Citations (38)
Keep up to date with the latest research on this topic with citation updates for this article.
Read on this site (4)
Leandro Lucero, Camille Fonouni-Farde, Martin Crespi & Federico Ariel. (2020) Long noncoding RNAs shape transcription in plants. Transcription 11:3-4, pages 160-171.
Read now
Read now
Anna Vilborg & Joan A. Steitz. (2017) Readthrough transcription: How are DoGs made and what do they do?. RNA Biology 14:5, pages 632-636.
Read now
Read now
Thomas Schubert & Gernot Längst. (2013) Changes in higher order structures of chromatin by RNP complexes. RNA Biology 10:2, pages 175-179.
Read now
Read now
Moritz Eißmann, Tony Gutschner, Monika Hämmerle, Stefan Günther, Maïwen Caudron-Herger, Matthias Groß, Peter Schirmacher, Karsten Rippe, Thomas Braun, Martin Zörnig & Sven Diederichs. (2012) Loss of the abundant nuclear non-coding RNA MALAT1 is compatible with life and development. RNA Biology 9:8, pages 1076-1087.
Read now
Read now
Articles from other publishers (34)
Rodrigo Maldonado & Gernot Längst. (2023) The chromatin – triple helix connection. Biological Chemistry 404:11-12, pages 1037-1049.
Crossref
Crossref
Long Gu, Min Li, Caroline M. Li, Pouya Haratipour, Robert Lingeman, Jennifer Jossart, Margarita Gutova, Linda Flores, Caitlyn Hyde, Nikola Kenjić, Haiqing Li, Vincent Chung, Hongzhi Li, Brett Lomenick, Daniel D. Von Hoff, Timothy W. Synold, Karen S. Aboody, Yilun Liu, David Horne, Robert J. Hickey, J. Jefferson P. Perry & Linda H. Malkas. (2023) Small molecule targeting of transcription-replication conflict for selective chemotherapy. Cell Chemical Biology 30:10, pages 1235-1247.e6.
Crossref
Crossref
Peiguo Shi, Michael R. Murphy, Alexis O. Aparicio, Jordan S. Kesner, Zhou Fang, Ziheng Chen, Aditi Trehan, Yang Guo & Xuebing Wu. (2023) Collateral activity of the CRISPR/RfxCas13d system in human cells. Communications Biology 6:1.
Crossref
Crossref
Heather J. Kolpa, Kevin M. Creamer, Lisa L. Hall & Jeanne B. Lawrence. (2021) SAF-A mutants disrupt chromatin structure through dominant negative effects on RNAs associated with chromatin. Mammalian Genome 33:2, pages 366-381.
Crossref
Crossref
Sofia A. Quinodoz & Mitchell Guttman. (2022) Essential Roles for RNA in Shaping Nuclear Organization. Cold Spring Harbor Perspectives in Biology 14:5, pages a039719.
Crossref
Crossref
Thomas Roulé, Aurelie Christ, Nosheen Hussain, Ying Huang, Caroline Hartmann, Moussa Benhamed, Jose Gutierrez-Marcos, Federico Ariel, Martin Crespi & Thomas Blein. (2022) The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA. Molecular Plant 15:5, pages 840-856.
Crossref
Crossref
Irene Farabella, Marco Di Stefano, Paula Soler-Vila, Maria Marti-Marimon & Marc A. Marti-Renom. (2021) Three-dimensional genome organization via triplex-forming RNAs. Nature Structural & Molecular Biology 28:11, pages 945-954.
Crossref
Crossref
Kevin Michael Creamer, Heather Jill Kolpa & Jeanne Bentley Lawrence. (2021) Nascent RNA scaffolds contribute to chromosome territory architecture and counter chromatin compaction. Molecular Cell 81:17, pages 3509-3525.e5.
Crossref
Crossref
Sergey V. Razin & Alexey A. Gavrilov. (2021) Non-coding RNAs in chromatin folding and nuclear organization. Cellular and Molecular Life Sciences 78:14, pages 5489-5504.
