factors. BMC Biology 20:1.
Crossref
Crossref
Kah Ying Ng, Guleycan Lutfullahoglu Bal, Uwe Richter, Omid Safronov, Lars Paulin, Cory D. Dunn, Ville O. Paavilainen, Julie RicherWilliam G. Newman, Robert W. Taylor & Brendan J. Battersby. (2022) Nonstop mRNAs generate a ground state of mitochondrial gene expression noise. Science Advances 8:46.
Crossref
Crossref
Arun Kumar De, Jai Sunder, Ramachandran Muthiyan, Sneha Sawhney, Perumal Ponraj, Eaknath Bhanudasrao Chakurkar & Debasis Bhattacharya. (2022) Andaman local goat: mitochondrial genome characterization and lineage analysis. Biologia 78:1, pages 241-253.
Crossref
Crossref
Po-Hsiang Wang, Tony Z. JiaChing-Wen ChangBertrand Chin-Ming TanYa-Hui ChiWen-Yih Chen. (2022)
Sensitive and Specific MicroRNA
In Situ
Hybridization Using Partially Methylated Phosphotriester Antisense DNA Probes
. GEN Biotechnology 1:5, pages 447-455.
Crossref
Crossref
Edmundo Torres-Gonzalez & Kateryna D. Makova. (2022) Exploring the Effects of Mitonuclear Interactions on Mitochondrial DNA Gene Expression in Humans. Frontiers in Genetics 13.
Crossref
Crossref
Isabel S. Naarmann-de Vries, Jessica Eschenbach & Christoph Dieterich. (2022) Improved nanopore direct RNA sequencing of cardiac myocyte samples by selective mt-RNA depletion. Journal of Molecular and Cellular Cardiology 163, pages 175-186.
Crossref
Crossref
Hadar Medini, Amit Zirman & Dan Mishmar. (2021) Immune system cells from COVID-19 patients display compromised mitochondrial-nuclear expression co-regulation and rewiring toward glycolysis. iScience 24:12, pages 103471.
Crossref
Crossref
Daniela Criscuolo, Rosario Avolio, Danilo Swann Matassa & Franca Esposito. (2021) Targeting Mitochondrial Protein Expression as a Future Approach for Cancer Therapy. Frontiers in Oncology 11.
Crossref
Crossref
Takashi Hirayama. (2021) PARN-like Proteins Regulate Gene Expression in Land Plant Mitochondria by Modulating mRNA Polyadenylation. International Journal of Molecular Sciences 22:19, pages 10776.
Crossref
Crossref
Nimmy Francis & Rakesh S. Laishram. (2021) Transgenesis of mammalian PABP reveals mRNA polyadenylation as a general stress response mechanism in bacteria. iScience 24:10, pages 103119.
Crossref
Crossref
Marta Jedynak-Slyvka, Agata Jabczynska & Roman J. Szczesny. (2021) Human Mitochondrial RNA Processing and Modifications: Overview. International Journal of Molecular Sciences 22:15, pages 7999.
Crossref
Crossref
Nikolay Manavski, Alexandre Vicente, Wei Chi & Jörg Meurer. (2021) The Chloroplast Epitranscriptome: Factors, Sites, Regulation, and Detection Methods. Genes 12:8, pages 1121.
Crossref
Crossref
Wilson Sebastian, Sandhya Sukumaran & A. Gopalakrishnan. (2021) The signals of selective constraints on the mitochondrial non-coding control region: insights from comparative mitogenomics of Clupeoid fishes. Genetica 149:3, pages 191-201.
Crossref
Crossref
Eva Kummer & Nenad Ban. (2021) Mechanisms and regulation of protein synthesis in mitochondria. Nature Reviews Molecular Cell Biology 22:5, pages 307-325.
Crossref
Crossref
Yael Friedman, Amnon Hizi, Dror Avni & Mary Bakhanashvili. (2021) Mitochondrial matrix-localized p53 participates in degradation of mitochondrial RNAs. Mitochondrion 58, pages 200-212.
Crossref
Crossref
Grayson C. R. Proulex, Marcus J. Meade, Kalina M. Manoylov & A. Bruce Cahoon. (2021) Mitochondrial mRNA Processing in the Chlorophyte Alga Pediastrum duplex and Streptophyte Alga Chara vulgaris Reveals an Evolutionary Branch in Mitochondrial mRNA Processing. Plants 10:3, pages 576.
Crossref
Crossref
H. Medini, T. Cohen & D. Mishmar. (2021) Mitochondrial gene expression in single cells shape pancreatic beta cells' sub-populations and explain variation in insulin pathway. Scientific Reports 11:1.
