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Biofuels Volume 1, 2010 - Issue 2
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Review

Trichoderma reesei: genetic approaches to improving strain efficiency

Verena Seidl Research Area Gene Technology & Applied Biochemistry, Institute of Chemical Engineering, Vienna University of Technology. Getreidemarkt 9/166-5, 1060 Vienna, Austria. [email protected]
&
Bernhard Seiboth Research Area Gene Technology & Applied Biochemistry, Institute of Chemical Engineering, Vienna University of Technology. Getreidemarkt 9/166-5, 1060 Vienna, Austria. [email protected]
Pages 343-354 | Published online: 09 Apr 2014

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Kevin McCluskey & Scott E. Baker. (2017) Diverse data supports the transition of filamentous fungal model organisms into the post-genomics era. Mycology 8:2, pages 67-83.
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Guodong Liu, Yuqi Qin, Zhonghai Li & Yinbo Qu. (2013) Improving lignocellulolytic enzyme production with Penicillium: from strain screening to systems biology. Biofuels 4:5, pages 523-534.
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Pinaki Dey, Vivek Rangarajan, Joginder Singh, Jayato Nayak & Kevin Joseph Dilip. (2021) Current perspective on improved fermentative production and purification of fungal cellulases for successful biorefinery applications: a brief review. Biomass Conversion and Biorefinery 12:3, pages 967-995.
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Sabrina Beier, Marlene Stiegler, Eva Hitzenhammer & Monika Schmoll. (2022) Screening for genes involved in cellulase regulation by expression under the control of a novel constitutive promoter in Trichoderma reesei. Current Research in Biotechnology 4, pages 238-246.
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Hao Fang, Chaofeng Li, Jiajia Zhao & Chen Zhao. (2021) Biotechnological Advances and Trends in Engineering Trichoderma reesei towards Cellulase Hyperproducer. Biotechnology and Bioprocess Engineering 26:4, pages 517-528.
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Rajeev K. Sukumaran, Meera Christopher, Prajeesh Kooloth-Valappil, AthiraRaj Sreeja-Raju, Reshma M. Mathew, Meena Sankar, Anoop Puthiyamadam, Velayudhanpillai-Prasannakumari Adarsh, Aswathi Aswathi, Valan Rebinro, Amith Abraham & Ashok Pandey. (2021) Addressing challenges in production of cellulases for biomass hydrolysis: Targeted interventions into the genetics of cellulase producing fungi. Bioresource Technology 329, pages 124746.
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María del Carmen H. Rodríguez, Harry C. Evans, Lucas M. de Abreu, Davi M. de Macedo, Miraine K. Ndacnou, Kifle B. Bekele & Robert W. Barreto. (2021) New species and records of Trichoderma isolated as mycoparasites and endophytes from cultivated and wild coffee in Africa. Scientific Reports 11:1.
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Peijie Chen, Guan Pang, Feng Cai & Irina S. Druzhinina. 2021. Encyclopedia of Mycology. Encyclopedia of Mycology 505 517 .
Lucas Miranda Fonseca, Lucas Salera Parreiras & Mario Tyago Murakami. (2020) Rational engineering of the Trichoderma reesei RUT-C30 strain into an industrially relevant platform for cellulase production. Biotechnology for Biofuels 13:1.
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Kandasamy Saravanakumar, Anuruddhika Udayangani Rathnayake, Anbazhagan Sathiyaseelan, Vijayalakshmi Selvakumar, Mariadoss Arokia Vijaya Anand, Damilare Emmanuel Adeyemi, Kandasamy Kathiresan, Hee-Guk Byun & Myeong-Hyeon Wang. 2020. New and Future Developments in Microbial Biotechnology and Bioengineering. New and Future Developments in Microbial Biotechnology and Bioengineering 209 220 .
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Kandasamy Saravanakumar, Sabarathinam Shanmugam, Anjana Hari, Zeba Usmani, Davoodbasha Mubarak Ali, Kandasamy Kathiresan, Yevgen Karpichev, Bhim Pratap Singh, Susana Rodriguez-Couto, Myeong-Hyeon Wang & Vijai Kumar Gupta. 2020. Trichoderma: Agricultural Applications and Beyond. Trichoderma: Agricultural Applications and Beyond 325 350 .
