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Review Article

Role of oxygenases in guiding diverse metabolic pathways in the bacterial degradation of low-molecular-weight polycyclic aromatic hydrocarbons: A review

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Pages 64-90 | Received 05 May 2010, Accepted 28 Jul 2010, Published online: 16 Sep 2010

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Crossref
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Crossref
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Crossref
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Crossref
Alba Lara-Moreno, Esmeralda Morillo, Francisco Merchán & Jaime Villaverde. (2021) A comprehensive feasibility study of effectiveness and environmental impact of PAH bioremediation using an indigenous microbial degrader consortium and a novel strain Stenotrophomonas maltophilia CPHE1 isolated from an industrial polluted soil. Journal of Environmental Management 289, pages 112512.
Crossref
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Crossref
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Crossref
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Crossref
Thomas Mainka, David Weirathmüller, Christoph Herwig & Stefan Pflügl. (2021) Potential applications of halophilic microorganisms for biological treatment of industrial process brines contaminated with aromatics. Journal of Industrial Microbiology and Biotechnology 48:1-2.
Crossref
Vishnu Rajput, Tatiana Minkina, Ivan Semenkov, Galya Klink, Sarieh Tarigholizadeh & Svetlana Sushkova. (2020) Phylogenetic analysis of hyperaccumulator plant species for heavy metals and polycyclic aromatic hydrocarbons. Environmental Geochemistry and Health 43:4, pages 1629-1654.
Crossref
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Crossref
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Crossref
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Crossref
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Pooja Saraswat, Kritika Yadav, Anamika Gupta, Mrinalini Prasad & Rajiv Ranjan. 2021. Handbook of Bioremediation. Handbook of Bioremediation 535 550 .
Salom Gnana Thanga Vincent, Tim Jennerjahn & Kumarasamy Ramasamy. 2021. Microbial Communities in Coastal Sediments. Microbial Communities in Coastal Sediments 147 166 .
Khalida Khatoon, Mohammad Anas, Zarreena Siddiqui & Abdul Malik. 2021. Microbiomes and the Global Climate Change. Microbiomes and the Global Climate Change 295 319 .
Avani Bharatkumar Patel, Shabnam Shaikh, Kunal R. Jain, Chirayu Desai & Datta Madamwar. (2020) Polycyclic Aromatic Hydrocarbons: Sources, Toxicity, and Remediation Approaches. Frontiers in Microbiology 11.
Crossref
Jianfeng Liu, Changmei Wang, Kai Wu, Zhengkang Tang, Suyi Peng, Jiang Huang, Fuyuan Li, Xingling Zhao, Fang Yin, Bin Yang, Jing Liu, Hong Yang & Wudi Zhang. (2020) Comparison of long-term energy efficiency and microbial community dynamics of different reactors in response to increased loadings of water hyacinth juice. Science of The Total Environment 744, pages 140812.
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Allison T. Karp, Alex I. Holman, Peter Hopper, Kliti Grice & Katherine H. Freeman. (2020) Fire distinguishers: Refined interpretations of polycyclic aromatic hydrocarbons for paleo-applications. Geochimica et Cosmochimica Acta 289, pages 93-113.
Crossref
Sakshi & A. K. Haritash. (2020) A comprehensive review of metabolic and genomic aspects of PAH-degradation. Archives of Microbiology 202:8, pages 2033-2058.
Crossref
Zhiliang Yu, Zeyu Hu, Qimiao Xu, Mengting Zhang, Nate Yuan, Jiongru Liu, Qiu Meng & Jianhua Yin. (2020) The LuxI/LuxR-Type Quorum Sensing System Regulates Degradation of Polycyclic Aromatic Hydrocarbons via Two Mechanisms. International Journal of Molecular Sciences 21:15, pages 5548.
Crossref
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Crossref
Tahseen Sayara & Antoni Sánchez. (2020) Bioremediation of PAH-Contaminated Soils: Process Enhancement through Composting/Compost. Applied Sciences 10:11, pages 3684.
Crossref
Jong Cheol Shon, Young Ji Noh, Young Sang Kwon, Jong - Hwan Kim, Zhexue Wu & Jong - Su Seo. (2020) The impact of phenanthrene on membrane phospholipids and its biodegradation by Sphingopyxis soli. Ecotoxicology and Environmental Safety 192, pages 110254.
