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Infection and Drug Resistance Volume 13, 2020 - Issue
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Case Report

Metagenomic Next-Generation Sequencing in Diagnosis of a Case of Pneumocystis jirovecii Pneumonia in a Kidney Transplant Recipient and Literature Review

Jie Chen1 Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, People’s Republic of ChinaORCID Iconhttps://orcid.org/0000-0002-4383-510X
ORCID Icon,
Ting He1 Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, People’s Republic of China
,
Xiujun Li2 Department of Pathology, College of Basic Medicine, Chongqing Medical University, Chongqing, People’s Republic of China
,
Xue Wang1 Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, People’s Republic of China
,
Li Peng1 Department of Respiratory and Critical Care Medicine, The First Affiliated Hospital of Chongqing Medical University, Chongqing, People’s Republic of ChinaCorrespondence[email protected]
ORCID Iconhttps://orcid.org/0000-0002-3362-0543
ORCID Icon &
Liang Ma3 Critical Care Medicine Department, NIH Clinical Center, Bethesda, MD, USAORCID Iconhttps://orcid.org/0000-0002-6078-5730
ORCID Icon
Pages 2829-2836 | Published online: 13 Aug 2020

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Li Liu, Mingjuan Yuan, Siqing Sun, Jinrong Wang, Yi Shi, Yamin Yu & Xin Su. (2022) The Performance of Metagenomic Next-Generation Sequence in the Diagnosis of Suspected Opportunistic Infections in Patients with Acquired Immunodeficiency Syndrome. Infection and Drug Resistance 15, pages 5645-5653.
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Dan Xie, Ying Xian, Jingya You, Wen Xu, Min Fan, Xiaogang Bi & Kouxing Zhang. (2021) Co-Infection Pneumonia with Mycobacterium abscessus and Pneumocystis jiroveci in a Patient without HIV Infection Diagnosed by Metagenomic Next-Generation Sequencing. Infection and Drug Resistance 14, pages 879-888.
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Dan Xie, Wen Xu, Jingya You, Xiaofeng Yuan, Mingliang Li, Xiaogang Bi, Kouxing Zhang, Heng Li & Ying Xian. (2021) Clinical descriptive analysis of severe Pneumocystis jirovecii pneumonia in renal transplantation recipients. Bioengineered 12:1, pages 1264-1272.
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Articles from other publishers (19)

