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Annals of Tropical Medicine & Parasitology Volume 105, 2011 - Issue 8
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Original Article

Investigations and comparative detection of Cryptosporidium species by microscopy, nested PCR and LAMP in water supplies of Ordu, Middle Black Sea, Turkey

Z Koloren Department of BiologyFaculty of Arts and Sciences, University of Ordu, Ordu, TurkeyCorrespondence[email protected]
,
I SotiriadouCentre of Dental Medicine, Policlinic of Operative Dentistry and Periodontology, University of Cologne, Cologne, Germany; Medical and Molecular ParasitologyCenter of Anatomy, Institute II, Medical School, University of Cologne, Cologne, Germany
&
P Karanis Medical and Molecular ParasitologyCenter of Anatomy, Institute II, Medical School, University of Cologne, Cologne, Germany
Pages 607-615 | Received 18 Jul 2011, Accepted 11 Nov 2011, Published online: 22 Nov 2013

Citations (26)

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Zeynep Koloren. (2013) Sensitive and Cost-Effective Detection of Toxoplasma Gondii in Water Supplies of the Black Sea in Turkey by Loop-Mediated Isothermal Amplification (LAMP). Biotechnology & Biotechnological Equipment 27:1, pages 3543-3546.
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Articles from other publishers (25)

Rayan Silva de Paula, Rubens Lima Monte-Neto, Gabriel da Luz Wallau, Mariana de Paula Reis, Clara Carvalho Souza, Júlia Meireles Nogueira, Antonio Valadão Cardoso & Erika Cristina Jorge. (2023) Laboratory validation of loop-mediated isothermal amplification (LAMP) assay for Limnoperna fortunei (Dunker 1857) detection. Biological Invasions 25:12, pages 3859-3870.
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Rana Elseadawy, Ibrahim Abbas, Moustafa Al-Araby & Salah Abu-Elwafa. (2023) Occurrence and molecular characterization of Acanthamoeba, Naegleria fowleri and Blastocystis in water samples from various sources in Egypt. Acta Tropica 237, pages 106733.
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Marie-Stéphanie Fradette, Alexander I. Culley & Steve J. Charette. (2022) Detection of Cryptosporidium spp. and Giardia spp. in Environmental Water Samples: A Journey into the Past and New Perspectives. Microorganisms 10:6, pages 1175.
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David Porco, Sylvie Hermant, Chanistya Ayu Purnomo, Mario Horn, Guy Marson & Guy Colling. (2022) eDNA-based detection of the invasive crayfish Pacifastacus leniusculus in streams with a LAMP assay using dependent replicates to gain higher sensitivity. Scientific Reports 12:1.
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Ulku Karaman, Zeynep Koloren & Panagiotis Karanis. (2022) Survey and first report of Acanthamoeba T4 genotype in natural spring water resources in the Black Sea, Turkey . Journal of Water and Health 20:1, pages 193-204.
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Sheena M. Feist & Richard F. Lance. (2021) Advanced molecular-based surveillance of quagga and zebra mussels: A review of environmental DNA/RNA (eDNA/eRNA) studies and considerations for future directions. NeoBiota 66, pages 117-159.
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İlknur Koyun, Zeynep Kolören, Ülkü Karaman, Amalia Tsiami & Panagiotis Karanis. (2020) Acanthamoeba spp. in river water samples from the Black Sea region, Turkey. Journal of Water and Health 18:2, pages 186-199.
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Solmaz Madadi, Mahmoud Mahami-Oskouei, Mandana Rafeey, Adel Spotin, Nayyereh Aminisani, Leyla Mahami-Oskouei, Roghayeh Ghoyounchi & Reza Berahmat. (2020) Comparative evaluation of Cryptosporidium infection in malnourished and well-nourished children: Parasitic infections are affected by the interaction of nutritional status and socio-demographic characteristics. Comparative Immunology, Microbiology and Infectious Diseases 68, pages 101406.
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Maggie R. Williams & Syed A. Hashsham. 2019. Foodborne Bacterial Pathogens. Foodborne Bacterial Pathogens 21 33 .
Folasade Esther Adeyemo, Gulshan Singh, Poovendhree Reddy & Thor Axel Stenström. (2018) Methods for the detection of Cryptosporidium and Giardia: From microscopy to nucleic acid based tools in clinical and environmental regimes. Acta Tropica 184, pages 15-28.