Crossref
Sanderson Tarciso Pereira de Sousa, Lucélia Cabral, Gileno Vieira Lacerda-Júnior, Melline Fontes Noronha, Júlia Ronzella Ottoni, Adilson Sartoratto & Valéria Maia de Oliveira. (2020) Exploring the genetic potential of a fosmid metagenomic library from an oil-impacted mangrove sediment for metabolism of aromatic compounds. Ecotoxicology and Environmental Safety 189, pages 109974.
Crossref
Patricia Giovanella, Gabriela A.L. Vieira, Igor V. Ramos Otero, Elisa Pais Pellizzer, Bruno de Jesus Fontes & Lara D. Sette. (2020) Metal and organic pollutants bioremediation by extremophile microorganisms. Journal of Hazardous Materials 382, pages 121024.
Crossref
Dian Chen, Shurui Wu, Haoan Xue & Jiandong Jiang. (2020) Stereoselective catabolism of compounds by microorganisms: Catabolic pathway, molecular mechanism and potential application. International Biodeterioration & Biodegradation 146, pages 104822.
Crossref
Anjney Sharma, Hena Jamali, Anukool Vaishnav, Balendu Shekhar Giri & Alok Kumar Srivastava. 2020. New and Future Developments in Microbial Biotechnology and Bioengineering: Microbial Biofilms. New and Future Developments in Microbial Biotechnology and Bioengineering: Microbial Biofilms 205 219 .
Javier Carrillo-Campos. (2019) Estructura y función de las oxigenasas tipo Rieske/mononuclear. TIP Revista Especializada en Ciencias Químico-Biológicas 22.
Crossref
Jina Rajkumari, Bhrigu Bhuyan, Nandita Das & Piyush Pandey. (2019) Environmental applications of microbial extremophiles in the degradation of petroleum hydrocarbons in extreme environments. Environmental Sustainability 2:3, pages 311-328.
Crossref
Han Ming Gan, Ernõ Szegedi, Rabeb Fersi, Samir Chebil, László Kovács, Akira Kawaguchi, André O. Hudson, Thomas J. Burr & Michael A. Savka. (2019) Insight Into the Microbial Co-occurrence and Diversity of 73 Grapevine (Vitis vinifera) Crown Galls Collected Across the Northern Hemisphere. Frontiers in Microbiology 10.
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Gajanan T. Mehetre, Syed G. Dastager & Mahesh S. Dharne. (2019) Biodegradation of mixed polycyclic aromatic hydrocarbons by pure and mixed cultures of biosurfactant producing thermophilic and thermo-tolerant bacteria. Science of The Total Environment 679, pages 52-60.
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Byung Hong Kim & Geoffrey Michael Gadd. 2019. Prokaryotic Metabolism and Physiology. Prokaryotic Metabolism and Physiology 185 229 .
Elena Cerro‐Gálvez, Paulo Casal, Daniel Lundin, Benjamin Piña, Jarone Pinhassi, Jordi Dachs & Maria Vila‐Costa. (2019) Microbial responses to anthropogenic dissolved organic carbon in the Arctic and Antarctic coastal seawaters. Environmental Microbiology 21:4, pages 1466-1481.
Crossref
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Crossref
Somnath Mallick. (2019) Biodegradation of acenaphthene by Sphingobacterium sp. strain RTSB involving trans-3-carboxy-2-hydroxybenzylidenepyruvic acid as a metabolite. Chemosphere 219, pages 748-755.
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Matías A. Musumeci, Claudia L. Loviso, Mariana Lozada, Flavia V. Ferreira & Hebe M. Dionisi. (2019) Substrate specificities of aromatic ring-hydroxylating oxygenases of an uncultured gammaproteobacterium from chronically-polluted subantarctic sediments. International Biodeterioration & Biodegradation 137, pages 127-136.
Crossref
Youry Pii, Laura Marastoni, Elisa Gemassmer, Fabio Valentinuzzi, Fabrizio Mazzetto, Tanja Mimmo & Stefano Cesco. (2019) Phytotoxicity alleviation by bacterial species isolated from polycyclic aromatic hydrocarbons (PAHs) contaminated sites. Environmental Technology & Innovation 13, pages 104-112.
Crossref
Yunho Lee, Yunhee Lee & Che Ok Jeon. (2019) Biodegradation of naphthalene, BTEX, and aliphatic hydrocarbons by Paraburkholderia aromaticivorans BN5 isolated from petroleum-contaminated soil. Scientific Reports 9:1.
