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Letters to the Editor

Why double-stranded RNA with 5′-monophosphate is a poor binder to retinoic acid-inducible gene-I with respect to 5′-hydroxyl analogue?

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Pages 4048-4055 | Received 19 Jun 2019, Accepted 16 Sep 2019, Published online: 04 Oct 2019
 

Abstract

Abbreviations
A=

Active

ABNR=

Adopted basis Newton-Raphson

CARDs=

Caspase activation and recruitment domains

CTD=

C-terminal domain

dsRNA=

Double-stranded RNA

HEL1=

Helicase1

HEL2=

Helicase2

HEL2i=

Helicase2 insertion

MD=

Molecular dynamics

NA=

Inactive

P=

Pincer

PDB=

protein data bank

PME=

Particle mesh Ewald

RIG-I=

Retinoic acid-inducible gene-I

RMSD=

Root mean square deviation

RMSF=

Root mean square fluctuation

SD=

Steepest descent

TI=

Thermodynamic Integration

Communicated by Ramaswamy H. Sarma

Acknowledgement

AK thank MHRD, Govt. of. India for funding. We acknowledge support from the Science and Engineering Research Board (SERB, Govt of India), IIT Guwahati. Biomolecular Simulation Lab (BSL), Bioinformatics Facility (BIF) and PARAM-ISHAN of IIT Guwahati is gratefully acknowledged for providing the computing facility.

Disclosure statement

The authors declare no conflict of interest.

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