Crossref
Crossref
J. Ignacio Moreno, Ineshia S. Coleman, Classie L. Johnson, Dominique S. Green & Marta A. Piva. (2020) Ccm1p is a 15S rRNA primary transcript processing factor as elucidated by a novel in vivo system in Saccharomyces cerevisiae. Current Genetics 66:4, pages 775-789.
Crossref
Crossref
Wilson Sebastian, Sandhya Sukumaran, P. U. Zacharia, K. R. Muraleedharan, P. K. Dinesh Kumar & A. Gopalakrishnan. (2020) Signals of selection in the mitogenome provide insights into adaptation mechanisms in heterogeneous habitats in a widely distributed pelagic fish. Scientific Reports 10:1.
Crossref
Crossref
Landon G. Mance, Ishaat Mawla, Steven M. Shell & A. Bruce Cahoon. (2020) Mitochondrial mRNA fragments are circularized in a human HEK cell line. Mitochondrion 51, pages 1-6.
Crossref
Crossref
Flavia Fontanesi, Marco Tigano, Yi Fu, Agnel Sfeir & Antoni Barrientos. 2020. The Human Mitochondrial Genome. The Human Mitochondrial Genome
35
70
.
Arseny Dubin, Tor Erik Jørgensen, Lars Martin Jakt & Steinar Daae Johansen. (2019) The mitochondrial transcriptome of the anglerfish Lophius piscatorius. BMC Research Notes 12:1.
Crossref
Crossref
Hao Ma, Kyle Martin, Doug DixonIIII, Alvaro G. Hernandez & Gregory M. Weber. (2019) Transcriptome analysis of egg viability in rainbow trout, Oncorhynchus mykiss. BMC Genomics 20:1.
Crossref
Crossref
Jesse D. Pyle, Kranthi K. Mandadi & Karen-Beth G. Scholthof. (2019)
Panicum Mosaic Virus
and Its Satellites Acquire RNA Modifications Associated with Host-Mediated Antiviral Degradation
. mBio 10:4.
Crossref
Crossref
Mehul A. Sharma, Ja Young J. Lee, Andrea Tam, Beheroze Sattha, Ian R. Mackenzie, Hilary D. Vallance, Sandra Sirrs, Fady Hannah-Shmouni, Hélène C.F. Côté & Andre Mattman. (2019) A mitochondrial DNA D loop insertion detected almost exclusively in non-replicating tissues with maternal inheritance across three generations. Mitochondrion 46, pages 298-301.
Crossref
Crossref
Zhu Zhuo, Susan J. Lamont & Behnam Abasht. (2019) RNA-Seq Analyses Identify Additivity as the Predominant Gene Expression Pattern in F1 Chicken Embryonic Brain and Liver. Genes 10:1, pages 27.
Crossref
Crossref
Eliane Hajnsdorf & Vladimir R. Kaberdin. (2018) RNA polyadenylation and its consequences in prokaryotes. Philosophical Transactions of the Royal Society B: Biological Sciences 373:1762, pages 20180166.
Crossref
Crossref
Tor Erik Jørgensen & Steinar Daae Johansen. 2018. Mitochondrial DNA - New Insights. Mitochondrial DNA - New Insights.
Jessica Silver, Glenn Wadley & Séverine Lamon. (2018) Mitochondrial regulation in skeletal muscle: A role for non‐coding RNAs?. Experimental Physiology 103:8, pages 1132-1144.
Crossref
Crossref
Marina Toompuu, Tea Tuomela, Pia Laine, Lars Paulin, Eric Dufour & Howard T Jacobs. (2018) Polyadenylation and degradation of structurally abnormal mitochondrial tRNAs in human cells. Nucleic Acids Research 46:10, pages 5209-5226.
Crossref
Crossref
Morgane Boone, Andries De Koker & Nico Callewaert. (2018) Capturing the ‘ome’: the expanding molecular toolbox for RNA and DNA library construction. Nucleic Acids Research 46:6, pages 2701-2721.
Crossref
Crossref
Gaurav G. Shimpi, Sergio Vargas, Angelo Poliseno & Gert Wörheide. (2017) Mitochondrial RNA processing in absence of tRNA punctuations in octocorals. BMC Molecular Biology 18:1.
Crossref
Crossref
Yao Sun, Masaki Kurisaki, Yasuyuki Hashiguchi & Yoshinori Kumazawa. (2017) Variation and evolution of polyadenylation profiles in sauropsid mitochondrial mRNAs as deduced from the high-throughput RNA sequencing. BMC Genomics 18:1.