Crossref
Eric Marques, Gislaine Silva, João Dias, Eduardo Gross, Moara Costa & Rachel Rezende. (2019) Cave Drip Water-Related Samples as a Natural Environment for Aromatic Hydrocarbon-Degrading Bacteria. Microorganisms 7:2, pages 33.
Crossref
Joaquim Vila, Sara N. Jiménez-Volkerink & Magdalena Grifoll. 2019. Comprehensive Biotechnology. Comprehensive Biotechnology 15 28 .
Tayssir Kadri, Agnieszka Cuprys, Tarek Rouissi & Satinder Kaur Brar. 2019. Environmental Contaminants: Ecological Implications and Management. Environmental Contaminants: Ecological Implications and Management 101 117 .
Jingjing Li, Qingguo Chen, Bo Bao, Mei Liu, Mutai Bao, Junzhi Liu & Jun Mu. (2018) RNA-seq analysis reveals the significant effects of different light conditions on oil degradation by marine Chlorella vulgaris. Marine Pollution Bulletin 137, pages 267-276.
Crossref
Mamdoh T. Jamal & Arulazhagan Pugazhendi. (2018) Degradation of petroleum hydrocarbons and treatment of refinery wastewater under saline condition by a halophilic bacterial consortium enriched from marine environment (Red Sea), Jeddah, Saudi Arabia. 3 Biotech 8:6.
Crossref
Hugo Ribeiro, Trelita de Sousa, João P. Santos, António G.G. Sousa, Catarina Teixeira, Maria R. Monteiro, Paula Salgado, Ana P. Mucha, C. Marisa R. Almeida, Luís Torgo & Catarina Magalhães. (2018) Potential of dissimilatory nitrate reduction pathways in polycyclic aromatic hydrocarbon degradation. Chemosphere 199, pages 54-67.
Crossref
Joydeep Chakraborty, Chiho Suzuki-Minakuchi, Kazunori Okada & Hideaki Nojiri. (2017) Thermophilic bacteria are potential sources of novel Rieske non-heme iron oxygenases. AMB Express 7:1.
Crossref
Jill E. Schrlau, Amber L. Kramer, Anna Chlebowski, Lisa Truong, Robert L. Tanguay, Staci L. Massey Simonich & Lewis Semprini. (2017) Formation of Developmentally Toxic Phenanthrene Metabolite Mixtures by Mycobacterium sp. ELW1 . Environmental Science & Technology 51:15, pages 8569-8578.
Crossref
Ying Sun, Zhenglong Wang, Shuyao Zhang, Xiaodan Li, Huaxin Gao & Chunyang Zhang. (2017) Characterization of a Naphthalene Catabolic Gene Cluster and Heterologous Expression of Naphthalene Dioxygenase Genes from Rhodococcus ruber OA1. Biotechnology(Faisalabad) 16:4-6, pages 165-173.
Crossref
Hui Lan, Hui Yang, Peiwang Li, Chong Wang, Haiyan Zhou, Hui Zhou, Hu Pan, Ye Yu, Xiangyang Lu & Yun Tian. (2017) Complete Genome Sequence of Enterobacter sp. Strain ODB01, a Bacterium That Degrades Crude Oil . Genome Announcements 5:10.
Crossref
Odd Gunnar Brakstad, Synnøve Lofthus, Deni Ribicic & Roman Netzer. 2017. Psychrophiles: From Biodiversity to Biotechnology. Psychrophiles: From Biodiversity to Biotechnology 613 644 .
Jingnan Jin, Jun Yao & Qingye Zhang. (2016) Biodegradation of Phenanthrene by Pseudomonas sp. JPN2 and Structure-Based Degrading Mechanism Study. Bulletin of Environmental Contamination and Toxicology 97:5, pages 689-694.
Crossref
Debajyoti Ghosal, Shreya Ghosh, Tapan K. Dutta & Youngho Ahn. (2016) Current State of Knowledge in Microbial Degradation of Polycyclic Aromatic Hydrocarbons (PAHs): A Review. Frontiers in Microbiology 7.
Crossref
Ludovic Pelosi, Anne-Lise Ducluzeau, Laurent Loiseau, Frédéric Barras, Dominique Schneider, Ivan Junier & Fabien Pierrel. (2016) Evolution of Ubiquinone Biosynthesis: Multiple Proteobacterial Enzymes with Various Regioselectivities To Catalyze Three Contiguous Aromatic Hydroxylation Reactions. mSystems 1:4.
