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Bioscience, Biotechnology, and Biochemistry Volume 63, 1999 - Issue 9
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Original Articles

Selective and Continuous Degradation of Carbazole Contained in Petroleum Oil by Resting Cells of Sphingomonas sp. CDH-7

Kohtaro KIRIMURADepartment of Applied Chemistry, School of Science and Engineering, Waseda University
,
Hiroyuki NAKAGAWADepartment of Applied Chemistry, School of Science and Engineering, Waseda University
,
Kenji TSUJIDepartment of Applied Chemistry, School of Science and Engineering, Waseda University
,
Kazuya MATSUDADepartment of Applied Chemistry, School of Science and Engineering, Waseda University
,
Ryuichiro KURANENational Institute of Bioscience and Human-Technology (NIBH)
&
Shoji USAMIDepartment of Applied Chemistry, School of Science and Engineering, Waseda University
Pages 1563-1568 | Received 23 Mar 1999, Accepted 18 May 1999, Published online: 22 May 2014

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Yan-Su Wang, Tian-Hao Wu, Yao Yang, Cen-Ling Zhu, Cheng-Long Ding & Chuan-Chao Dai. (2016) Binding and detoxification of chlorpyrifos by lactic acid bacteria on rice straw silage fermentation. Journal of Environmental Science and Health, Part B 51:5, pages 316-325.
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Yasuyuki HASHIDOKO, Emiko KITAGAWA, Hitoshi IWAHASHI, Erry PURNOMO, Toshihiro HASEGAWA & Satoshi TAHARA. (2007) Design of Sphingomonad-Detecting Probes for a DNA Array, and Its Application to Investigate the Behavior, Distribution, and Source of Rhizospherous Sphingomonas and Other Sphingomonads Inhabiting an Acid Sulfate Soil Paddock in Kalimantan, Indonesia. Bioscience, Biotechnology, and Biochemistry 71:2, pages 343-351.
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Articles from other publishers (45)

Hadi Koohkan, Mohammad Seddiq Mortazavi, Ahmad Golchin, Fereshteh Saraji & Gholamali Akbarzadeh-Chomachaei. (2023) Comparison of Native Bacterial and Fungal Bioaugmentation in the Removal of Petroleum from Soil in the Presence of Sorghum. Water, Air, & Soil Pollution 234:5.
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Hadi Koohkan, Mohammad Seddiq Mortazavi, Ahmad Golchin, Mehdi Najafi-Ghiri, Meimanatalzaman Golkhandan, Gholamali Akbarzadeh-Chomachaei & Fereshteh Saraji. (2023) The effect of petroleum levels on some soil biological properties under phytoremediation and bioaugmentation. Environmental Science and Pollution Research 30:21, pages 60618-60637.
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Eduardo Quiroz-Guzmán, Zoé P. Morreeuw, Alberto Peña-Rodríguez, Diana R. Barajas-Sandoval, Paola Magallón-Servín, Armando Mejía & Ana G. Reyes. (2023) Flavonoid-enriched extract of Agave lechuguilla bagasse as a feed supplement to prevent vibriosis in Pacific white shrimp Penaeus vannamei. Aquaculture 562, pages 738867.
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Y Shao, H Zhong, X Mao & H Zhang. (2020) Biochar-immobilized Sphingomonas sp. and Acinetobacter sp. isolates to enhance nutrient removal: potential application in crab aquaculture. Aquaculture Environment Interactions 12, pages 251-262.
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Tao Pan, Rennv Wang, Kun Xiao, Wei Ye, Wei Dong & Meiying Xu. (2019) Continuous degradation of phenanthrene in cloud point system by reuse of Sphingomonas polyaromaticivorans cells. AMB Express 9:1.
