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Evaluation of the effectiveness of semen storage and sperm purification methods for spermatozoa transcript profiling

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Pages 287-295 | Received 15 Mar 2013, Accepted 15 May 2013, Published online: 19 Jul 2013

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Grace M. Swanson, Molly S. Estill & Stephen A. Krawetz. (2022) The transcript integrity index (TII) provides a standard measure of sperm RNA. Systems Biology in Reproductive Medicine 68:4, pages 258-271.
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Marta Gòdia, Fabiana Quoos Mayer, Julieta Nafissi, Anna Castelló, Joan Enric Rodríguez-Gil, Armand Sánchez & Alex Clop. (2018) A technical assessment of the porcine ejaculated spermatozoa for a sperm-specific RNA-seq analysis. Systems Biology in Reproductive Medicine 64:4, pages 291-303.
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Shihong Mao, Edward Sendler, Robert J. Goodrich, Russ Hauser & Stephen A. Krawetz. (2014) A comparison of sperm RNA-seq methods. Systems Biology in Reproductive Medicine 60:5, pages 308-315.
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Saurabh Tiwari, Abdallah Shahat, John Kastelic, Nehal Thakor & Jacob Thundathil. (2023) Optimized total RNA isolation from bovine sperm with enhanced sperm head lysis. Biochemistry and Cell Biology.
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S. Selvaraju, L. Ramya, D. Swathi, S. Parthipan, S. S. Archana, B. K. Binsila, B. Krishnappa & A. Arangasamy. 2022. Frontier Technologies in Bovine Reproduction. Frontier Technologies in Bovine Reproduction 133 146 .
Joana Santiago, Joana V Silva, John Howl, Manuel A S Santos & Margarida Fardilha. (2022) All you need to know about sperm RNAs. Human Reproduction Update 28:1, pages 67-91.
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Ying Feng, Ruohan Wang, Dongmei Su, Yujia Zhai, Lin Wang, Lin Yu, Yan Zhang, Xue Ma & Fang Ma. (2021) Identifying new sperm Western blot loading controls. Andrologia 53:11.
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Yu Lian, Marta Gòdia, Anna Castello, Joan Enric Rodriguez-Gil, Sam Balasch, Armand Sanchez & Alex Clop. (2021) Characterization of the Impact of Density Gradient Centrifugation on the Profile of the Pig Sperm Transcriptome by RNA-Seq. Frontiers in Veterinary Science 8.
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C Corral-Vazquez, J Blanco, R Aiese Cigliano, Z Sarrate, R Rivera-Egea, F Vidal, N Garrido, C Daub & E Anton. (2021) The RNA content of human sperm reflects prior events in spermatogenesis and potential post-fertilization effects. Molecular Human Reproduction 27:6.
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Asli Metin Mahmutoglu, Sezgin Gunes, Ramazan Asci, Ralf Henkel & Oguz Aydin. (2020) Association of XRCC1 and ERCC2 promoters’ methylation with chromatin condensation and sperm DNA fragmentation in idiopathic oligoasthenoteratozoospermic men . Andrologia 53:2.
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Yu H. Sun, Anqi Wang, Chi Song, Goutham Shankar, Rajesh K. Srivastava, Kin Fai Au & Xin Zhiguo Li. (2021) Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm. Nature Communications 12:1.
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Bijayalaxmi Sahoo, Praveen Kumar Guttula & Mukesh Kumar Gupta. (2021) Comparison of spermatozoal RNA extraction methods in goats. Analytical Biochemistry 614, pages 114059.
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Berliana Hamidah, Ashon Sa'adi & Rina Yudiwati. (2020) Human Sperm Cells After Purification Using SCLB Can Be Stored at 4o, -20o, or -80oC Before Small RNA Isolation. INDONESIAN JOURNAL OF CLINICAL PATHOLOGY AND MEDICAL LABORATORY 26:2, pages 134-137.
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Delia Tomoiaga, Vanessa Aguiar-Pulido, Shristi Shrestha, Paul Feinstein, Shawn E. Levy, Christopher E. Mason & Jeffrey A. Rosenfeld. (2020) Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder. npj Genomic Medicine 5:1.
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Grace M. Swanson, Sergey Moskovtsev, Clifford Librach, J. Richard Pilsner, Robert Goodrich & Stephen A. Krawetz. (2020) What human sperm RNA-Seq tells us about the microbiome. Journal of Assisted Reproduction and Genetics 37:2, pages 359-368.
