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Research Article

High-throughput simple sequence repeat (SSR) mining saturates the carrot (Daucus carota L.) genome with chromosome-anchored markers

ORCID Icon & ORCID Icon
Pages 1-9 | Received 01 Oct 2019, Accepted 02 Dec 2019, Published online: 10 Dec 2019

Figures & data

Table 1. Simple sequence repeat (SSR) types in the carrot genome.

Table 2. Most abundant simple sequence repeat (SSR) motifs.

Table 3. Statistics on simple sequence repeat (SSR) marker numbers and locations in the carrot genome assembly.

Table 4. Statistics of cross-species marker transferability to fennel genome assembly.

Figure 1. A set of polymorphic marker fragments visualized by high-resolution capillary electrophoresis. Electropherograms of different size alleles amplified from carrot landraces are displayed for each marker. Primer sequences of markers can be accessed at https://figshare.com/articles/Marker_data/8593337/2.

Figure 1. A set of polymorphic marker fragments visualized by high-resolution capillary electrophoresis. Electropherograms of different size alleles amplified from carrot landraces are displayed for each marker. Primer sequences of markers can be accessed at https://figshare.com/articles/Marker_data/8593337/2.

Table 5. Informativeness of the codominant, polymorphic markers.

Data availability statement

All data generated during this study are available at Figshare (https://doi.org/10.6084/m9.figshare.8593337).