Camille Filiatrault-Chastel, David Navarro, Mireille Haon, Sacha Grisel, Isabelle Herpoël-Gimbert, Didier Chevret, Mathieu Fanuel, Bernard Henrissat, Senta Heiss-Blanquet, Antoine Margeot & Jean-Guy Berrin. (2019) AA16, a new lytic polysaccharide monooxygenase family identified in fungal secretomes. Biotechnology for Biofuels 12:1.
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Mohammad Manjur Shah & Hamisu Afiya. 2019. Trichoderma - The Most Widely Used Fungicide. Trichoderma - The Most Widely Used Fungicide.
Gen Zou, Yanping Jiang, Rui Liu, Zhihua Zhu & Zhihua Zhou. (2018) The putative β-glucosidase BGL3I regulates cellulase induction in Trichoderma reesei. Biotechnology for Biofuels 11:1.
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Elisabeth Fitz, Franziska Wanka & Bernhard Seiboth. (2018) The Promoter Toolbox for Recombinant Gene Expression in Trichoderma reesei. Frontiers in Bioengineering and Biotechnology 6.
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Scott E. Baker. (2018) Protein hyperproduction in fungi by design. Applied Microbiology and Biotechnology 102:20, pages 8621-8628.
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E. V. Kostyleva, N. V. Tsurikova, A. S. Sereda, I. A. Velikoretskaya, T. N. Veselkina, N. S. Lobanov, I. A. Shashkov & A. P. Sinitsyn. (2018) Enhancement of Activity of Carbohydrases with Endo-depolymerase Action in Trichoderma reesei Using Mutagenesis. Microbiology 87:5, pages 652-661.
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S. Abdel-lateif Khalid. (2017) Trichoderma as biological control weapon against soil borne plant pathogens. African Journal of Biotechnology 16:50, pages 2299-2306.
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Simo Ellilä, Lucas Fonseca, Cristiane Uchima, Junio Cota, Gustavo Henrique Goldman, Markku Saloheimo, Vera Sacon & Matti Siika-aho. (2017) Development of a low-cost cellulase production process using Trichoderma reesei for Brazilian biorefineries. Biotechnology for Biofuels 10:1.
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Yuanchao Qian, Lixia Zhong, Jia Gao, Ningning Sun, Yifan Wang, Guoyong Sun, Yinbo Qu & Yaohua Zhong. (2017) Production of highly efficient cellulase mixtures by genetically exploiting the potentials of Trichoderma reesei endogenous cellulases for hydrolysis of corncob residues. Microbial Cell Factories 16:1.
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Peng Cheng, Bo Liu, Yi Su, Yao Hu, Yahui Hong, Xinxin Yi, Lei Chen, Shengying Su, Jeffrey S. C. Chu, Nansheng Chen & Xingyao Xiong. (2017) Genomics insights into different cellobiose hydrolysis activities in two Trichoderma hamatum strains. Microbial Cell Factories 16:1.
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Ikram ul Haq & Fatima Akram. (2017) Enhanced Production of a Recombinant Multidomain Thermostable GH9 Processive Endo-1,4-β-Glucanase (CenC) from Ruminiclostridium thermocellum in a Mesophilic Host Through Various Cultivation and Induction Strategies. Applied Biochemistry and Biotechnology 183:1, pages 171-188.
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Thanh Tung Lai, Thi Thanh Ha Pham, Kokou Adjallé, Daniel Montplaisir, François Brouillette & Simon Barnabé. (2016) Production of Trichoderma Reesei RUT C-30 Lignocellulolytic Enzymes Using Paper Sludge as Fermentation Substrate: An Approach for On-Site Manufacturing of Enzymes for Biorefineries. Waste and Biomass Valorization 8:4, pages 1081-1088.
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Morgann C. Reilly, Jon K. Magnuson & Scott E. Baker. (2016) Approaches to understanding protein hypersecretion in fungi. Fungal Biology Reviews 30:4, pages 145-151.
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Yuanchao Qian, Lixia Zhong, Yunhua Hou, Yinbo Qu & Yaohua Zhong. (2016) Characterization and Strain Improvement of a Hypercellulytic Variant, Trichoderma reesei SN1, by Genetic Engineering for Optimized Cellulase Production in Biomass Conversion Improvement. Frontiers in Microbiology 7.
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Anastasia P. Galanopoulou & Dimitris G. Hatzinikolaou. 2016. Fungal Applications in Sustainable Environmental Biotechnology. Fungal Applications in Sustainable Environmental Biotechnology 275 305 .