Crossref
Crossref
Mattia Marenda, Elena Lazarova, Sebastian van de Linde, Nick Gilbert & Davide Michieletto. (2021) Parameter-free molecular super-structures quantification in single-molecule localization microscopy. Journal of Cell Biology 220:5.
Crossref
Crossref
Lukas Frank & Karsten Rippe. (2020) Repetitive RNAs as Regulators of Chromatin-Associated Subcompartment Formation by Phase Separation. Journal of Molecular Biology.
Crossref
Crossref
A Rasim Barutcu, Benjamin J Blencowe & John L Rinn. (2019)
Differential contribution of steady‐state
RNA
and active transcription in chromatin organization
. EMBO reports 20:10.
Crossref
Crossref
Rositsa Dueva, Karen Akopyan, Chiara Pederiva, Davide Trevisan, Soniya Dhanjal, Arne Lindqvist & Marianne Farnebo. (2019) Neutralization of the Positive Charges on Histone Tails by RNA Promotes an Open Chromatin Structure. Cell Chemical Biology 26:10, pages 1436-1449.e5.
Crossref
Crossref
Davide Michieletto & Nick Gilbert. (2019) Role of nuclear RNA in regulating chromatin structure and transcription. Current Opinion in Cell Biology 58, pages 120-125.
Crossref
Crossref
Nevcin Sentürk Cetin, Chao-Chung Kuo, Teodora Ribarska, Ronghui Li, Ivan G Costa & Ingrid Grummt. (2019) Isolation and genome-wide characterization of cellular DNA:RNA triplex structures. Nucleic Acids Research 47:5, pages 2306-2321.
Crossref
Crossref
Antoine Aze, Michalis Fragkos, Stéphane Bocquet, Julien Cau & Marcel Méchali. (2017) RNAs coordinate nuclear envelope assembly and DNA replication through ELYS recruitment to chromatin. Nature Communications 8:1.
Crossref
Crossref
K. M. Creamer & J. B. Lawrence. (2017)
XIST
RNA: a window into the broader role of RNA in nuclear chromosome architecture
. Philosophical Transactions of the Royal Society B: Biological Sciences 372:1733, pages 20160360.
Crossref
Crossref
Teresa Pankert, Thibaud Jegou, Maïwen Caudron-Herger & Karsten Rippe. (2017) Tethering RNA to chromatin for fluorescence microscopy based analysis of nuclear organization. Methods 123, pages 89-101.
Crossref
Crossref
Stefan F. Pinter. (2016) A Tale of Two Cities: How Xist and its partners localize to and silence the bicompartmental X. Seminars in Cell & Developmental Biology 56, pages 19-34.
Crossref
Crossref
Yicong Meng, Xianfu Yi, Xinhui Li, Chuansheng Hu, Ju Wang, Ling Bai, Daniel M. Czajkowsky & Zhifeng Shao. (2016) The non-coding RNA composition of the mitotic chromosome by 5′-tag sequencing. Nucleic Acids Research 44:10, pages 4934-4946.
Crossref
Crossref
James R. DavieWayne XuGenevieve P. Delcuve. (2016) Histone H3K4 trimethylation: dynamic interplay with pre-mRNA splicing. Biochemistry and Cell Biology 94:1, pages 1-11.
Crossref
Crossref
Genevieve P. Delcuve, Dilshad H. Khan, Vichithra R. B. Liyanage, Sanzida Jahan, Mojgan Rastegar, Lorrie A. Kirshenbaum & James R. Davie. 2016. Epigenetics in Cardiac Disease. Epigenetics in Cardiac Disease
1
35
.
Maïwen Caudron‐Herger, Teresa Pankert, Jeanette Seiler, Attila Németh, Renate Voit, Ingrid Grummt & Karsten Rippe. (2015)
Alu
element‐containing
RNA
s maintain nucleolar structure and function
. The EMBO Journal 34:22, pages 2758-2774.