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Long Yun, Zonghe Yu, Yinyin Li, Peng Luo, Xiao Jiang, Yushun Tian & Xiongqi Ding. (2019) Ammonia nitrogen and nitrite removal by a heterotrophic Sphingomonas sp. strain LPN080 and its potential application in aquaculture. Aquaculture 500, pages 477-484.
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Xinwei Wang, Ting Cai, Weitao Wen & Zhihuan Zhang. (2018) Effect of biosurfactant on biodegradation of heteroatom compounds in heavy oil. Fuel 230, pages 418-429.
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Nour Shafik El-Gendy & Hussein Nabil Nassar. 2018. Biodesulfurization in Petroleum Refining. Biodesulfurization in Petroleum Refining 263 326 .
Liang Li, Guangsheng Qian, Linlin Ye, Xiaomin Hu, Xin Yu & Weijian Lyu. (2018) Research on the enhancement of biological nitrogen removal at low temperatures from ammonium-rich wastewater by the bio-electrocoagulation technology in lab-scale systems, pilot-scale systems and a full-scale industrial wastewater treatment plant. Water Research 140, pages 77-89.
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Prasenjit Ghosh & Suparna Mukherji. (2018) Optimization of media composition for enhancing carbazole degradation by Pseudomonas aeruginosa RS1. Journal of Environmental Chemical Engineering 6:2, pages 2881-2891.
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James G. Speight & Nour Shafik El-Gendy. 2018. Introduction to Petroleum Biotechnology. Introduction to Petroleum Biotechnology 229 258 .
Lateef B. Salam, Mathew O. Ilori & Olukayode O. Amund. (2017) Properties, environmental fate and biodegradation of carbazole. 3 Biotech 7:2.
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K. Zawadzka, P. Bernat, A. Felczak & K. Lisowska. (2015) Carbazole hydroxylation by the filamentous fungi of the Cunninghamella species. Environmental Science and Pollution Research 22:24, pages 19658-19666.
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L. B. Salam, M. O. Ilori, O. O. Amund, M. Numata, T. Horisaki & H. Nojiri. (2014) Carbazole angular dioxygenation and mineralization by bacteria isolated from hydrocarbon-contaminated tropical African soil. Environmental Science and Pollution Research 21:15, pages 9311-9324.
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Marcia Morales & Sylvie Le Borgne. 2017. Hydrocarbon and Lipid Microbiology Protocols. Hydrocarbon and Lipid Microbiology Protocols 201 218 .
Gajendra B. Singh, Sanjay Gupta & Nidhi Gupta. (2013) Carbazole degradation and biosurfactant production by newly isolated Pseudomonas sp. strain GBS.5. International Biodeterioration & Biodegradation 84, pages 35-43.
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Zahra Farajzadeh & Hamid Reza Karbalaei-Heidari. (2012) Isolation and characterization of a new Achromobacter sp. strain CAR1389 as a carbazole-degrading bacterium. World Journal of Microbiology and Biotechnology 28:10, pages 3075-3080.
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Ikuo Sato, Michihiro Ito, Masumi Ishizaka, Yoko Ikunaga, Yukari Sato, Shigenobu Yoshida, Motoo Koitabashi & Seiya Tsushima. (2012) Thirteen novel deoxynivalenol-degrading bacteria are classified within two genera with distinct degradation mechanisms. FEMS Microbiology Letters 327:2, pages 110-117.
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Cui Zhao, Yin Zhang, Xiaobao Li, Donghui Wen & Xiaoyan Tang. (2011) Biodegradation of carbazole by the seven Pseudomonas sp. strains and their denitrification potential. Journal of Hazardous Materials 190:1-3, pages 253-259.
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Yoko Ikunaga, Ikuo Sato, Stephanie Grond, Nobutaka Numaziri, Shigenobu Yoshida, Hiroko Yamaya, Syuntaro Hiradate, Morifumi Hasegawa, Hiroaki Toshima, Motoo Koitabashi, Michihiro Ito, Petr Karlovsky & Seiya Tsushima. (2010) Nocardioides sp. strain WSN05-2, isolated from a wheat field, degrades deoxynivalenol, producing the novel intermediate 3-epi-deoxynivalenol. Applied Microbiology and Biotechnology 89:2, pages 419-427.