Crossref
Crossref
Ilaria Dalla Rosa, Hongliang Zhang, Salim Khiati, Xiaolin Wu & Yves Pommier. (2017) Transcription profiling suggests that mitochondrial topoisomerase IB acts as a topological barrier and regulator of mitochondrial DNA transcription. Journal of Biological Chemistry 292:49, pages 20162-20172.
Crossref
Crossref
Xiaoyu Li, Xushen Xiong, Meiling Zhang, Kun Wang, Ying Chen, Jun Zhou, Yuanhui Mao, Jia Lv, Danyang Yi, Xiao-Wei Chen, Chu Wang, Shu-Bing Qian & Chengqi Yi. (2017) Base-Resolution Mapping Reveals Distinct m1A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts. Molecular Cell 68:5, pages 993-1005.e9.
Crossref
Crossref
Stefan J. Siira, Anne-Marie J. Shearwood, Cameron P. Bracken, Oliver Rackham & Aleksandra Filipovska. (2017) Defects in RNA metabolism in mitochondrial disease. The International Journal of Biochemistry & Cell Biology 85, pages 106-113.
Crossref
Crossref
Chengfu Yuan, Yaping Han, Lucas Zellmer, Wenxiu Yang, Zhizhong Guan, Wenfeng Yu, Hai Huang & D. Liao. (2017) It Is Imperative to Establish a Pellucid Definition of Chimeric RNA and to Clear Up a Lot of Confusion in the Relevant Research. International Journal of Molecular Sciences 18:4, pages 714.
Crossref
Crossref
Nicole Mai, Zofia M. A. Chrzanowska-Lightowlers & Robert N. Lightowlers. (2016) The process of mammalian mitochondrial protein synthesis. Cell and Tissue Research 367:1, pages 5-20.
Crossref
Crossref
Shiri Levy & Gadi Schuster. (2016) Polyadenylation and degradation of RNA in the mitochondria. Biochemical Society Transactions 44:5, pages 1475-1482.
Crossref
Crossref
M.I.G. Lopez Sanchez, J.G. Crowston, D.A. Mackey & I.A. Trounce. (2016) Emerging Mitochondrial Therapeutic Targets in Optic Neuropathies. Pharmacology & Therapeutics 165, pages 132-152.
Crossref
Crossref
Ana Bratic, Paula Clemente, Javier Calvo-Garrido, Camilla Maffezzini, Andrea Felser, Rolf Wibom, Anna Wedell, Christoph Freyer & Anna Wredenberg. (2016) Mitochondrial Polyadenylation Is a One-Step Process Required for mRNA Integrity and tRNA Maturation. PLOS Genetics 12:5, pages e1006028.
Crossref
Crossref
Bingkun Xie, Wei Yang, Yongchang Ouyang, Lichan Chen, Hesheng Jiang, Yuying Liao & D. Joshua Liao. (2016) Two RNAs or DNAs May Artificially Fuse Together at a Short Homologous Sequence (SHS) during Reverse Transcription or Polymerase Chain Reactions, and Thus Reporting an SHS-Containing Chimeric RNA Requires Extra Caution. PLOS ONE 11:5, pages e0154855.
Crossref
Crossref
Heather A. Feaga, Michael D. Quickel, Pamela A. Hankey-Giblin & Kenneth C. Keiler. (2016) Human Cells Require Non-stop Ribosome Rescue Activity in Mitochondria. PLOS Genetics 12:3, pages e1005964.
Crossref
Crossref
Shiri Levy, Charles K. Allerston, Varda Liveanu, Mouna R. Habib, Opher Gileadi & Gadi Schuster. (2016) Identification of LACTB2, a metallo-β-lactamase protein, as a human mitochondrial endoribonuclease. Nucleic Acids Research 44:4, pages 1813-1832.
Crossref
Crossref
Ioana Minoiu, Artur Burzyński & Sophie Breton. (2016) Analysis of the coding potential of the ORF in the control region of the female-transmitted Mytilus mtDNA. Gene 576:1, pages 586-588.
Crossref
Crossref
Aldo E. García-Guerrero, Angélica Zamudio-Ochoa, Yolanda Camacho-Villasana, Rodolfo García-Villegas, Adrián Reyes-Prieto & Xochitl Pérez-Martínez. 2016. Evolution of the Protein Synthesis Machinery and Its Regulation. Evolution of the Protein Synthesis Machinery and Its Regulation
109
142
.