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Enrica Bianchi, Kim Boekelheide, Mark Sigman, Joseph M. Braun, Melissa Eliot, Susan J. Hall, Edward Dere & Kathleen Hwang. (2019) Spermatozoal large RNA content is associated with semen characteristics, sociodemographic and lifestyle factors. PLOS ONE 14:5, pages e0216584.
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Rani Singh, Vivek Junghare, Saugata Hazra, Umesh Singh, Gyanendra Singh Sengar, T.V. Raja, Sushil Kumar, Shrikant Tyagi, A.K. Das, Ashish Kumar, Prakash Koringa, Subhash Jakhesara, C.J. Joshi & Rajib Deb. (2019) Database on spermatozoa transcriptogram of catagorised Frieswal crossbred (Holstein Friesian X Sahiwal) bulls. Theriogenology 129, pages 130-145.
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Ferran Barrachina, Meritxell Jodar, David Delgado-Dueñas, Ada Soler-Ventura, Josep Maria Estanyol, Carme Mallofré, Josep Lluís Ballescà & Rafael Oliva. (2019) Stable-protein Pair Analysis as A Novel Strategy to Identify Proteomic Signatures: Application To Seminal Plasma From Infertile Patients. Molecular & Cellular Proteomics 18, pages S77-S90.
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Vanmathy Kasimanickam & Ramanathan Kasimanickam. (2019) An Efficient Approach for RNA Extraction from Boar Sperm and Seminal Plasma. BIO-PROTOCOL 9:13.
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Marta Gòdia, Grace Swanson & Stephen A Krawetz. (2018) A history of why fathers’ RNA matters†. Biology of Reproduction 99:1, pages 147-159.
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Brandon L Pearson, Leonie P Posselt, Kristin S Henzel & Dan Ehninger. (2018) Limited efficacy of somatic cell lysis buffer to purify laboratory mouse sperm. Epigenomics 10:6, pages 689-694.
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E. Bianchi, A. Stermer, K. Boekelheide, M. Sigman, S. J. Hall, G. Reyes, E. Dere & K. Hwang. (2018) High‐quality human and rat spermatozoal RNA isolation for functional genomic studies . Andrology 6:2, pages 374-383.
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Kristian R. von Schalburg, Brent E. Gowen, Jong S. Leong, Eric B. Rondeau, William S. Davidson & Ben F. Koop. (2017) Subcellular localization and characterization of estrogenic pathway regulators and mediators in Atlantic salmon spermatozoal cells. Histochemistry and Cell Biology 149:1, pages 75-96.
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S. El Fekih, M.-H. Nguyen, A. Perrin, D. Beauvillard, F. Morel, A. Saad, H. Ben Ali & M. De Braekeleer. (2017) Sperm RNA preparation for transcriptomic analysis: Review of the techniques and personal experience. Andrologia 49:10, pages e12767.
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Meritxell JodarEdward SendlerSergey I. MoskovtsevClifford L. LibrachRobert GoodrichSonja SwansonRuss HauserMichael P. DiamondStephen A. Krawetz. (2016) Response to Comment on “Absence of sperm RNA elements correlates with idiopathic male infertility”. Science Translational Medicine 8:353.
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Meritxell Jodar, Edward Sendler & Stephen A. Krawetz. (2015) The protein and transcript profiles of human semen. Cell and Tissue Research 363:1, pages 85-96.
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Graham D. Johnson, Paula Mackie, Meritxell Jodar, Sergey Moskovtsev & Stephen A. Krawetz. (2015) Chromatin and extracellular vesicle associated sperm RNAs. Nucleic Acids Research 43:14, pages 6847-6859.
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Sivashanmugam Parthipan, Sellappan Selvaraju, Lakshminarayana Somashekar, Atul P. Kolte, Arunachalam Arangasamy & Janivara Parameswaraiah Ravindra. (2015) Spermatozoa input concentrations and RNA isolation methods on RNA yield and quality in bull (Bos taurus). Analytical Biochemistry 482, pages 32-39.
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Meritxell JodarEdward SendlerSergey I. MoskovtsevClifford L. LibrachRobert GoodrichSonja SwansonRuss HauserMichael P. DiamondStephen A. Krawetz. (2015) Absence of sperm RNA elements correlates with idiopathic male infertility. Science Translational Medicine 7:295.
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