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Cell cycle control (and more) by programmed −1 ribosomal frameshifting: implications for disease and therapeutics

Ashton T BelewDepartment of Cell Biology and Molecular Genetics; University of Maryland; College Park, MDUSA

Jonathan D DinmanDepartment of Cell Biology and Molecular Genetics; University of Maryland; College Park, MDUSACorrespondence[email protected]

Pages 172-178 | Received 07 Oct 2014, Accepted 14 Nov 2014, Published online: 21 Jan 2015

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https://doi.org/10.4161/15384101.2014.989123
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Panagiotis Poulis, Anoshi Patel, Marina V. Rodnina & Sarah Adio. (2022) Altered tRNA dynamics during translocation on slippery mRNA as determinant of spontaneous ribosome frameshifting. Nature Communications 13:1.
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Yousuf A. Khan, Gary Loughran, Anna-Lena Steckelberg, Katherine Brown, Stephen J. Kiniry, Hazel Stewart, Pavel V. Baranov, Jeffrey S. Kieft, Andrew E. Firth & John F. Atkins. (2022) Evaluating ribosomal frameshifting in CCR5 mRNA decoding. Nature 604:7906, pages E16-E23.
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Krishna Neupane, Meng Zhao, Aaron Lyons, Sneha Munshi, Sandaru M. Ileperuma, Dustin B. Ritchie, Noel Q. Hoffer, Abhishek Narayan & Michael T. Woodside. (2021) Structural dynamics of single SARS-CoV-2 pseudoknot molecules reveal topologically distinct conformers. Nature Communications 12:1.
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Sawsan Napthine, Chris H. Hill, Holly C. M. Nugent & Ian Brierley. (2021) Modulation of Viral Programmed Ribosomal Frameshifting and Stop Codon Readthrough by the Host Restriction Factor Shiftless. Viruses 13:7, pages 1230.
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Irina Malinova, Arkadiusz Zupok, Amid Massouh, Mark Aurel Schöttler, Etienne H Meyer, Liliya Yaneva-Roder, Witold Szymanski, Margit Rößner, Stephanie Ruf, Ralph Bock & Stephan Greiner. (2021) Correction of Frameshift Mutations in the atpB Gene by Translational Recoding in Chloroplasts of Oenothera and Tobacco . The Plant Cell.
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Krishna Neupane, Sneha Munshi, Meng Zhao, Dustin B. Ritchie, Sandaru M. Ileperuma & Michael T. Woodside. (2020) Anti-Frameshifting Ligand Active against SARS Coronavirus-2 Is Resistant to Natural Mutations of the Frameshift-Stimulatory Pseudoknot. Journal of Molecular Biology 432:21, pages 5843-5847.
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Bohdan Ostash & Maria Anisimova. 2020. Statistical Modelling and Machine Learning Principles for Bioinformatics Techniques, Tools, and Applications. Statistical Modelling and Machine Learning Principles for Bioinformatics Techniques, Tools, and Applications 213 288 .

Matthew T. J. Halma, Dustin B. Ritchie, Tonia R. Cappellano, Krishna Neupane & Michael T. Woodside. (2019) Complex dynamics under tension in a high-efficiency frameshift stimulatory structure. Proceedings of the National Academy of Sciences 116:39, pages 19500-19505.
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Xinlu Wang, Yifang Xuan, Yuling Han, Xiang Ding, Kai Ye, Fuquan Yang, Pu Gao, Stephen P. Goff & Guangxia Gao. (2019) Regulation of HIV-1 Gag-Pol Expression by Shiftless, an Inhibitor of Programmed -1 Ribosomal Frameshifting. Cell 176:3, pages 625-635.e14.
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Victor Garcia, Stefan Zoller & Maria Anisimova. (2018) Accounting for Programmed Ribosomal Frameshifting in the Computation of Codon Usage Bias Indices. G3 Genes|Genomes|Genetics 8:10, pages 3173-3183.
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Thomas E. Dever, Jonathan D. Dinman & Rachel Green. (2018) Translation Elongation and Recoding in Eukaryotes. Cold Spring Harbor Perspectives in Biology 10:8, pages a032649.
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Homa Ghalei, Juliette Trepreau, Jason C. Collins, Hari Bhaskaran, Bethany S. Strunk & Katrin Karbstein. (2017) The ATPase Fap7 Tests the Ability to Carry Out Translocation-like Conformational Changes and Releases Dim1 during 40S Ribosome Maturation. Molecular Cell 67:6, pages 990-1000.e3.
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Yi HeHuizhi ZengYang YuJiashu ZhangXiaona ZengFengtao GongQi LiuBo Yang. (2017) Resveratrol Improves Cell Cycle Arrest in Chronic Prostatitis Rats, by C-kit/SCF Suppression . DNA and Cell Biology 36:8, pages 709-714.
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Thomas A. Hilimire, Jeffrey M. Chamberlain, Viktoriya Anokhina, Ryan P. Bennett, Oliver Swart, Jason R. Myers, John M. Ashton, Ryan A. Stewart, Aaron L. Featherston, Kathleen Gates, Eric D. Helms, Harold C. Smith, Stephen Dewhurst & Benjamin L. Miller. (2017) HIV-1 Frameshift RNA-Targeted Triazoles Inhibit Propagation of Replication-Competent and Multi-Drug-Resistant HIV in Human Cells. ACS Chemical Biology 12:6, pages 1674-1682.
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Benjamin L. Miller. 2018. RNA Therapeutics. RNA Therapeutics 17 45 .

John F. Atkins, Gary Loughran, Pramod R. Bhatt, Andrew E. Firth & Pavel V. Baranov. (2016) Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use. Nucleic Acids Research, pages gkw530.
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Sawsan Napthine, Emmely E. Treffers, Susanne Bell, Ian Goodfellow, Ying Fang, Andrew E. Firth, Eric J. Snijder & Ian Brierley. (2016) A novel role for poly(C) binding proteins in programmed ribosomal frameshifting. Nucleic Acids Research 44:12, pages 5491-5503.
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Thomas A. Hilimire, Ryan P. Bennett, Ryan A. Stewart, Pablo Garcia-Miranda, Alex Blume, Jordan Becker, Nathan Sherer, Eric D. Helms, Samuel E. Butcher, Harold C. Smith & Benjamin L. Miller. (2015) N -Methylation as a Strategy for Enhancing the Affinity and Selectivity of RNA-binding Peptides: Application to the HIV-1 Frameshift-Stimulating RNA . ACS Chemical Biology 11:1, pages 88-94.
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Neva Caliskan, Frank Peske & Marina V. Rodnina. (2015) Changed in translation: mRNA recoding by −1 programmed ribosomal frameshifting. Trends in Biochemical Sciences 40:5, pages 265-274.
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Cell cycle control (and more) by programmed −1 ribosomal frameshifting: implications for disease and therapeutics

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Cell cycle control (and more) by programmed −1 ribosomal frameshifting: implications for disease and therapeutics

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