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Articles

Bioinformatics analysis and tissue-specific expression of intestinal-type fatty acid binding protein in domestic pigeons (Columba livia)

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Pages 102-108 | Received 19 Nov 2019, Accepted 19 Feb 2020, Published online: 05 Mar 2020

Figures & data

Table 1. Primers sequences of PCR amplification of pigeon FABP2a gene.

Table 2. Amino acid sequences encoded by different species of FABP2 genes.

Table 3. Primers sequences of Real-time PCR.

Figure 1. Multiple sequence alignment of FABP2 amino acid sequences in the eighteen species. ‘*’ represents identical aa, ‘:’, and ‘.’ are highly and relative highly conserved aa.

Figure 1. Multiple sequence alignment of FABP2 amino acid sequences in the eighteen species. ‘*’ represents identical aa, ‘:’, and ‘.’ are highly and relative highly conserved aa.

Figure 2. Phylogenetic tree draw with Neighbor-Joining method based on pigeon and the known FABP2 protein. The tree was obtained by boot strap analysis with the neighbor-joining method; number on the branches represent bootstrap values for 1000 replications.

Figure 2. Phylogenetic tree draw with Neighbor-Joining method based on pigeon and the known FABP2 protein. The tree was obtained by boot strap analysis with the neighbor-joining method; number on the branches represent bootstrap values for 1000 replications.

Figure 3. Amino acid sequence-based homology percent Identity matrix analysis for FABP2 and homologous proteins was created by Clustal2.

Figure 3. Amino acid sequence-based homology percent Identity matrix analysis for FABP2 and homologous proteins was created by Clustal2.

Figure 4. The tertiary structures of Fabp2. The α-helices are highlighted in purple, the β-strands in green and the coils in white.

Figure 4. The tertiary structures of Fabp2. The α-helices are highlighted in purple, the β-strands in green and the coils in white.

Figure 5. Relative expression levels of FABP2 in various tissues and different periods of age.

Figure 5. Relative expression levels of FABP2 in various tissues and different periods of age.