Silvia Marková, Karolína Filipi, Jeremy B. Searle & Petr Kotlík. (2015) Mapping 3′ transcript ends in the bank vole (Clethrionomys glareolus) mitochondrial genome with RNA-Seq. BMC Genomics 16:1.
Crossref
Crossref
Yi-Jyun Luo, Noriyuki Satoh & Kazuyoshi Endo. (2015) Mitochondrial gene order variation in the brachiopod Lingula anatina and its implications for mitochondrial evolution in lophotrochozoans. Marine Genomics 24, pages 31-40.
Crossref
Crossref
Saya Okui, Chisato Ushida, Hidenori Kiyosawa & Gota Kawai. (2015) Sequence and structure analysis of a mirror tRNA located upstream of the cytochrome oxidase I mRNA in mouse mitochondria. Journal of Biochemistry, pages mvv106.
Crossref
Crossref
Mikalai Lapkouski & B. Martin Hällberg. (2015) Structure of mitochondrial poly(A) RNA polymerase reveals the structural basis for dimerization, ATP selectivity and the SPAX4 disease phenotype. Nucleic Acids Research 43:18, pages 9065-9075.
Crossref
Crossref
Mario Fiedler, Walter Rossmanith, Elmar Wahle & Christiane Rammelt. (2015) Mitochondrial poly(A) polymerase is involved in tRNA repair. Nucleic Acids Research, pages gkv891.
Crossref
Crossref
Paula Clemente, Aleksandra Pajak, Isabelle Laine, Rolf Wibom, Anna Wedell, Christoph Freyer & Anna Wredenberg. (2015) SUV3 helicase is required for correct processing of mitochondrial transcripts. Nucleic Acids Research 43:15, pages 7398-7413.
Crossref
Crossref
Lindsey Van Haute, Sarah F. Pearce, Christopher A. Powell, Aaron R. D’Souza, Thomas J. Nicholls & Michal Minczuk. (2015) Mitochondrial transcript maturation and its disorders. Journal of Inherited Metabolic Disease 38:4, pages 655-680.
Crossref
Crossref
Chris L Dupont, John P McCrow, Ruben Valas, Ahmed Moustafa, Nathan Walworth, Ursula Goodenough, Robyn Roth, Shane L Hogle, Jing Bai, Zackary I Johnson, Elizabeth Mann, Brian Palenik, Katherine A Barbeau, J Craig Venter & Andrew E Allen. (2014) Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities. The ISME Journal 9:5, pages 1076-1092.
Crossref
Crossref
Alexis A. Jourdain, Mirko Koppen, Christopher D. Rodley, Kinsey Maundrell, Naïg Gueguen, Pascal Reynier, Adela M. Guaras, José A. Enriquez, Paul Anderson, Maria Simarro & Jean-Claude Martinou. (2015) A Mitochondria-Specific Isoform of FASTK Is Present In Mitochondrial RNA Granules and Regulates Gene Expression and Function. Cell Reports 10:7, pages 1110-1121.
Crossref
Crossref
Paola Munoz-Tello, Lional Rajappa, Sandrine Coquille & Stéphane Thore. (2015) Polyuridylation in Eukaryotes: A 3′-End Modification Regulating RNA Life. BioMed Research International 2015, pages 1-12.
Crossref
Crossref
Stefanie Dukowic-Schulze, Anitha Sundararajan, Joann Mudge, Thiruvarangan Ramaraj, Andrew D Farmer, Minghui Wang, Qi Sun, Jaroslaw Pillardy, Shahryar Kianian, Ernest F Retzel, Wojciech P Pawlowski & Changbin Chen. (2014) The transcriptome landscape of early maize meiosis. BMC Plant Biology 14:1.
Crossref
Crossref
Gang Wang, Ence Yang, Ishita Mandhan, Candice L Brinkmeyer-Langford & James J Cai. (2014) Population-level expression variability of mitochondrial DNA-encoded genes in humans. European Journal of Human Genetics 22:9, pages 1093-1099.
Crossref
Crossref
Eleni Kyriakou, Evanthia Chatzoglou, George C. Rodakis & Eleftherios Zouros. (2014) Does the ORF in the control region of Mytilus mtDNA code for a protein product?. Gene 546:2, pages 448-450.
Crossref
Crossref
Dennis Ding-Hwa Wang, Xuning Emily Guo, Aram Sandaldjian Modrek, Chi-Fen Chen, Phang-Lang Chen & Wen-Hwa Lee. (2014) Helicase SUV3, Polynucleotide Phosphorylase, and Mitochondrial Polyadenylation Polymerase Form a Transient Complex to Modulate Mitochondrial mRNA Polyadenylated Tail Lengths in Response to Energetic Changes. Journal of Biological Chemistry 289:24, pages 16727-16735.