Crossref
Crossref
Fabien Dupuis-Sandoval, Mikaël Poirier & Michelle S. Scott. (2015) The emerging landscape of small nucleolar RNAs in cell biology. Wiley Interdisciplinary Reviews: RNA 6:4, pages 381-397.
Crossref
Crossref
Georges St. Laurent, Claes Wahlestedt & Philipp Kapranov. (2015) The Landscape of long noncoding RNA classification. Trends in Genetics 31:5, pages 239-251.
Crossref
Crossref
Min Li, Subhash Pokharel, Jiin-Tarng Wang, Xiaohua Xu & Yilun Liu. (2015) RECQ5-dependent SUMOylation of DNA topoisomerase I prevents transcription-associated genome instability. Nature Communications 6:1.
Crossref
Crossref
Nupur Bhattacharya, Michaela Reichenzeller, Maiwen Caudron-Herger, Sarah Haebe, Nathan Brady, Susanne Diener, Maria Nothing, Hartmut Döhner, Stephan Stilgenbauer, Karsten Rippe & Daniel Mertens. (2015) Loss of cooperativity of secreted CD40L and increased dose-response to IL4 on CLL cell viability correlates with enhanced activation of NF-kB and STAT6. International Journal of Cancer 136:1, pages 65-73.
Crossref
Crossref
Dilshad H. Khan, Carolina Gonzalez, Charlton Cooper, Jian-Min Sun, Hou Yu Chen, Shannon Healy, Wayne Xu, Karen T. Smith, Jerry L. Workman, Etienne Leygue & James R. Davie. (2014) RNA-dependent dynamic histone acetylation regulates MCL1 alternative splicing. Nucleic Acids Research 42:3, pages 1656-1670.
Crossref
Crossref
Ashwat Visvanathan, Kashif Ahmed, Liron Even-Faitelson, David Lleres, David P. Bazett-Jones & Angus I. Lamond. (2013) Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations. PLoS ONE 8:6, pages e67689.
Crossref
Crossref
Angela Garding, Nupur Bhattacharya, Rainer Claus, Melanie Ruppel, Cordula Tschuch, Katharina Filarsky, Irina Idler, Manuela Zucknick, Maïwen Caudron-Herger, Christopher Oakes, Verena Fleig, Ioanna Keklikoglou, Danilo Allegra, Leticia Serra, Sudhir Thakurela, Vijay Tiwari, Dieter Weichenhan, Axel Benner, Bernhard Radlwimmer, Hanswalter Zentgraf, Stefan Wiemann, Karsten Rippe, Christoph Plass, Hartmut Döhner, Peter Lichter, Stephan Stilgenbauer & Daniel Mertens. (2013) Epigenetic Upregulation of lncRNAs at 13q14.3 in Leukemia Is Linked to the In Cis Downregulation of a Gene Cluster That Targets NF-kB. PLoS Genetics 9:4, pages e1003373.
Crossref
Crossref
Vladimir B Teif, Yevhen Vainshtein, Maïwen Caudron-Herger, Jan-Philipp Mallm, Caroline Marth, Thomas Höfer & Karsten Rippe. (2012) Genome-wide nucleosome positioning during embryonic stem cell development. Nature Structural & Molecular Biology 19:11, pages 1185-1192.
Crossref
Crossref
Thomas Schubert, Miriam Caroline Pusch, Sarah Diermeier, Vladimir Benes, Elisabeth Kremmer, Axel Imhof & Gernot Längst. (2012) Df31 Protein and snoRNAs Maintain Accessible Higher-Order Structures of Chromatin. Molecular Cell 48:3, pages 434-444.
Crossref
Crossref
Ma?wen Caudron-Herger & Karsten Rippe. (2012) Nuclear architecture by RNA. Current Opinion in Genetics & Development 22:2, pages 179-187.
Crossref
Crossref
Qian-Hao Zhu & Ming-Bo Wang. (2012) Molecular Functions of Long Non-Coding RNAs in Plants. Genes 3:1, pages 176-190.
Crossref
Crossref