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Zhonghui Gai, Xiaoyu Wang, Xiaorui Liu, Cui Tai, Hongzhi Tang, Xiaofei He, Geng Wu, Zixin Deng & Ping Xu. (2010) The Genes Coding for the Conversion of Carbazole to Catechol Are Flanked by IS6100 Elements in Sphingomonas sp. Strain XLDN2-5. PLoS ONE 5:4, pages e10018.
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M. Morales & S. Le Borgne. 2010. Handbook of Hydrocarbon and Lipid Microbiology. Handbook of Hydrocarbon and Lipid Microbiology 4553 4562 .
M. Morales & S. Le Borgne. 2010. Handbook of Hydrocarbon and Lipid Microbiology. Handbook of Hydrocarbon and Lipid Microbiology 2143 2157 .
Meiying Yang, Wenming Li, Xiaoxu Guo, Zhenhuan Qu, Xiaojuan Zhu & Xingzhi Wang. (2009) Isolation and identification of a carbazole degradation gene cluster from Sphingomonas sp.JS1. World Journal of Microbiology and Biotechnology 25:9, pages 1625-1631.
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Andreas Stolz. (2009) Molecular characteristics of xenobiotic-degrading sphingomonads. Applied Microbiology and Biotechnology 81:5, pages 793-811.
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Gladys Castorena, María Elena Acuña, Jorge Aburto & Ismael Bustos-Jaimes. (2008) Semi-continuous biodegradation of carbazole in fuels by biofilm-immobilised cells of Burkholderia sp. strain IMP5GC. Process Biochemistry 43:11, pages 1318-1321.
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Yu-Guang Li, Wang-Liang Li, Jie-Xun Huang, Xiao-Chao Xiong, Hong-Shuai Gao, Jian-Min Xing & Hui-Zhou Liu. (2008) Biodegradation of carbazole in oil/water biphasic system by a newly isolated bacterium Klebsiella sp. LSSE-H2. Biochemical Engineering Journal 41:2, pages 166-170.
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Weiqiang Guo, Daping Li, Yong Tao, Ping Gao & Jijun Hu. (2008) Isolation and Description of a Stable Carbazole-Degrading Microbial Consortium Consisting of Chryseobacterium sp. NCY and Achromobacter sp. NCW. Current Microbiology 57:3, pages 251-257.
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Atsushi Ishihara, Franck Dumeignil, Takako Aoyagi, Megumi Nishikawa, Masaaki Hosomi, Eika W. Qian & Yaeko Kabe. (2008) Degradation of Carbazole by <i>Novosphingobium</i> sp. Strain NIY3<i>Novosphingobium</i> sp. NIY3株を用いたカルバゾールの分解反応. Journal of the Japan Petroleum Institute 51:3, pages 174-179.
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Junichiro Enya, Hirosuke Shinohara, Shigenobu Yoshida, Takao Tsukiboshi, Hiromitsu Negishi, Kazuo Suyama & Seiya Tsushima. (2007) Culturable Leaf-Associated Bacteria on Tomato Plants and Their Potential as Biological Control Agents. Microbial Ecology 53:4, pages 524-536.
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Hideaki Nojiri & Toshio Omori. 2007. Pseudomonas. Pseudomonas 107 145 .
Li Li, Qinggang Li, Fuli Li, Quan Shi, Bo Yu, Fengrui Liu & Ping Xu. (2006) Degradation of carbazole and its derivatives by a Pseudomonas sp.. Applied Microbiology and Biotechnology 73:4, pages 941-948.
