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Prion Volume 1, 2007 - Issue 4
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Technical Report

Screening of DNA Aptamer Against Mouse Prion Protein by Competitive Selection

Daisuke Ogasawara Tokyo University of Agriculture and Technology
,
Hijiri Hasegawa Tokyo University of Agriculture and Technology
,
Kiyotoshi Kaneko Tokyo medical university
,
Koji Sode Tokyo University of Agriculture and Technology
&
Kazunori Ikebukuro Tokyo University of Agriculture and Technology
Pages 248-254 | Received 30 Nov 2007, Accepted 25 Feb 2008, Published online: 02 Apr 2008

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Kazuyoshi Murakami, Fumiko Nishikawa, Ken Noda, Takashi Yokoyama & Satoshi Nishikawa. (2008) Anti-bovine Prion protein RNA aptamer containing tandem GGA repeat interacts both with recombinant bovine prion protein and its β isoform with high affinity. Prion 2:2, pages 73-80.
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Articles from other publishers (34)

Anuj Nehra, R.S. Kundu, Sweeti Ahlawat, Krishna Pal Singh, Kanchan Karki, Aryan Singh Lather, Kanika Poonia, Savita Budania & Vinay Kumar. (2023) Current trends in biosensors for the detection of cattle diseases worldwide. Biosensors and Bioelectronics: X 14, pages 100355.
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Islauddin Khan, Kumari Preeti, Valencia Fernandes, Dharmendra Kumar Khatri & Shashi Bala Singh. (2021) Role of MicroRNAs, Aptamers in Neuroinflammation and Neurodegenerative Disorders. Cellular and Molecular Neurobiology 42:7, pages 2075-2095.
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Kauser Banu, Bhairab Mondal, Bhawana Rai, N. Monica & Raju Hanumegowda. (2022) Prospects for the application of aptamer based assay platforms in pathogen detection. Biocybernetics and Biomedical Engineering 42:3, pages 934-949.
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Lamees Jamal Talib, Basma Talib Al-Sudani & Mustafa Ghazi Al-Abbassi. (2022) Aptamer Validation by Western Blot–an overview. Al Mustansiriyah Journal of Pharmaceutical Sciences 20:4, pages 122-131.
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Xu Wang, Yan Yang, Yingai Yin, Ni Zeng, Yiyang Dong, Jiahui Liu, Lei Wang, Zheng Yang & Chunsheng Yang. (2022) High-Throughput Aptamer Microarrays for Fluorescent Detection of Multiple Organophosphorus Pesticides in Food. Analytical Chemistry 94:7, pages 3173-3179.
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Kazuma Murakami, Naotaka Izuo & Gal Bitan. (2022) Aptamers targeting amyloidogenic proteins and their emerging role in neurodegenerative diseases. Journal of Biological Chemistry 298:1, pages 101478.
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Алексей Антипин, Aleksey Antipin, Григорий Надточей & Grigoriy Nadtochey. (2019) Detection of prion protein, the infection agent of bovine spongiform encephalopathy, by using aptamers. Russian veterinary journal 2019:6, pages 5-8.
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Nataly Kacherovsky, Ian I. Cardle, Emmeline L. Cheng, Jonathan L. Yu, Michael L. Baldwin, Stephen J. Salipante, Michael C. Jensen & Suzie H. Pun. (2019) Traceless aptamer-mediated isolation of CD8+ T cells for chimeric antigen receptor T-cell therapy. Nature Biomedical Engineering 3:10, pages 783-795.
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Ankita Kushwaha, Yuzuru Takamura, Koichi Nishigaki & Manish Biyani. (2019) Competitive non-SELEX for the selective and rapid enrichment of DNA aptamers and its use in electrochemical aptasensor. Scientific Reports 9:1.
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Harleen Kaur, Sonali R Bhagwat, Tarun Kumar Sharma & Amit Kumar. (2019) Analytical techniques for characterization of biological molecules – proteins and aptamers/oligonucleotides. Bioanalysis 11:2, pages 103-117.
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Yanmei Li, Leixia Meng, Kang Zou, Xiaohua Zhang & Jinhua Chen. (2018) A novel photoelectrochemical immunosensor for prion protein based on CdTe quantum dots and glucose oxidase. Journal of Electroanalytical Chemistry 829, pages 51-58.
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Xiaoyu Li, Junjing Li, Caixia Zhu, Xiaohua Zhang & Jinhua Chen. (2018) A new electrochemical immunoassay for prion protein based on hybridization chain reaction with hemin/G-quadruplex DNAzyme. Talanta 182, pages 292-298.
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Junjing Li, Xiaoxia Yan, Xiaoyu Li, Xiaohua Zhang & Jinhua Chen. (2018) A new electrochemical immunosensor for sensitive detection of prion based on Prussian blue analogue. Talanta 179, pages 726-733.
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Alix Bouvier-Müller & Frédéric Ducongé. (2018) Nucleic acid aptamers for neurodegenerative diseases. Biochimie 145, pages 73-83.
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Pascal Röthlisberger, Cécile Gasse & Marcel Hollenstein. (2017) Nucleic Acid Aptamers: Emerging Applications in Medical Imaging, Nanotechnology, Neurosciences, and Drug Delivery. International Journal of Molecular Sciences 18:11, pages 2430.