Paige M.K. Larkin, Melvilí Cintrón & Rebekah M. Martin. (2023) Metagenomic Next-Generation Sequencing for Diagnosis of Pulmonary Infections. Clinical Microbiology Newsletter 45:3, pages 19-27.
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Hengxin Chen, Yujian Liang, Ruizhi Wang, Yijie Wu, Xiaoyun Zhang, Hao Huang, Xuegao Yu, Mengzhi Hong, Juhua Yang, Kang Liao, Hongxu Xu, Min Liu, Peisong Chen & Yili Chen. (2023) Metagenomic next-generation sequencing for the diagnosis of Pneumocystis jirovecii Pneumonia in critically pediatric patients. Annals of Clinical Microbiology and Antimicrobials 22:1.
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Pengcheng Lin, Yi Chen, Shanshan Su, Wengang Nan, Lingping Zhou, Ying Zhou & Yuping Li. (2022) Diagnostic value of metagenomic next-generation sequencing of bronchoalveolar lavage fluid for the diagnosis of suspected pneumonia in immunocompromised patients. BMC Infectious Diseases 22:1.
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Zutao Chen, Xiao Liu, Yajuan Wang & Yunhai Yao. (2022) Vibrio Septicemia Diagnosed With Next-Generation Sequencing: A Case Report. Infectious Microbes and Diseases 4:4, pages 178-180.
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Mengyi Zhao, Ruiming Yue, Xiaoxiao Wu, Zhan Gao, Miao He & Lingai Pan. (2022) The diagnostic value of metagenomic next-generation sequencing for identifying Pneumocystis jirovecii infection in non-HIV immunocompromised patients. Frontiers in Cellular and Infection Microbiology 12.
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Jun-Na Hou, Heng-Dao Liu, Qiu-Yue Tan, Feng-An Cao, Shi-Lei Wang, Meng-Ying Yao & Yang-Chao Zhao. (2022) Risk factors of in-hospital mortality in patients with pneumocystis pneumonia diagnosed by metagenomics next-generation sequencing. Frontiers in Cellular and Infection Microbiology 12.
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Xiao Jin, Juan Li, Mingyue Shao, Xuedong Lv, Ningfei Ji, Yehan Zhu, Mao Huang, Feichao Yu, Changwen Zhang, Lixu Xie, Jianling Huang, Sixi Chen, Changjun Zhu, Minjie Lv & Ganzhu Feng. (2022) Improving Suspected Pulmonary Infection Diagnosis by Bronchoalveolar Lavage Fluid Metagenomic Next-Generation Sequencing: a Multicenter Retrospective Study. Microbiology Spectrum 10:4.
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Limin Sun, Shuguang Zhang, Ziyue Yang, Fei Yang, Zhenhua Wang, Hongqiang Li, Yaoguang Li & Tongwen Sun. (2022) Clinical Application and Influencing Factor Analysis of Metagenomic Next-Generation Sequencing (mNGS) in ICU Patients With Sepsis. Frontiers in Cellular and Infection Microbiology 12.
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Jilin Zou, Tianyu Wang, Tao Qiu, Jiangqiao Zhou, Zhongbao Chen, Xiaoxiong Ma, Zeya Jin, Yu Xu & Long Zhang. (2022) Single-center retrospective analysis of Pneumocystis jirovecii pneumonia in patients after deceased donor renal transplantation. Transplant Immunology 72, pages 101593.
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Jiali Duan, Jing Gao, Qiuhong Liu, Mengfei Sun, Yang Liu, Yingshuai Tan & Lihua Xing. (2022) Characteristics and Prognostic Factors of Non-HIV Immunocompromised Patients With Pneumocystis Pneumonia Diagnosed by Metagenomics Next-Generation Sequencing. Frontiers in Medicine 9.
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Chun-Rong Ju, Qiao-Yan Lian, Wei-Jie Guan, Ao Chen, Jian-Heng Zhang, Xin Xu, Rong-Chang Chen, Shi-Yue Li & Jian-Xing He. (2022) Metagenomic Next-Generation Sequencing for Diagnosing Infections in Lung Transplant Recipients: A Retrospective Study. Transplant International 36.
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Li Liu, Mingjuan Yuan, Yi Shi & Xin Su. (2021) Clinical Performance of BAL Metagenomic Next-Generation Sequence and Serum (1,3)-β-D-Glucan for Differential Diagnosis of Pneumocystis jirovecii Pneumonia and Pneumocystis jirovecii Colonisation. Frontiers in Cellular and Infection Microbiology 11.
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Juan Jiang, Lu Bai, Wei Yang, Wenzhong Peng, Jian An, Yanhao Wu, Pinhua Pan & Yuanyuan Li. (2021) Metagenomic Next-Generation Sequencing for the Diagnosis of Pneumocystis jirovecii Pneumonia in Non-HIV-Infected Patients: A Retrospective Study. Infectious Diseases and Therapy 10:3, pages 1733-1745.
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Feng Zhang, Jia Chen, He Huang, Xiaolong Deng, Wei Zhang, Min Zeng, Rangjiao Liu, Lizhong Dai & Qiquan Wan. (2021) Application of metagenomic next-generation sequencing in the diagnosis and treatment guidance of Pneumocystis jirovecii pneumonia in renal transplant recipients. European Journal of Clinical Microbiology & Infectious Diseases 40:9, pages 1933-1942.
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Chi-Ching Tsang, Jade L. L. Teng, Susanna K. P. Lau & Patrick C. Y. Woo. (2021) Rapid Genomic Diagnosis of Fungal Infections in the Age of Next-Generation Sequencing. Journal of Fungi 7:8, pages 636.
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Pengfeng Yang, Xiaoqiu Zhu, Weixiang Liang & Ruiming Cai. (2021) The risk factor analysis and treatment experience in pneumocystis jirovecii pneumonia after kidney transplantation. Mycoses 64:5, pages 495-502.
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Qian Yu, Xuchun Ding, Wen Wang & Yafang Lou. (2021) Pneumocystis jiroveci pneumonia with cytomegalovirus infection diagnosed by metagenomic next-generation sequencing in a patient with nephrotic syndrome. Medicine 100:31, pages e26842.
Crossref
Isa F. Ashoor & Sonia Solomon. 2021. Challenges in Pediatric Kidney Transplantation. Challenges in Pediatric Kidney Transplantation 145 176 .
Na Li, Qingqing Cai, Qing Miao, Zeshi Song, Yuan Fang & Bijie Hu. (2020) High‐Throughput Metagenomics for Identification of Pathogens in the Clinical Settings. Small Methods 5:1, pages 2000792.
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