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G. Castorena, V. Mugica, S. Le Borgne, M.E. Acuna, I. Bustos-Jaimes & J. Aburto. (2006) Carbazole biodegradation in gas oil/water biphasic media by a new isolated bacterium Burkholderia sp. strain IMP5GC. Journal of Applied Microbiology 100:4, pages 739-745.
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Bo Yu, Ping Xu, Shanshan Zhu, Xiaofeng Cai, Ying Wang, Li Li, Fuli Li, Xiaoyong Liu & Cuiqing Ma. (2006) Selective Biodegradation of S and N Heterocycles by a Recombinant Rhodococcus erythropolis Strain Containing Carbazole Dioxygenase . Applied and Environmental Microbiology 72:3, pages 2235-2238.
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John J. KilbaneIIII. 2005. Petroleum Microbiology. Petroleum Microbiology 239 255 .
Kengo Inoue, Hiroshi Habe, Hisakazu Yamane, Toshio Omori & Hideaki Nojiri. (2005) Diversity of carbazole-degrading bacteria having the car gene cluster: Isolation of a novel gram-positive carbazole-degrading bacterium . FEMS Microbiology Letters 245:1, pages 145-153.
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Tatyana G Lobastova, Galina V Sukhodolskaya, Vera M Nikolayeva, Boris P Baskunov, Konstantin F Turchin & Marina V Donova. (2004) Hydroxylation of carbazoles by Aspergillus flavus VKM F-1024 . FEMS Microbiology Letters 235:1, pages 51-56.
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J.J. KilbaneIIII & S. Le Borgne. 2004. Petroleum Biotechnology - Developments and Perspectives. Petroleum Biotechnology - Developments and Perspectives 29 65 .
Haiping Huang, Bernard F.J. Bowler, Zhanwen Zhang, Thomas B.P. Oldenburg & Steve R. Larter. (2003) Influence of biodegradation on carbazole and benzocarbazole distributions in oil columns from the Liaohe basin, NE China. Organic Geochemistry 34:7, pages 951-969.
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Akira Hiraishi. (2003) Biodiversity of Dioxin-Degrading Microorganisms and Potential Utilization in Bioremediation.. Microbes and Environments 18:3, pages 105-125.
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John J Kilbane II, Amrutha Daram, Javaneh Abbasian & Kevin J Kayser. (2002) Isolation and characterization of Sphingomonas sp. GTIN11 capable of carbazole metabolism in petroleum. Biochemical and Biophysical Research Communications 297:2, pages 242-248.
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Hiroshi Habe, Yuji Ashikawa, Yuko Saiki, Takako Yoshida, Hideaki Nojiri & Toshio Omori. (2002) Sphingomonas sp. strain KA1, carrying a carbazole dioxygenase gene homologue, degrades chlorinated dibenzo- p -dioxins in soil . FEMS Microbiology Letters 211:1, pages 43-49.
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Hideaki Nojiri, Hiroshi Habe & Toshio Omori. (2001) Bacterial degradation of aromatic compounds via angular dioxygenation.. The Journal of General and Applied Microbiology 47:6, pages 279-305.
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KOHTARO KIRIMURA, TOSHIKI FURUYA, YASUHIRO NISHII, YOSHITAKA ISHII, KUNIKI KINO & SHOJI USAMI. (2001) Biodesulfurization of Dibenzothiophene and Its Derivatives through the Selective Cleavage of Carbon-Sulfur Bonds by a Moderately Thermophilic Bacterium Bacillus subtilis WU-S2B.. Journal of Bioscience and Bioengineering 91:3, pages 262-266.
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Kohtaro Kirimura, Toshiki Furuya, Yasuhiro Nishii, Yoshitaka Ishii, Kuniki Kino & Shoji Usami. (2001) Biodesulfurization of dibenzothiophene and its derivatives through the selective cleavage of carbon-sulfur bonds by a moderately thermophilic bacterim Bacillus subtilis WU-S2B. Journal of Bioscience and Bioengineering 91:3, pages 262-266.
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