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Brief Report

Molecular epidemiology of swinepox viruses circulating in India

, , , , , , , ORCID Icon, & ORCID Icon show all
Pages 1-10 | Received 31 Mar 2022, Accepted 18 Nov 2022, Published online: 05 Jan 2023

Figures & data

Figure 1. Map showing locations of clinical outbreaks of swinepox that occurred in two Indian states viz., Haryana, and Uttar Pradesh.

Figure 1. Map showing locations of clinical outbreaks of swinepox that occurred in two Indian states viz., Haryana, and Uttar Pradesh.

Table 1. Details of investigation carried out, farm history and sample collection details.

Table 2. Details of primers and GenBank accession number for the sequences submitted in the present study.

Figure 2. Swinepox lesions in Uttar Pradesh Outbreak. A-J: Landrace Cross; K and L: Desi black (nondescript) breed.

Figure 2. Swinepox lesions in Uttar Pradesh Outbreak. A-J: Landrace Cross; K and L: Desi black (nondescript) breed.

Figure 3. Swinepox lesions (M-T) observed in Yorkshire white pigs in Haryana state.

Figure 3. Swinepox lesions (M-T) observed in Yorkshire white pigs in Haryana state.

Table 3. Summary of differential nucleotide (SNPs, indel) and amino acid markers observed between SWPV of Indian and European-North American lineages.

Figure 4. Evolutionary relationships of ORF 001/ORF150 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 4. Evolutionary relationships of ORF 001/ORF150 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 5. Evolutionary relationships of ORF 005/ORF146 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 5. Evolutionary relationships of ORF 005/ORF146 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 6. Evolutionary relationships of ORF 007 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 6. Evolutionary relationships of ORF 007 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 7. Evolutionary relationships of ORF 119 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 7. Evolutionary relationships of ORF 119 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 8. Evolutionary relationships of ORF ORF120 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.

Figure 8. Evolutionary relationships of ORF ORF120 of Indian SWPV with the USA, and Germany SWPV isolates. The isolates of the current study are shown in bold letters.
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