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Original Articles

Molecular Modelling and Functional Studies of the Non-Stereospecific α-Haloalkanoic Acid Dehalogenase (DehE) from Rhizobium SP. RC1 and its Association with 3-Chloropropionic Acid (β-Chlorinated Aliphatic Acid)

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Pages 3725-3736 | Published online: 16 Apr 2014

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Read on this site (6)

Batool Hazim Wahhab, Habeebat Adekilekun Oyewusi, Roswanira Abdul Wahab, Mohammad Hakim Mohammad Hood, Azzmer Azzar Abdul Hamid, Marwan Salih Al-Nimer, Mohamed Faraj Edbeib, Yilmaz Kaya & Fahrul Huyop. (2023) Comparative modeling and enzymatic affinity of novel haloacid dehalogenase from Bacillus megaterium strain BHS1 isolated from alkaline Blue Lake in Turkey. Journal of Biomolecular Structure and Dynamics 0:0, pages 1-14.
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Wan-Atirah Azemin, Nadiawati Alias, Abdul Manaf Ali & Mohd Shahir Shamsir. (2023) Structural and functional characterisation of HepTH1-5 peptide as a potential hepcidin replacement. Journal of Biomolecular Structure and Dynamics 41:2, pages 681-704.
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Kalaivani Batumalaie, Mohamed Faraj Edbeib, Naji Arafat Mahat, Fahrul Huyop & Roswanira Abdul Wahab. (2018) In silico and empirical approaches toward understanding the structural adaptation of the alkaline-stable lipase KV1 from Acinetobacter haemolyticus. Journal of Biomolecular Structure and Dynamics 36:12, pages 3077-3093.
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Mohamed Faraj Abdulgader Edbeib, Roswanira Abdul Wahab & Fahrul Huyop. (2016) Characterization of an α-haloalkanoic acid–degrading Pseudomonas aeruginosa MX1 isolated from contaminated seawater. Bioremediation Journal 20:2, pages 89-97.
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Duha Alomar, Azzmer Azzar Abdul Hamid, Elham Khosrowabadi, RonnieG. Gicana, RobertJ. Lamis, Fahrul Huyop & Tengku Haziyamin Tengku Abdul Hamid. (2014) Molecular Characterization of Monochloroacetate-Degrading Arthrobacter sp. Strain D2 Isolated from Universiti Teknologi Malaysia Agricultural Area. Bioremediation Journal 18:1, pages 12-19.
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Articles from other publishers (12)

Enny Ratnaningsih & Saepulloh Saepulloh. (2022) In Silico Analysis on the Interaction of Haloacid Dehalogenase from Bacillus cereus IndB1 with 2-Chloroalkanoic Acid Substrates. The Scientific World Journal 2022, pages 1-9.
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Suleyman Faruk Kirkinci, Mohamed Faraj Edbeib, Hasan Murat Aksoy, Sevgi Marakli & Yilmaz Kaya. (2021) Identification of Dalapon degrading bacterial strain, Psychrobacter sp. TaeBurcu001 isolated from Antarctica. Polar Science 28, pages 100656.
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Raghunath Satpathy. 2021. Handbook of Research on Microbial Remediation and Microbial Biotechnology for Sustainable Soil. Handbook of Research on Microbial Remediation and Microbial Biotechnology for Sustainable Soil 373 385 .
Aliyu Adamu, Roswanira Abdul Wahab, Firdausi Aliyu, Aminu Hamza Aminu, Mariya Musa Hamza & Fahrul Huyop. (2020) Haloacid dehalogenases of Rhizobium sp. and related enzymes: Catalytic properties and mechanistic analysis. Process Biochemistry 92, pages 437-446.
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Muhammad Hasanuddin Zainal Abidin, Khairul Bariyyah Abd Halim, Fahrul Huyop, Tengku Haziyamin Tengku Abdul Hamid, Roswanira Abdul Wahab & Azzmer Azzar Abdul Hamid. (2019) The mechanistic role of active site residues in non-stereo haloacid dehalogenase E (DehE). Journal of Molecular Graphics and Modelling 90, pages 219-225.
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Thiau-Fu Ang, Jonathan Maiangwa, Abu Salleh, Yahaya Normi & Thean Leow. (2018) Dehalogenases: From Improved Performance to Potential Microbial Dehalogenation Applications. Molecules 23:5, pages 1100.
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Aliyu Adamu, Roswanira Abdul Wahab & Fahrul Huyop. (2016) l-2-Haloacid dehalogenase (DehL) from Rhizobium sp. RC1. SpringerPlus 5:1.
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Nor Hasmaliana Abdul Manas, Farah Diba Abu Bakar & Rosli Md. Illias. (2016) Computational docking, molecular dynamics simulation and subsite structure analysis of a maltogenic amylase from Bacillus lehensis G1 provide insights into substrate and product specificity. Journal of Molecular Graphics and Modelling 67, pages 1-13.
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Azzmer Azzar Abdul Hamid, Tengku Haziyamin Tengku Abdul Hamid, Roswanira Abdul Wahab, Mohd. Shahir Shamsir Omar & Fahrul Huyop. (2015) An S188V Mutation Alters Substrate Specificity of Non-Stereospecific α-Haloalkanoic Acid Dehalogenase E (DehE). PLOS ONE 10:3, pages e0121687.
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Azzmer Azzar Abdul Hamid, Tengku Haziyamin Tengku Abdul Hamid, Roswanira Abdul Wahab & Fahrul Huyop. (2015) Identification of functional residues essential for dehalogenation by the non-stereospecific α-haloalkanoic acid dehalogenase from Rhizobium sp. RC1 . Journal of Basic Microbiology 55:3, pages 324-330.
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Sonali Dhindwal, Priyanka Priyadarshini, Dipak N. Patil, Satya Tapas, Pramod Kumar, Shailly Tomar & Pravindra Kumar. (2015) Ligand-bound structures of 3-deoxy- D - manno -octulosonate 8-phosphate phosphatase from Moraxella catarrhalis reveal a water channel connecting to the active site for the second step of catalysis . Acta Crystallographica Section D Biological Crystallography 71:2, pages 239-255.
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Saeedeh Bagherbaigi, Ronnie G. Gicana, Robert J. Lamis, Mahdieh Nemati & Fahrul Huyop. (2013) Characterisation of Arthrobacter sp. S1 that can degrade α and β-haloalkanoic acids isolated from contaminated soil. Annals of Microbiology 63:4, pages 1363-1369.
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