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Article

Genome-Wide Relationships between TAF1 and Histone Acetyltransferases in Saccharomyces cerevisiae

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Pages 2791-2802 | Received 09 Nov 2005, Accepted 10 Jan 2006, Published online: 27 Mar 2023

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María E. Pérez-Martínez, Marta Benet, Paula Alepuz & Vicente Tordera. (2020) Nut1/Hos1 and Sas2/Rpd3 control the H3 acetylation of two different sets of osmotic stress-induced genes. Epigenetics 15:3, pages 251-271.
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Daniel S. Ginsburg, Chhabi K. Govind & Alan G. Hinnebusch. (2009) NuA4 Lysine Acetyltransferase Esa1 Is Targeted to Coding Regions and Stimulates Transcription Elongation with Gcn5. Molecular and Cellular Biology 29:24, pages 6473-6487.
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Leslie Mitchell, Jean-Philippe Lambert, Maria Gerdes, Ashraf S. Al-Madhoun, Ilona S. Skerjanc, Daniel Figeys & Kristin Baetz. (2008) Functional Dissection of the NuA4 Histone Acetyltransferase Reveals Its Role as a Genetic Hub and that Eaf1 Is Essential for Complex Integrity. Molecular and Cellular Biology 28:7, pages 2244-2256.
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Melissa Durant & B. Franklin Pugh. (2007) NuA4-Directed Chromatin Transactions throughout the Saccharomyces cerevisiae Genome. Molecular and Cellular Biology 27:15, pages 5327-5335.
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Krassimira A. Garbett, Manish K. Tripathi, Belgin Cencki, Justin H. Layer & P. Anthony Weil. (2007) Yeast TFIID Serves as a Coactivator for Rap1p by Direct Protein-Protein Interaction. Molecular and Cellular Biology 27:1, pages 297-311.
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Sevil Zencir, Daniel Dilg, David Shore & Benjamin Albert. (2022) Pitfalls in using phenanthroline to study the causal relationship between promoter nucleosome acetylation and transcription. Nature Communications 13:1.
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Paul B. TalbertSteven Henikoff. (2021) The Yin and Yang of Histone Marks in Transcription. Annual Review of Genomics and Human Genetics 22:1, pages 147-170.
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Xue Cheng, Valérie Côté & Jacques Côté. (2021) NuA4 and SAGA acetyltransferase complexes cooperate for repair of DNA breaks by homologous recombination. PLOS Genetics 17:7, pages e1009459.
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Benjamin J. E. Martin, Julie Brind’Amour, Anastasia Kuzmin, Kristoffer N. Jensen, Zhen Cheng Liu, Matthew Lorincz & LeAnn J. Howe. (2021) Transcription shapes genome-wide histone acetylation patterns. Nature Communications 12:1.
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Abu Salah Ud-Din, Alexandra Tikhomirova & Anna Roujeinikova. (2016) Structure and Functional Diversity of GCN5-Related N-Acetyltransferases (GNAT). International Journal of Molecular Sciences 17:7, pages 1018.
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Sara Vicente-Muñoz, Paco Romero, Lorena Magraner-Pardo, Celia P. Martinez-Jimenez, Vicente Tordera & Mercè Pamblanco. (2014) Comprehensive analysis of interacting proteins and genome-wide location studies of the Sas3-dependent NuA3 histone acetyltransferase complex. FEBS Open Bio 4:1, pages 996-1006.
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L. Aravind, Vivek Anantharaman, Saraswathi Abhiman & Lakshminarayan M. Iyer. 2013. Protein Families. Protein Families 421 502 .
Christie S Chang, Astrid Clarke & Lorraine Pillus. (2012) Suppression Analysis of esa1 Mutants in Saccharomyces cerevisiae Links NAB3 to Transcriptional Silencing and Nucleolar Functions . G3 Genes|Genomes|Genetics 2:10, pages 1223-1232.
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Anne Schwabe, Katja N. Rybakova & Frank J. Bruggeman. (2012) Transcription Stochasticity of Complex Gene Regulation Models. Biophysical Journal 103:6, pages 1152-1161.
