Figures & data
Table 1. Different viral metagenomic studies performed within veterinary science and a description of some of the findings of both known and novel viruses, as well as the method utilized in each respective study.
Kirkland
,
PD
,
Frost
,
MJ
,
Finlaison
,
DS
,
King
,
KR
,
Ridpath
,
JF
and
Gu
,
X
.
2007
.
Identification of a novel virus in pigs – Bungowannah virus: a possible new species of pestivirus
.
Virus Res
,
129
(
1
)
:
26
–
34
.
Kistler
,
AL
,
Gancz
,
A
,
Clubb
,
S
,
Skewes-Cox
,
P
,
Fischer
,
K
,
Sorber
,
K
,
Chiu
,
CY
,
Lublin
,
A
,
Mechani
,
S
Farnoushi
,
Y
.
2008
.
Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: identification of a candidate etiologic agent
.
Virol J
,
5
:
88
Honkavuori
,
KS
,
Shivaprasad
,
HL
,
Williams
,
BL
,
Quan
,
PL
,
Hornig
,
M
,
Street
,
C
,
Palacios
,
G
,
Hutchison
,
SK
,
Franca
,
M
Egholm
,
M
.
2008
.
Novel borna virus in psittacine birds with proventricular dilatation disease
.
Emerg Infect Dis
,
14
(
12
)
:
1883
–
1886
.
Ng
,
TF
,
Manire
,
C
,
Borrowman
,
K
,
Langer
,
T
,
Ehrhart
,
L
and
Breitbart
,
M
.
2009
.
Discovery of a novel single-stranded DNA virus from a sea turtle fibropapilloma by using viral metagenomics
.
J Virol
,
83
(
6
)
:
2500
–
2509
.
Blomström
,
AL
,
Widen
,
F
,
Hammer
,
AS
,
Belak
,
S
and
Berg
,
M
.
2010
.
Detection of a novel astrovirus in brain tissue of mink suffering from shaking mink syndrome by use of viral metagenomics
.
J Clin Microbiol
,
48
(
12
)
:
4392
–
4396
.
Blomström
,
AL
,
Belak
,
S
,
Fossum
,
C
,
McKillen
,
J
,
Allan
,
G
,
Wallgren
,
P
and
Berg
,
M
.
2009
.
Detection of a novel porcine boca-like virus in the background of porcine circovirus type 2 induced postweaning multisystemic wasting syndrome
.
Virus Res
,
146
(
1–2
)
:
125
–
129
.
Cox-Foster
,
DL
,
Conlan
,
S
,
Holmes
,
EC
,
Palacios
,
G
,
Evans
,
JD
,
Moran
,
NA
,
Quan
,
PL
,
Briese
,
T
,
Hornig
,
M
Geiser
,
DM
.
2007
.
A metagenomic survey of microbes in honey bee colony collapse disorder
.
Science
,
318
(
5848
)
:
283
–
287
.
Runckel
,
C
,
Flenniken
,
ML
,
Engel
,
JC
,
Ruby
,
JG
,
Ganem
,
D
,
Andino
,
R
and
DeRisi
,
JL
.
2011
.
Temporal analysis of the honey bee microbiome reveals four novel viruses and seasonal prevalence of known viruses, Nosema, Crithidia
.
PLoS ONE
,
6
(
6
)
:
e20656
Li
,
L
,
Victoria
,
JG
,
Wang
,
C
,
Jones
,
M
,
Fellers
,
GM
,
Kunz
,
TH
and
Delwart
,
E
.
2010
.
Bat guano virome: predominance of dietary viruses from insects and plants plus novel mammalian viruses
.
J Virol
,
84
(
14
)
:
6955
–
6965
.
Donaldson
,
EF
,
Haskew
,
AN
,
Gates
,
JE
,
Huynh
,
J
,
Moore
,
CJ
and
Frieman
,
MB
.
2010
.
Metagenomic analysis of the viromes of three North American bat species: viral diversity among different bat species that share a common habitat
.
J Virol
,
84
(
24
)
:
13004
–
13018
.
Blinkova
,
O
,
Victoria
,
J
,
Li
,
Y
,
Keele
,
BF
,
Sanz
,
C
,
Ndjango
,
JB
,
Peeters
,
M
,
Travis
,
D
,
Lonsdorf
,
EV
Wilson
,
ML
.
2010
.
Novel circular DNA viruses in stool samples of wild-living chimpanzees
.
J Gen Virol
,
91
(
Pt 1
)
:
74
–
86
.
Lauck
,
M
,
Hyeroba
,
D
,
Tumukunde
,
A
,
Weny
,
G
,
Lank
,
SM
,
Chapman
,
CA
,
O’Connor
,
DH
,
Friedrich
,
TC
and
Goldberg
,
TL
.
2011
.
Novel, divergent simian hemorrhagic fever viruses in a wild ugandan red colobus monkey discovered using direct pyrosequencing
.
PLoS One
,
6
(
4
)
:
e19056