Anna Gryshyna, Liisa Kautto, Robyn Peterson & Helena Nevalainen. 2016. Gene Expression Systems in Fungi: Advancements and Applications. Gene Expression Systems in Fungi: Advancements and Applications 441 457 .
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Koutarou Hayata, Seiya Asada, Tatsuya Fujii, Hiroyuki Inoue, Kazuhiko Ishikawa & Shigeki Sawayama. (2014) Gene Targeting by RNAi-Mediated Knockdown of Potent DNA Ligase IV Homologue in the Cellulase-Producing Fungus Talaromyces cellulolyticus. Applied Biochemistry and Biotechnology 174:5, pages 1697-1704.
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Xiuzhen Chen, Yingfeng Luo, Hongtao Yu, Yuhui Sun, Hong Wu, Shuhui Song, Songnian Hu & Zhiyang Dong. (2014) Transcriptional profiling of biomass degradation-related genes during Trichoderma reesei growth on different carbon sources. Journal of Biotechnology 173, pages 59-64.
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Jun Huang, Dong Chen, Yutuo Wei, Qingyan Wang, Zhenchong Li, Ying Chen & Ribo Huang. (2014) Direct Ethanol Production from Lignocellulosic Sugars and Sugarcane Bagasse by a Recombinant Trichoderma reesei Strain HJ48 . The Scientific World Journal 2014, pages 1-8.
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Vijai K. Gupta, Anthonia O’Donovan, Maria G. Tuohy & Gauri Dutt Sharma. 2014. Biotechnology and Biology of Trichoderma. Biotechnology and Biology of Trichoderma 325 336 .
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Hideaki Koike, Andrea Aerts, Kurt LaButti, Igor V. Grigoriev & Scott E. Baker. (2013) Comparative Genomics Analysis of Trichoderma reesei Strains . Industrial Biotechnology 9:6, pages 352-367.
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Takuya Noguchi, Yukihiro Tashiro, Tsuyoshi Yoshida, Jin Zheng, Kenji Sakai & Kenji Sonomoto. (2013) Efficient butanol production without carbon catabolite repression from mixed sugars with Clostridium saccharoperbutylacetonicum N1-4. Journal of Bioscience and Bioengineering 116:6, pages 716-721.
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Christian P. Kubicek. (2013) Systems biological approaches towards understanding cellulase production by Trichoderma reesei. Journal of Biotechnology 163:2, pages 133-142.
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Fabrizio Sibilla & Pablo Domínguez de María. 2013. The Role of Catalysis for the Sustainable Production of Bio-fuels and Bio-chemicals. The Role of Catalysis for the Sustainable Production of Bio-fuels and Bio-chemicals 445 466 .
Daniela A. Ribeiro, Júnio Cota, Thabata M. Alvarez, Fernanda Brüchli, Juliano Bragato, Beatriz M. P. Pereira, Bianca A. Pauletti, George Jackson, Maria T. B. Pimenta, Mario T. Murakami, Marli Camassola, Roberto Ruller, Aldo J. P. Dillon, Jose G. C. Pradella, Adriana F. Paes Leme & Fabio M. Squina. (2012) The Penicillium echinulatum Secretome on Sugar Cane Bagasse. PLoS ONE 7:12, pages e50571.
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Mehdi Dashtban & Wensheng Qin. (2012) Overexpression of an exotic thermotolerant β-glucosidase in trichoderma reesei and its significant increase in cellulolytic activity and saccharification of barley straw. Microbial Cell Factories 11:1, pages 63.
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Benjamin Metz, Verena Seidl-Seiboth, Thomas Haarmann, Alexeij Kopchinskiy, Patrick Lorenz, Bernhard Seiboth & Christian P. Kubicek. (2011) Expression of Biomass-Degrading Enzymes Is a Major Event during Conidium Development in Trichoderma reesei. Eukaryotic Cell 10:11, pages 1527-1535.
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Lea Atanasova, Walter M. Jaklitsch, Monika Komoń-Zelazowska, Christian P. Kubicek & Irina S. Druzhinina. (2010) Clonal Species Trichoderma parareesei sp. nov. Likely Resembles the Ancestor of the Cellulase Producer Hypocrea jecorina / T. reesei . Applied and Environmental Microbiology 76:21, pages 7259-7267.
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