Crossref
Crossref
Eleni Kyriakou, Evanthia Chatzoglou, Eleftherios Zouros & George C. Rodakis. (2014) The rRNA and tRNA transcripts of maternally and paternally inherited mitochondrial DNAs of Mytilus galloprovincialis suggest presence of a “degradosome” in mussel mitochondria and necessitate the re-annotation of the l-rRNA/CR boundary. Gene 540:1, pages 78-85.
Crossref
Crossref
Joanna Rorbach, Agnieszka Bobrowicz, Sarah Pearce & Michal Minczuk. 2014. Polyadenylation. Polyadenylation
211
227
.
Andrei Nikonov, Tarmo Mölder, Rein Sikut, Kaja Kiiver, Andres Männik, Urve Toots, Aleksei Lulla, Valeria Lulla, Age Utt, Andres Merits & Mart Ustav. (2013) RIG-I and MDA-5 Detection of Viral RNA-dependent RNA Polymerase Activity Restricts Positive-Strand RNA Virus Replication. PLoS Pathogens 9:9, pages e1003610.
Crossref
Crossref
S. Bandiera, R. Matégot, M. Girard, J. Demongeot & A. Henrion-Caude. (2013) MitomiRs delineating the intracellular localization of microRNAs at mitochondria. Free Radical Biology and Medicine 64, pages 12-19.
Crossref
Crossref
Lutz Wobbe & Peter J. Nixon. (2013) The mTERF protein MOC1 terminates mitochondrial DNA transcription in the unicellular green alga Chlamydomonas reinhardtii. Nucleic Acids Research 41:13, pages 6553-6567.
Crossref
Crossref
Evanthia Chatzoglou, Eleni Kyriakou, Eleftherios Zouros & George C. Rodakis. (2013) The mRNAs of maternally and paternally inherited mtDNAs of the mussel Mytilus galloprovincialis: Start/end points and polycistronic transcripts. Gene 520:2, pages 156-165.
Crossref
Crossref
Hana Antonicka, Florin Sasarman, Tamiko Nishimura, Vincent Paupe & Eric A. Shoubridge. (2013) The Mitochondrial RNA-Binding Protein GRSF1 Localizes to RNA Granules and Is Required for Posttranscriptional Mitochondrial Gene Expression. Cell Metabolism 17:3, pages 386-398.
Crossref
Crossref
Eleonora de Klerk, Andrea Venema, S. Yahya Anvar, Jelle J. Goeman, OuHua Hu, Capucine Trollet, George Dickson, Johan T. den Dunnen, Silvère M. van der Maarel, Vered Raz & Peter A. C. ‘t Hoen. (2012) Poly(A) binding protein nuclear 1 levels affect alternative polyadenylation. Nucleic Acids Research 40:18, pages 9089-9101.
Crossref
Crossref
Takeshi Chujo, Takayuki Ohira, Yuriko Sakaguchi, Naoki Goshima, Nobuo Nomura, Asuteka Nagao & Tsutomu Suzuki. (2012) LRPPRC/SLIRP suppresses PNPase-mediated mRNA decay and promotes polyadenylation in human mitochondria. Nucleic Acids Research 40:16, pages 8033-8047.
Crossref
Crossref
Roman J. Szczesny, Lukasz S. Borowski, Michal Malecki, Magdalena A. Wojcik, Piotr P. Stepien & Pawel Golik. (2012) RNA Degradation in Yeast and Human Mitochondria. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819:9-10, pages 1027-1034.
Crossref
Crossref
Jeong Ho Chang & Liang Tong. (2012) Mitochondrial poly(A) polymerase and polyadenylation. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819:9-10, pages 992-997.
Crossref
Crossref
Geng Wang, Eriko Shimada, Carla M. Koehler & Michael A. Teitell. (2012) PNPASE and RNA trafficking into mitochondria. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1819:9-10, pages 998-1007.
Crossref
Crossref
Oliver Rackham, Timothy R. Mercer & Aleksandra Filipovska. (2012) The human mitochondrial transcriptome and the RNA-binding proteins that regulate its expression. Wiley Interdisciplinary Reviews: RNA 3:5, pages 675-695.
Crossref
Crossref
Igor Y. MorozovMark X. Caddick. (2012) Cytoplasmic mRNA 3′ tagging in eukaryotes: does it spell the end?. Biochemical Society Transactions 40:4, pages 810-814.
