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Molecular and Cellular Biology Volume 25, 2005 - Issue 9
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Gene Expression

Identification In Vivo of Different Rate-Limiting Steps Associated with Transcriptional Activators in the Presence and Absence of a GAGA Element

Yunyuan Vivian WangCenter for Gene Regulation, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania
,
Hongbing TangCenter for Gene Regulation, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania
&
David S. GilmourCenter for Gene Regulation, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PennsylvaniaCorrespondence[email protected]
Pages 3543-3552 | Received 09 Jan 2005, Accepted 19 Jan 2005, Published online: 27 Mar 2023

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Alvaro Valin & Grace Gill. (2013) Enforcing the pause: Transcription factor Sp3 limits productive elongation by RNA polymerase II. Cell Cycle 12:12, pages 1828-1834.
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Alec M. DeSimone & Jeffrey D. Laney. (2010) Corepressor-Directed Preacetylation of Histone H3 in Promoter Chromatin Primes Rapid Transcriptional Switching of Cell-Type-Specific Genes in Yeast. Molecular and Cellular Biology 30:13, pages 3342-3356.
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Chanhyo Lee, Xiaoyong Li, Aaron Hechmer, Michael Eisen, Mark D. Biggin, Bryan J. Venters, Cizhong Jiang, Jian Li, B. Franklin Pugh & David S. Gilmour. (2008) NELF and GAGA Factor Are Linked to Promoter-Proximal Pausing at Many Genes in Drosophila. Molecular and Cellular Biology 28:10, pages 3290-3300.
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Articles from other publishers (16)

Roberta Dollinger & David S. Gilmour. (2021) Regulation of Promoter Proximal Pausing of RNA Polymerase II in Metazoans. Journal of Molecular Biology 433:14, pages 166897.
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Darya Chetverina, Maksim Erokhin & Paul Schedl. (2021) GAGA factor: a multifunctional pioneering chromatin protein. Cellular and Molecular Life Sciences 78:9, pages 4125-4141.
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Nicholas J. Fuda, Michael J. Guertin, Sumeet Sharma, Charles G. Danko, André L. Martins, Adam Siepel & John T. Lis. (2015) GAGA Factor Maintains Nucleosome-Free Regions and Has a Role in RNA Polymerase II Recruitment to Promoters. PLOS Genetics 11:3, pages e1005108.
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Lyubov N. Astakhova, Olga G. Zatsepina, Sergei Yu. Funikov, Elena S. Zelentsova, Natalia G. Schostak, Konstantin E. Orishchenko, Michael B. Evgen’ev & David G. Garbuz. (2015) Activity of Heat Shock Genes’ Promoters in Thermally Contrasting Animal Species. PLOS ONE 10:2, pages e0115536.
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Hojoong KwakJohn T. Lis. (2013) Control of Transcriptional Elongation. Annual Review of Genetics 47:1, pages 483-508.
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David Piñeyro, Marta Blanch, Martí Badal, Ana Kosoy & Jordi Bernués. (2013) GAGA factor repression of transcription is a rare event but the negative regulation of Trl is conserved in Drosophila species. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1829:10, pages 1056-1065.
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Eulàlia de Nadal, Gustav Ammerer & Francesc Posas. (2011) Controlling gene expression in response to stress. Nature Reviews Genetics 12:12, pages 833-845.
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Vikki M. Weake & Jerry L. Workman. (2010) Inducible gene expression: diverse regulatory mechanisms. Nature Reviews Genetics 11:6, pages 426-437.
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Julia Zeitlinger & Alexander Stark. (2010) Developmental gene regulation in the era of genomics. Developmental Biology 339:2, pages 230-239.
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Nicholas J. Fuda, M. Behfar Ardehali & John T. Lis. (2009) Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 461:7261, pages 186-192.
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David S. Gilmour & Ruopeng Fan. (2009) Detecting transcriptionally engaged RNA polymerase in eukaryotic cells with permanganate genomic footprinting. Methods 48:4, pages 368-374.
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David S. Gilmour. (2008) Promoter proximal pausing on genes in metazoans. Chromosoma 118:1, pages 1-10.
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David A. HendrixJoung-Woo HongJulia Zeitlinger, Daniel S. Rokhsar & Michael S. Levine. (2008) Promoter elements associated with RNA Pol II stalling in the Drosophila embryo . Proceedings of the National Academy of Sciences 105:22, pages 7762-7767.
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Zong-Xiang TangShu-Lan FuZheng-Long RenJian-Ping ZhouBen-Ju YanHuai-Qiong Zhang. (2008) Variations of tandem repeat, regulatory element, and promoter regions revealed by wheat–rye amphiploids. Genome 51:6, pages 399-408.
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Leighton J. CoreJohn T. Lis. (2008) Transcription Regulation Through Promoter-Proximal Pausing of RNA Polymerase II. Science 319:5871, pages 1791-1792.
Crossref
John T. Lis. (2007) Imaging Drosophila gene activation and polymerase pausing in vivo. Nature 450:7167, pages 198-202.
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