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Research Article

Macrocyclic inhibitors for the serine protease plasmin

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Pages 779-794 | Received 13 Feb 2008, Accepted 10 Jul 2008, Published online: 01 Jun 2009

Figures & data

Figure 1. Structure of inhibitor 1.

Figure 1.  Structure of inhibitor 1.

Figure 2. Macrocyclic protease inhibitors.

Figure 2.  Macrocyclic protease inhibitors.

Figure 3. Development of the macrocyclic inhibitors 10 and 11.

Figure 3.  Development of the macrocyclic inhibitors 10 and 11.

Scheme 1. Reagents and conditions: (a) Boc-aa-OH, HBTU, DIEA, rt, 2 h (86-99%); (b) TFA/CH2Cl2 (1:2), rt, 30 min; (c) 20% K2CO3, 5-bromopentanoyl chloride, rt, 8 min; (d) NaI, acetone, reflux, 2 h (88-100%); (e) K2CO3, rt, 10 h (50-75%); (f) H2, Pd(OH)2/C, rt, 4 h; (g) 16, HBTU, DIEA, rt, 24 h (60-80%); (h) TFA/H2O (1:2), rt, 12 h (50-65%). Compounds 13c, 13d and 13f were not isolated in pure form, but instead the crude materials were used directly in the next reaction. Compounds 17a-j and 10a-j are 1:1 mixtures of two diastereomers where the stereochemistry of the R substituent is defined, but the stereocenter on the cyclohexane ring is not.

Scheme 1.  Reagents and conditions: (a) Boc-aa-OH, HBTU, DIEA, rt, 2 h (86-99%); (b) TFA/CH2Cl2 (1:2), rt, 30 min; (c) 20% K2CO3, 5-bromopentanoyl chloride, rt, 8 min; (d) NaI, acetone, reflux, 2 h (88-100%); (e) K2CO3, rt, 10 h (50-75%); (f) H2, Pd(OH)2/C, rt, 4 h; (g) 16, HBTU, DIEA, rt, 24 h (60-80%); (h) TFA/H2O (1:2), rt, 12 h (50-65%). Compounds 13c, 13d and 13f were not isolated in pure form, but instead the crude materials were used directly in the next reaction. Compounds 17a-j and 10a-j are 1:1 mixtures of two diastereomers where the stereochemistry of the R substituent is defined, but the stereocenter on the cyclohexane ring is not.

Scheme 2. (a) LDA (2 equiv), 0°C, then 1-bromo-4-butene, rt, 30 h (78%); (b) 2 N NaOH:MeOH (1:1), reflux, 24 h (90%); (c) 1,3-propanediol, TMSCl, 0°C to rt, 48 h (95%); (d) NaIO4, KMnO4, NaHCO3, acetone/water (2:1), rt, 4 h (90%).

Scheme 2.  (a) LDA (2 equiv), 0°C, then 1-bromo-4-butene, rt, 30 h (78%); (b) 2 N NaOH:MeOH (1:1), reflux, 24 h (90%); (c) 1,3-propanediol, TMSCl, 0°C to rt, 48 h (95%); (d) NaIO4, KMnO4, NaHCO3, acetone/water (2:1), rt, 4 h (90%).

Scheme 3. (a) 5-amino-1-hexanol, HBTU, DIEA, rt, 2 h (95%); (b) TsCl, pyridine, rt, 2 h (97%); (c) NaH, rt, 2 d (30%); (d) TFA/CH2Cl2 (1:2), rt, 30 min; (e) 22, HBTU, DIEA, rt, 2 h (70% for two steps); (f) TFA/H2O (1:2), rt, 12 h (55%).

Scheme 3.  (a) 5-amino-1-hexanol, HBTU, DIEA, rt, 2 h (95%); (b) TsCl, pyridine, rt, 2 h (97%); (c) NaH, rt, 2 d (30%); (d) TFA/CH2Cl2 (1:2), rt, 30 min; (e) 22, HBTU, DIEA, rt, 2 h (70% for two steps); (f) TFA/H2O (1:2), rt, 12 h (55%).

Figure 4. Assay results for inhibitors 10a-j (250 μM) against plasmin. The R group in each inhibitor is defined by the side chain of the amino acid shown on the x-axis of the plot. The data are an average of three independent measurements.

Figure 4.  Assay results for inhibitors 10a-j (250 μM) against plasmin. The R group in each inhibitor is defined by the side chain of the amino acid shown on the x-axis of the plot. The data are an average of three independent measurements.

Table I. IC50 values of inhibitors 10c, 10d and 10h against plasmin.

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