Crossref
Crossref
Joanna RorbachMichal Minczuk. (2012) The post-transcriptional life of mammalian mitochondrial RNA. Biochemical Journal 444:3, pages 357-373.
Crossref
Crossref
Christian Barth, Luke A. Kennedy & Paul R. Fisher. 2012. Organelle Genetics. Organelle Genetics
241
269
.
Jordi Durban, Paula Juárez, Yamileth Angulo, Bruno Lomonte, Marietta Flores-Diaz, Alberto Alape-Girón, Mahmood Sasa, Libia Sanz, José M Gutiérrez, Joaquín Dopazo, Ana Conesa & Juan J Calvete. (2011) Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing. BMC Genomics 12:1.
Crossref
Crossref
Marshall Hampton, Richard G. Melvin, Anne H. Kendall, Brian R. Kirkpatrick, Nichole Peterson & Matthew T. Andrews. (2011) Deep Sequencing the Transcriptome Reveals Seasonal Adaptive Mechanisms in a Hibernating Mammal. PLoS ONE 6:10, pages e27021.
Crossref
Crossref
Joanna Rorbach, Thomas J. J. Nicholls & Michal Minczuk. (2011) PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria. Nucleic Acids Research 39:17, pages 7750-7763.
Crossref
Crossref
Tim R. Mercer, Shane Neph, Marcel E. Dinger, Joanna Crawford, Martin A. Smith, Anne-Marie J. Shearwood, Eric Haugen, Cameron P. Bracken, Oliver Rackham, John A. Stamatoyannopoulos, Aleksandra Filipovska & John S. Mattick. (2011) The Human Mitochondrial Transcriptome. Cell 146:4, pages 645-658.
Crossref
Crossref
Dag H. Coucheron, Marianne Nymark, Ragna Breines, Bård Ove Karlsen, Morten Andreassen, Tor Erik Jørgensen, Truls Moum & Steinar D. Johansen. (2011) Characterization of mitochondrial mRNAs in codfish reveals unique features compared to mammals. Current Genetics 57:3, pages 213-222.
Crossref
Crossref
Jesper Buchhave Poulsen, Kasper Røjkjær Andersen, Karina Hansen Kjær, Fiona Durand, Pierre Faou, Anna Lindeløv Vestergaard, Gert Hoy Talbo, Nick Hoogenraad, Ditlev Egeskov Brodersen, Just Justesen & Pia Møller Martensen. (2011) Human 2′-phosphodiesterase localizes to the mitochondrial matrix with a putative function in mitochondrial RNA turnover. Nucleic Acids Research 39:9, pages 3754-3770.
Crossref
Crossref
Sophie Breton, Fabrizio Ghiselli, Marco Passamonti, Liliana Milani, Donald T. Stewart & Walter R. Hoeh. (2011) Evidence for a Fourteenth mtDNA-Encoded Protein in the Female-Transmitted mtDNA of Marine Mussels (Bivalvia: Mytilidae). PLoS ONE 6:4, pages e19365.
Crossref
Crossref
S K Das, S K Bhutia, U K Sokhi, R Dash, B Azab, D Sarkar & P B Fisher. (2010) Human polynucleotide phosphorylase (hPNPaseold-35): an evolutionary conserved gene with an expanding repertoire of RNA degradation functions. Oncogene 30:15, pages 1733-1743.
Crossref
Crossref
Peter J. Shepard, Eun-A Choi, Jente Lu, Lisa A. Flanagan, Klemens J. Hertel & Yongsheng Shi. (2011) Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq. RNA 17:4, pages 761-772.
Crossref
Crossref
Robert E. Sharwood, Amber M. Hotto, Thomas J. Bollenbach & David B. Stern. (2011) Overaccumulation of the chloroplast antisense RNA AS5 is correlated with decreased abundance of 5S rRNA in vivo and inefficient 5S rRNA maturation in vitro. RNA 17:2, pages 230-243.
Crossref
Crossref
Heike Lange & Dominique Gagliardi. 2011. Non Coding RNAs in Plants. Non Coding RNAs in Plants
209
225
.
Shimyn Slomovic & Gadi Schuster. (2011) Exonucleases and endonucleases involved in polyadenylation- assisted RNA decay. Wiley Interdisciplinary Reviews: RNA 2:1, pages 106-123.
