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Proteomics, genomics and transcriptomics: their emerging roles in the discovery and validation of colorectal cancer biomarkers

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Melanie Blank, Aliza Thompson, Elizabeth Hausner & Rodney Rouse. (2018) Biomarkers of drug-induced acute kidney injury: a regulatory perspective. Expert Opinion on Drug Metabolism & Toxicology 14:9, pages 929-936.
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William CS Cho. (2014) Proteomics in translational cancer research: biomarker discovery for clinical applications. Expert Review of Proteomics 11:2, pages 131-133.
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Sofia FarkonaChiara PastrelloAna Konvalinka. (2023) Proteomics: Its Promise and Pitfalls in Shaping Precision Medicine in Solid Organ Transplantation. Transplantation 107:10, pages 2126-2142.
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Fatemeh Safari, Cheka Kehelpannala, Azadeh Safarchi, Amani M. Batarseh & Fatemeh Vafaee. (2023) Biomarker Reproducibility Challenge: A Review of Non-Nucleotide Biomarker Discovery Protocols from Body Fluids in Breast Cancer Diagnosis. Cancers 15:10, pages 2780.
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Prince Amoah Barnie, Daniel Boison, Benjamin Amoani & Su Zhaoliang. 2022. Handbook of Cancer and Immunology. Handbook of Cancer and Immunology 1 23 .
Isaac Micallef & Byron Baron. 2022. Recent Understanding of Colorectal Cancer Treatment. Recent Understanding of Colorectal Cancer Treatment.
Faddy Kamel, Nathalie Schneider, Pasha Nisar & Mikhail Soloviev. (2022) Bottom-Up Approach to the Discovery of Clinically Relevant Biomarker Genes: The Case of Colorectal Cancer. Cancers 14:11, pages 2654.
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María Gallardo-Gómez, Paula Álvarez-Chaver, Alberto Cepeda, Patricia Regal, Alexandre Lamas & Loretta De Chiara. 2022. Foundations of Colorectal Cancer. Foundations of Colorectal Cancer 249 263 .
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Qiongxin Liang, Jing Dong, Senye Wang, Wenjing Shao, Adel F. Ahmed, Yan Zhang & Wenyi Kang. (2021) Immunomodulatory effects of Nigella sativa seed polysaccharides by gut microbial and proteomic technologies. International Journal of Biological Macromolecules 184, pages 483-496.
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Hande Beklen, Esra Yildirim, Medi Kori, Beste Turanli & Kazim Yalcin Arga. (2021) Systems-level biomarkers identification and drug repositioning in colorectal cancer. World Journal of Gastrointestinal Oncology 13:7, pages 638-661.
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Zheyu Zhang, Sifang Zhang, Jingjing Yang, Pengji Yi, Panpan Xu, Min Yi & Weijun Peng. (2020) Integrated transcriptomic and metabolomic analyses to characterize the anti-cancer effects of (−)-epigallocatechin-3-gallate in human colon cancer cells. Toxicology and Applied Pharmacology 401, pages 115100.
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Bruno Augusto Alves Martins, Gabriel Fonseca de Bulhões, Igor Norat Cavalcanti, Mickaella Michelson Martins, Paulo Gonçalves de Oliveira & Aline Maria Araújo Martins. (2019) Biomarkers in Colorectal Cancer: The Role of Translational Proteomics Research. Frontiers in Oncology 9.
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Yujia He, Abidali Mohamedali, Canhua Huang, Mark S. Baker & Edouard C. Nice. (2019) Oncoproteomics: Current status and future opportunities. Clinica Chimica Acta 495, pages 611-624.
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Emanuelle M. Rizk, Robyn D. Gartrell, Luke W. Barker, Camden L. Esancy, Grace G. Finkel, Darius D. Bordbar & Yvonne M. Saenger. (2019) Prognostic and Predictive Immunohistochemistry-Based Biomarkers in Cancer and Immunotherapy. Hematology/Oncology Clinics of North America 33:2, pages 291-299.
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Liyuan Peng, David I. Cantor, Canhua Huang, Kui Wang, Mark S. Baker & Edouard C. Nice. (2018) Tissue and plasma proteomics for early stage cancer detection. Molecular Omics 14:6, pages 405-423.
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Pey Yee Lee, Siok-Fong Chin, Teck Yew Low & Rahman Jamal. (2018) Probing the colorectal cancer proteome for biomarkers: Current status and perspectives. Journal of Proteomics 187, pages 93-105.
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Philip G. Murray, Adam Stevens, Chiara De Leonibus, Ekaterina Koledova, Pierre Chatelain & Peter E. Clayton. (2018) Transcriptomics and machine learning predict diagnosis and severity of growth hormone deficiency. JCI Insight 3:7.
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Paul D Wagner. 2017. Biomarkers in Cancer Screening and Early Detection. Biomarkers in Cancer Screening and Early Detection 141 150 .
Nieves González, Isabel Prieto, Laura del Puerto-Nevado, Sergio Portal-Nuñez, Juan Antonio Ardura, Marta Corton, Beatriz Fernández-Fernández, Oscar Aguilera, Carmen Gomez-Guerrero, Sebastián Mas, Juan Antonio Moreno, Marta Ruiz-Ortega, Ana Belen Sanz, Maria Dolores Sanchez-Niño, Federico Rojo, Fernando Vivanco, Pedro Esbrit, Carmen Ayuso, Gloria Alvarez-Llamas, Jesús Egido, Jesús García-Foncillas & Alberto Ortiz. (2017) 2017 update on the relationship between diabetes and colorectal cancer: epidemiology, potential molecular mechanisms and therapeutic implications. Oncotarget 8:11, pages 18456-18485.
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Changlin Zhang, Wencheng Ding, Yuan Liu, Zheng Hu, Da Zhu, Xiaoli Wang, Lan Yu, Liming Wang, Hui Shen, Weican Zhang, Ci Ren, Kezhen Li, Danhui Weng, Wuguo Deng, Ding Ma & Hui Wang. (2016) Proteomics-based identification of VDAC1 as a tumor promoter in cervical carcinoma. Oncotarget 7:32, pages 52317-52328.
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John V. Ilekis, Ekaterini Tsilou, Susan Fisher, Vikki M. Abrahams, Michael J. Soares, James C. Cross, Stacy Zamudio, Nicholas P. Illsley, Leslie Myatt, Christine Colvis, Maged M. Costantine, David M. Haas, Yoel Sadovsky, Carl Weiner, Erik Rytting & Gene Bidwell. (2016) Placental origins of adverse pregnancy outcomes: potential molecular targets: an Executive Workshop Summary of the Eunice Kennedy Shriver National Institute of Child Health and Human Development. American Journal of Obstetrics and Gynecology 215:1, pages S1-S46.
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Moisés Blanco-Calvo, Ángel Concha, Angélica Figueroa, Federico Garrido & Manuel Valladares-Ayerbes. (2015) Colorectal Cancer Classification and Cell Heterogeneity: A Systems Oncology Approach. International Journal of Molecular Sciences 16:12, pages 13610-13632.
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