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Shirzad Fallahi, Seyedeh Fatemeh Moosavi, Azadeh Karimi, Ali Sharafi Chegeni, Mohammad Saki, Parsa Namdari, Mohammad Menati Rashno, Ali Mohamad Varzi, Mohammad Javad Tarrahi & Mohammad Almasian. (2018) An advanced uracil DNA glycosylase-supplemented loop-mediated isothermal amplification (UDG-LAMP) technique used in the sensitive and specific detection of Cryptosporidium parvum , Cryptosporidium hominis , and Cryptosporidium meleagridis in AIDS patients. Diagnostic Microbiology and Infectious Disease 91:1, pages 6-12.
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Zeynep Koloren, Berivan Basak Gulabi & Panagiotis Karanis. (2018) Molecular identification of Blastocystis sp. subtypes in water samples collected from Black sea, Turkey. Acta Tropica 180, pages 58-68.
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Timothy S. Mamba, Cecilia K. Mbae, Johnson Kinyua, Erastus Mulinge, Gitonga Nkanata Mburugu & Zablon K. Njiru. (2018) Lateral Flow Loop-Mediated Isothermal Amplification Test with Stem Primers: Detection of Cryptosporidium Species in Kenyan Children Presenting with Diarrhea . Journal of Tropical Medicine 2018, pages 1-9.
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Andrea Estefanía Ramos, Marina Muñoz, Jesús Alfredo Cortés-Vecino, Paola Barato & Manuel Alfonso Patarroyo. (2017) A novel loop-mediated isothermal amplification-based test for detecting Neospora caninum DNA. Parasites & Vectors 10:1.
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Maggie R. Williams, Robert D. Stedtfeld, Cathrine Engle, Paul Salach, Umama Fakher, Tiffany Stedtfeld, Erin Dreelin, R. Jan Stevenson, Jo Latimore & Syed A. Hashsham. (2017) Isothermal amplification of environmental DNA (eDNA) for direct field-based monitoring and laboratory confirmation of Dreissena sp.. PLOS ONE 12:10, pages e0186462.
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Artemis Efstratiou, Jerry Ongerth & Panagiotis Karanis. (2017) Evolution of monitoring for Giardia and Cryptosporidium in water. Water Research 123, pages 96-112.
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Maggie R. Williams, Robert D. Stedtfeld, Tiffany M. Stedtfeld, James M. Tiedje & Syed A. Hashsham. (2017) Quantification of microRNAs directly from body fluids using a base-stacking isothermal amplification method in a point-of-care device. Biomedical Microdevices 19:3.
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Robert D. Stedtfeld, Tiffany M. Stedtfeld, Hassen Waseem, Meridith Fitschen-Brown, Xueping Guo, Benli Chai, Maggie R. Williams, Trevor Shook, Amanda Logan, Ally Graham, Jong-Chan Chae, Woo-Jun Sul, Jacob VanHouten, James R. Cole, Gerben J. Zylstra, James M. Tiedje, Brad L. Upham & Syed A. Hashsham. (2017) Isothermal assay targeting class 1 integrase gene for environmental surveillance of antibiotic resistance markers. Journal of Environmental Management 198, pages 213-220.
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zeynep koloren. (2017) LAMP DETECTION of Cryptosporidium SPECIES in SURFACE WATER SAMPLES COLLECTED from RIVER YESILIRMAK and STREAM TERSAKAN (Samsun-Amasya). ANADOLU UNIVERSITY JOURNAL OF SCIENCE AND TECHNOLOGY –C Life Sciences and Biotechnology 6:1.
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Robert D Stedtfeld, Tiffany M Stedtfeld, Farag Samhan, Yogendra H Kanitkar, Paul B. Hatzinger, Alison M Cupples & Syed A Hashsham. (2016) Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater. Journal of Microbiological Methods 131, pages 61-67.
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Zeynep Koloren, Onuralp Seferoğlu & Panagiotis Karanis. (2016) Occurency of Giardia duodenalis assemblages in river water sources of Black Sea, Turkey. Acta Tropica 164, pages 337-344.
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Zeynep Koloren & Emine Ayaz. (2016) Genotyping of Cryptosporidium spp. in environmental water in Turkey. Acta Parasitologica 61:4.
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Robert D. Stedtfeld, Tiffany M. Stedtfeld, Maggie Kronlein, Gregoire Seyrig, Robert J. Steffan, Alison M. Cupples & Syed A. Hashsham. (2014) DNA Extraction-Free Quantification of Dehalococcoides spp. in Groundwater Using a Hand-Held Device . Environmental Science & Technology 48:23, pages 13855-13863.
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Zeynep Koloren, Derya Kaya & Cumhur Avsar. (2013) Detection of Cryptosporidium Species in the Sea and Tap Water Samples of Black Sea, Turkey . Journal of Parasitology 99:3, pages 554-557.
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Zeynep Koloren & Elif Demirel. (2013) Detection of Toxoplasma gondii in Turkish River and Drinking Water Samples by Different PCR and LAMP Methods . CLEAN - Soil, Air, Water, pages n/a-n/a.
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