Crossref
Crossref
Cecília M. Arraiano, José M. Andrade, Susana Domingues, Inês B. Guinote, Michal Malecki, Rute G. Matos, Ricardo N. Moreira, Vânia Pobre, Filipa P. Reis, Margarida Saramago, Inês J. Silva & Sandra C. Viegas. (2010) The critical role of RNA processing and degradation in the control of gene expression. FEMS Microbiology Reviews 34:5, pages 883-923.
Crossref
Crossref
Marie‐Joëlle Schmidt & Chris J. Norbury. (2010) Polyadenylation and beyond: emerging roles for noncanonical poly(A) polymerases. Wiley Interdisciplinary Reviews: RNA 1:1, pages 142-151.
Crossref
Crossref
N. E. Gubina, O. S. Merekina & T. E. Ushakova. (2010) Mitochondrial DNA transcription in mouse liver, skeletal muscle, and brain following lethal X-ray irradiation. Biochemistry (Moscow) 75:6, pages 777-783.
Crossref
Crossref
Richard J. Temperley, Mateusz Wydro, Robert N. Lightowlers & Zofia M. Chrzanowska-Lightowlers. (2010) Human mitochondrial mRNAs—like members of all families, similar but different. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1797:6-7, pages 1081-1085.
Crossref
Crossref
Jason P. Curole, Eli Meyer, Donal T. Manahan & Dennis Hedgecock. (2010)
Unequal and Genotype-Dependent Expression of Mitochondrial Genes in Larvae of the Pacific Oyster
Crassostrea gigas
. The Biological Bulletin 218:2, pages 122-131.
Crossref
Crossref
Roman J. Szczesny, Lukasz S. Borowski, Lien K. Brzezniak, Aleksandra Dmochowska, Kamil Gewartowski, Ewa Bartnik & Piotr P. Stepien. (2010) Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance. Nucleic Acids Research 38:1, pages 279-298.
Crossref
Crossref
Timothy E. Shutt & Gerald S. Shadel. (2010) A compendium of human mitochondrial gene expression machinery with links to disease. Environmental and Molecular Mutagenesis, pages NA-NA.
Crossref
Crossref
Jason W. Abernathy, De-Hai Xu, Ping Li, Phillip Klesius, Huseyin Kucuktas & Zhanjiang Liu. (2009) Transcriptomic profiling of Ichthyophthirius multifiliis reveals polyadenylation of the large subunit ribosomal RNA. Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 4:3, pages 179-186.
Crossref
Crossref
Sarah L. Zimmer, Aleks Schein, Gadi Zipor, David B. Stern & Gadi Schuster. (2009)
Polyadenylation in Arabidopsis and
Chlamydomonas
organelles: the input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase
. The Plant Journal 59:1, pages 88-99.
Crossref
Crossref
Dennis Ding-Hwa Wang, Zhanyong Shu, Scot A. Lieser, Phang-Lang Chen & Wen-Hwa Lee. (2009) Human Mitochondrial SUV3 and Polynucleotide Phosphorylase Form a 330-kDa Heteropentamer to Cooperatively Degrade Double-stranded RNA with a 3′-to-5′ Directionality. Journal of Biological Chemistry 284:31, pages 20812-20821.
Crossref
Crossref
Yeon J. Lee & Britt A. Glaunsinger. (2009) Aberrant Herpesvirus-Induced Polyadenylation Correlates With Cellular Messenger RNA Destruction. PLoS Biology 7:5, pages e1000107.
Crossref
Crossref
Felisa Wolfe-Simon, Paul C.W. Davies & Ariel D. Anbar. (2009) Did nature also choose arsenic?. International Journal of Astrobiology 8:2, pages 69-74.
Crossref
Crossref
Gadi Schuster & David Stern. 2009. Molecular Biology of RNA Processing and Decay in Prokaryotes. Molecular Biology of RNA Processing and Decay in Prokaryotes
393
422
.
Alena Čížková, Viktor Stránecký, Robert Ivánek, Hana Hartmannová, Lenka Nosková, Lenka Piherová, Markéta Tesařová, Hana Hansíková, Tomáš Honzík, Jiří Zeman, Petr Divina, Andrea Potocká, Jan Paul, Wolfgang Sperl, Johannes A Mayr, Sara Seneca, Josef Houštĕk & Stanislav Kmoch. (2008) Development of a human mitochondrial oligonucleotide microarray (h-MitoArray) and gene expression analysis of fibroblast cell lines from 13 patients with isolated F1Fo ATP synthase deficiency. BMC Genomics 9:1.
Crossref
Crossref
Timothy A. Brown, Ariana N. Tkachuk & David A. Clayton. (2008) Native R-loops Persist throughout the Mouse Mitochondrial DNA Genome. Journal of Biological Chemistry 283:52, pages 36743-36751.