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Mikael V Garabedian, Chiaki Noguchi, Melissa A Ziegler, Mukund M Das, Tanu Singh, Logan J Harper, Adam R Leman, Lyne Khair, Bettina A Moser, Toru M Nakamura & Eishi Noguchi. (2012) The Double-Bromodomain Proteins Bdf1 and Bdf2 Modulate Chromatin Structure to Regulate S-Phase Stress Response in Schizosaccharomyces pombe . Genetics 190:2, pages 487-500.
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Ramesh Subrahmanyam & Ranjan Sen. (2010) RAGs’ eye view of the immunoglobulin heavy chain gene locus. Seminars in Immunology 22:6, pages 337-345.
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Emma L. Turner, Mackenzie E. Malo, Marnie G. Pisclevich, Megan D. Dash, Gerald F. Davies, Terra G. Arnason & Troy A. A. Harkness. (2010) The Saccharomyces cerevisiae Anaphase-Promoting Complex Interacts with Multiple Histone-Modifying Enzymes To Regulate Cell Cycle Progression. Eukaryotic Cell 9:10, pages 1418-1431.
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Evangelia Koutelou, Calley L Hirsch & Sharon YR Dent. (2010) Multiple faces of the SAGA complex. Current Opinion in Cell Biology 22:3, pages 374-382.
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Kazushige Ohtsuki, Koji Kasahara, Katsuhiko Shirahige & Tetsuro Kokubo. (2010) Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters. Nucleic Acids Research 38:6, pages 1805-1820.
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Kitty F Verzijlbergen, Alex W Faber, Iris JE Stulemeijer & Fred van Leeuwen. (2009) Multiple histone modifications in euchromatin promote heterochromatin formation by redundant mechanisms in Saccharomyces cerevisiae. BMC Molecular Biology 10:1.
Crossref
R. Magnus N. Friis, Bob P. Wu, Stacey N. Reinke, Darren J. Hockman, Brian D. Sykes & Michael C. Schultz. (2009) A glycolytic burst drives glucose induction of global histone acetylation by picNuA4 and SAGA. Nucleic Acids Research 37:12, pages 3969-3980.
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Tirtha Chakraborty, Thomas Perlot, Ramesh Subrahmanyam, Anant Jani, Peter H. Goff, Yu Zhang, Irina Ivanova, Frederick W. Alt & Ranjan Sen. (2009) A 220-nucleotide deletion of the intronic enhancer reveals an epigenetic hierarchy in immunoglobulin heavy chain locus activation. Journal of Experimental Medicine 206:5, pages 1019-1027.
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Yu-yi Lin, Yan Qi, Jin-ying Lu, Xuewen Pan, Daniel S. Yuan, Yingming Zhao, Joel S. Bader & Jef D. Boeke. (2008) A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation. Genes & Development 22:15, pages 2062-2074.
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Eliana B Gómez, Rebecca L Nugent, Sebastián Laria & Susan L Forsburg. (2008) Schizosaccharomyces pombe Histone Acetyltransferase Mst1 (KAT5) Is an Essential Protein Required for Damage Response and Chromosome Segregation . Genetics 179:2, pages 757-771.
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Jung Kyoon Choi & Young-Joon Kim. (2008) Epigenetic regulation and the variability of gene expression. Nature Genetics 40:2, pages 141-147.
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Lakshminarayan M. Iyer, Vivek Anantharaman, Maxim Y. Wolf & L. Aravind. (2008) Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes. International Journal for Parasitology 38:1, pages 1-31.
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Jeremy A. Daniel & Patrick A. Grant. (2007) Multi-tasking on chromatin with the SAGA coactivator complexes. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 618:1-2, pages 135-148.
Crossref
Joke J.F.A. van Vugt, Michael Ranes, Coen Campsteijn & Colin Logie. (2007) The ins and outs of ATP-dependent chromatin remodeling in budding yeast: Biophysical and proteomic perspectives. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1769:3, pages 153-171.
Crossref
. (2006) Current awareness on yeast. Yeast 23:14-15, pages 1115-1122.
Crossref
Shannon R. UffenbeckJocelyn E. Krebs. (2006) The role of chromatin structure in regulating stress-induced transcription in Saccharomyces cerevisiae This paper is one of a selection of papers published in this Special Issue, entitled 27th International West Coast Chromatin and Chromosome Conference, and has undergone the Journal's usual peer review process. . Biochemistry and Cell Biology 84:4, pages 477-489.
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