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Xiaoyu Li, Junjing Li, Yunqing Liu, Xiaohua Zhang & Jinhua Chen. (2017) A sensitive electrochemical immunosensor for prion detection based on poly- β -cyclodextrin/gold nanoparticles/glassy carbon electrode. Sensors and Actuators B: Chemical 250, pages 1-7.
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Bruno Macedo & Yraima Cordeiro. (2017) Unraveling Prion Protein Interactions with Aptamers and Other PrP-Binding Nucleic Acids. International Journal of Molecular Sciences 18:5, pages 1023.
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Jing Qu, Shuqing Yu, Yuan Zheng, Yan Zheng, Hui Yang & Jianliang Zhang. (2016) Aptamer and its applications in neurodegenerative diseases. Cellular and Molecular Life Sciences 74:4, pages 683-695.
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Abbas Ali Imani Fooladi, Mojtaba Hedayati Ch, Mohsen Amin & Jafar Amani. (2016) Applications and modifications of aptamers: potential tool for medical microbiology. Reviews in Medical Microbiology 27:3, pages 107-120.
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Maryam Tabarzad & Marzieh Jafari. (2016) Trends in the Design and Development of Specific Aptamers Against Peptides and Proteins. The Protein Journal 35:2, pages 81-99.
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Peng Yu, Xiaohua Zhang, Jiawan Zhou, Erhu Xiong, Xiaoyu Li & Jinhua Chen. (2015) Smart protein biogate as a mediator to regulate competitive host-guest interaction for sensitive ratiometric electrochemical assay of prion. Scientific Reports 5:1.
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Erin M. McConnellMatthew R. HolahanMaria C. DeRosa. (2014) Aptamers as Promising Molecular Recognition Elements for Diagnostics and Therapeutics in the Central Nervous System. Nucleic Acid Therapeutics 24:6, pages 388-404.
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Nasa Savory, Yayoi Takahashi, Kaori Tsukakoshi, Hijiri Hasegawa, Madoka Takase, Koichi Abe, Wataru Yoshida, Stefano Ferri, Shizuko Kumazawa, Koji Sode & Kazunori Ikebukuro. (2014) Simultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans by in silico maturation for biosensor development . Biotechnology and Bioengineering 111:3, pages 454-461.
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Nasa Savory, Danielle Lednor, Kaori Tsukakoshi, Koichi Abe, Wataru Yoshida, Stefano Ferri, Brian V Jones & Kazunori Ikebukuro. (2013) In silico maturation of binding-specificity of DNA aptamers against Proteus mirabilis . Biotechnology and Bioengineering 110:10, pages 2573-2580.
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Jon Ashley & Sam F.Y. Li. (2013) Three-dimensional selection of leptin aptamers using capillary electrophoresis and implications for clone validation. Analytical Biochemistry 434:1, pages 146-152.
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Sai Jin Xiao, Ping Ping Hu, Geng Fu Xiao, Yi Wang, Yue Liu & Cheng Zhi Huang. (2012) Label-Free Detection of Prion Protein with Its DNA Aptamer through the Formation of T-Hg 2+ -T Configuration . The Journal of Physical Chemistry B 116:32, pages 9565-9569.
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Saïd Taouji, Eric Dausse, Laetitia Evadé, Carmelo Di Primo, Jean-Jacques Toulmé & Eric Chevet. (2012) Advances in binder identification and characterisation: the case of oligonucleotide aptamers. New Biotechnology 29:5, pages 550-554.
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Natsuki Kobayashi, Jihoon Kim & Koji Sode. 2012. Nanomedicine and the Nervous System. Nanomedicine and the Nervous System 139 161 .
Ping Wang, Kristen L Hatcher, Jason C Bartz, Shu G Chen, Pamela Skinner, Juergen Richt, Hong Liu & Srinand Sreevatsan. (2011) Selection and characterization of DNA aptamers against PrP Sc . Experimental Biology and Medicine 236:4, pages 466-476.
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Muhammad Ali SyedSaima Pervaiz. (2010) Advances in Aptamers. Oligonucleotides 20:5, pages 215-224.
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Kaori Tsukakoshi, Ryuichi Harada, Koji Sode & Kazunori Ikebukuro. (2010) Screening of DNA aptamer which binds to α-synuclein. Biotechnology Letters 32:5, pages 643-648.
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Michael C. FlickingerAlessandra Bini, Marco Mascini & Anthony P.F. Turner. 2009. Encyclopedia of Industrial Biotechnology. Encyclopedia of Industrial Biotechnology 1 15 .
Yusuke Miyachi, Nobuaki Shimizu, Chiaki Ogino & Akihiko Kondo. (2010) Selection of DNA aptamers using atomic force microscopy. Nucleic Acids Research 38:4, pages e21-e21.
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Daisuke Ogasawara, Naomi S. Hachiya, Kiyotoshi Kaneko, Koji Sode & Kazunori Ikebukuro. (2009) Detection system based on the conformational change in an aptamer and its application to simple bound/free separation. Biosensors and Bioelectronics 24:5, pages 1372-1376.
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