Crossref
Crossref
Lily Khidr, Guikai Wu, Antonio Davila, Vincent Procaccio, Douglas Wallace & Wen-Hwa Lee. (2008) Role of SUV3 Helicase in Maintaining Mitochondrial Homeostasis in Human Cells. Journal of Biological Chemistry 283:40, pages 27064-27073.
Crossref
Crossref
Agnieszka J. BobrowiczRobert N. LightowlersZofia Chrzanowska-Lightowlers. (2008) Polyadenylation and degradation of mRNA in mammalian mitochondria: a missing link?. Biochemical Society Transactions 36:3, pages 517-519.
Crossref
Crossref
Sara L Zimmer, Zhangjun Fei & David B Stern. (2008)
Genome-Based Analysis of
Chlamydomonas reinhardtii
Exoribonucleases and Poly(A) Polymerases Predicts Unexpected Organellar and Exosomal Features
. Genetics 179:1, pages 125-136.
Crossref
Crossref
Takashi Nagaike, Tsutomu Suzuki & Takuya Ueda. (2008) Polyadenylation in mammalian mitochondria: Insights from recent studies. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1779:4, pages 266-269.
Crossref
Crossref
Victoria Portnoy, Gili Palnizky, Shlomit Yehudai-Resheff, Fabian Glaser & Gadi Schuster. (2008) Analysis of the human polynucleotide phosphorylase (PNPase) reveals differences in RNA binding and response to phosphate compared to its bacterial and chloroplast counterparts. RNA 14:2, pages 297-309.
Crossref
Crossref
Shimyn Slomovic & Gadi Schuster. (2008) Stable PNPase RNAi silencing: Its effect on the processing and adenylation of human mitochondrial RNA. RNA 14:2, pages 310-323.
Crossref
Crossref
Carol J. Wilusz & Jeffrey Wilusz. (2008) New ways to meet your (3′) end—oligouridylation as a step on the path to destruction. Genes & Development 22:1, pages 1-7.
Crossref
Crossref
Shimyn Slomovic, Victoria Portnoy & Gadi Schuster. 2008. RNA Turnover in Bacteria, Archaea and Organelles. RNA Turnover in Bacteria, Archaea and Organelles
501
520
.
Sarah Holec, Heike Lange, André Dietrich & Dominique Gagliardi. 2008. RNA Turnover in Bacteria, Archaea and Organelles. RNA Turnover in Bacteria, Archaea and Organelles
439
461
.
Christopher J Jackson, John E Norman, Murray N Schnare, Michael W Gray, Patrick J Keeling & Ross F Waller. (2007) Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria. BMC Biology 5:1.
Crossref
Crossref
Karsten Scheibye-Alsing, Susanna Cirera, Michael J Gilchrist, Merete Fredholm & Jan Gorodkin. (2007) EST analysis on pig mitochondria reveal novel expression differences between developmental and adult tissues. BMC Genomics 8:1.
Crossref
Crossref
Hsiao-Wen Chen, Carla M. Koehler & Michael A. Teitell. (2007) Human polynucleotide phosphorylase: location matters. Trends in Cell Biology 17:12, pages 600-608.
Crossref
Crossref
Thomas J. Bollenbach, Gadi Schuster, Victoria Portnoy & David B. Stern. 2007. Cell and Molecular Biology of Plastids. Cell and Molecular Biology of Plastids
175
211
.
Victoria Portnoy & Gadi Schuster. (2006) RNA polyadenylation and degradation in different Archaea; roles of the exosome and RNase R. Nucleic Acids Research 34:20, pages 5923-5931.
Crossref
Crossref
Birgit Lung, Anja Zemann, Monika J. Madej, Markus Schuelke, Sandra Techritz, Stephanie Ruf, Ralph Bock & Alexander Hüttenhofer. (2006) Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Research 34:14, pages 3842-3852.
Crossref
Crossref
Julio Montoya, Manuel J. López-Pérez & Eduardo Ruiz-Pesini. (2006) Mitochondrial DNA transcription and diseases: Past, present and future. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1757:9-10, pages 1179-1189.
Crossref
Crossref
Victoria Portnoy, Elena Evguenieva‐Hackenberg, Franziska Klein, Pamela Walter, Esben Lorentzen, Gabriele Klug & Gadi Schuster. (2005)
RNA polyadenylation in Archaea: not observed in
Haloferax
while the exosome polynucleotidylates RNA in
Sulfolobus
. EMBO reports 6:12, pages 1188-1193.
Crossref
Crossref