Crossref
Vincent Bonifay, Egemen Aydin, Deniz F. Aktas, Jan Sunner & Joseph M. Suflita. 2017. Hydrocarbon and Lipid Microbiology Protocols. Hydrocarbon and Lipid Microbiology Protocols 111 161 .
Joaquim Vila, Margalida Tauler & Magdalena Grifoll. (2015) Bacterial PAH degradation in marine and terrestrial habitats. Current Opinion in Biotechnology 33, pages 95-102.
Crossref
Albert L. Juhasz, Sam Aleer & Eric M. Adetutu. (2014) Predicting PAH bioremediation efficacy using bioaccessibility assessment tools: Validation of PAH biodegradation–bioaccessibility correlations. International Biodeterioration & Biodegradation 95, pages 320-329.
Crossref
Joydeep Chakraborty, Tanmoy Jana, Sudipto Saha & Tapan K. Dutta. (2014) R ing‐ H ydroxylating O xygenase database: a database of bacterial aromatic ring‐hydroxylating oxygenases in the management of bioremediation and biocatalysis of aromatic compounds . Environmental Microbiology Reports 6:5, pages 519-523.
Crossref
Yihua Lyu, Wei Zheng, Tianling Zheng & Yun Tian. (2014) Biodegradation of Polycyclic Aromatic Hydrocarbons by Novosphingobium pentaromativorans US6-1. PLoS ONE 9:7, pages e101438.
Crossref
Jason S. Lee, Richard I. Ray, Brenda J. Little, Kathleen E. Duncan, Deniz F. Aktas, Athenia L. Oldham, Irene A. Davidova & Joseph M. Suflita. (2014) Issues for storing plant-based alternative fuels in marine environments. Bioelectrochemistry 97, pages 145-153.
Crossref
Piyali Pal Chowdhury, Jayita Sarkar, Soumik Basu & Tapan K. Dutta. (2014) Metabolism of 2-hydroxy-1-naphthoic acid and naphthalene via gentisic acid by distinctly different sets of enzymes in Burkholderia sp. strain BC1. Microbiology 160:5, pages 892-902.
Crossref
Arindam Dutta, Joydeep Chakraborty & Tapan K. Dutta. (2013) Episodic positive selection during the evolution of naphthalene dioxygenase to nitroarene dioxygenase. Biochemical and Biophysical Research Communications 440:1, pages 68-75.
Crossref
Deniz F. Aktas, Jason S. Lee, Brenda J. Little, Kathleen E. Duncan, B. Monica Perez-Ibarra & Joseph M. Suflita. (2013) Effects of oxygen on biodegradation of fuels in a corroding environment. International Biodeterioration & Biodegradation 81, pages 114-126.
Crossref
Debajyoti Ghosal, Arindam Dutta, Joydeep Chakraborty, Soumik Basu & Tapan K. Dutta. (2013) Characterization of the metabolic pathway involved in assimilation of acenaphthene in Acinetobacter sp. strain AGAT-W. Research in Microbiology 164:2, pages 155-163.
Crossref
Alexandre de Menezes, Nicholas Clipson & Evelyn Doyle. (2012) Comparative metatranscriptomics reveals widespread community responses during phenanthrene degradation in soil. Environmental Microbiology 14:9, pages 2577-2588.
Crossref
Abigail A. Adebusuyi, Angela Y. Smith, Murray R. Gray & Julia M. Foght. (2012) The EmhABC efflux pump decreases the efficiency of phenanthrene biodegradation by Pseudomonas fluorescens strain LP6a. Applied Microbiology and Biotechnology 95:3, pages 757-766.
Crossref
Madhumita Roy, Pratick Khara & Tapan K. Dutta. (2012) meta-Cleavage of hydroxynaphthoic acids in the degradation of phenanthrene by Sphingobium sp. strain PNB. Microbiology 158:3, pages 685-695.
Crossref
Ju Hye Baek, Kyung Hyun Kim, Yunhee Lee, Sang Eun Jeong, Hyun Mi Jin, Baolei Jia & Che Ok Jeon. (2021) Elucidating the Bio Degradation Pathway and Catabolic Genes of B Enzophenone-3, a Xenobiotic, in <i>Rhodococcus</i> Sp. S2-17. SSRN Electronic Journal.
Crossref

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